BLASTX nr result

ID: Dioscorea21_contig00016618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016618
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329688.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002268448.2| PREDICTED: receptor-like protein 12-like [Vi...   118   4e-25
emb|CBI17238.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN71913.1| hypothetical protein VITISV_032859 [Vitis vinifera]   117   1e-24
ref|XP_002268274.1| PREDICTED: receptor-like protein kinase 5-li...   115   4e-24

>ref|XP_002329688.1| predicted protein [Populus trichocarpa] gi|222870596|gb|EEF07727.1|
            predicted protein [Populus trichocarpa]
          Length = 938

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
 Frame = -1

Query: 425  GTIPSSISTLNFLAYLNVSHNNLSGKIPSGTQLQSFDQSSYNWNHGLCGSPL-QNC-ANE 252
            G IPSS ++L+FL+YLN+S+NNLSGKIPSGTQLQSF+ S++  N  LCG P+   C  +E
Sbjct: 794  GVIPSSTASLSFLSYLNLSYNNLSGKIPSGTQLQSFNASAFAGNLALCGLPVTHKCPGDE 853

Query: 251  TNPPALYDEDWKGDWAEM----LWLFIGFAMGFITGFWMIIGTIISKQTIRIVYFRSIDK 84
              P  L ++D +G+   +     W +    +GF   FW + G ++ K++ R  YFR +D+
Sbjct: 854  ATPRPLANDDNQGNETVVDEFRRWFYTALGIGFGVFFWGVSGALLLKRSWRHAYFRFLDE 913

Query: 83   VYDWIYVKAVVYSRRLKSTFSR 18
             +DWIYVK  V   RL+  + R
Sbjct: 914  AWDWIYVKIAVQKARLQHIYQR 935


>ref|XP_002268448.2| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1022

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/133 (42%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = -1

Query: 425  GTIPSSISTLNFLAYLNVSHNNLSGKIPSGTQLQSFDQSSYNWNHGLCGSPL-QNCANET 249
            G IP S+  L+FL++LN+S+NN SG+IPS TQLQSFD+ SY  N  LCG PL +NC  + 
Sbjct: 727  GEIPQSMKNLSFLSHLNLSYNNFSGRIPSSTQLQSFDEISYIGNAELCGVPLTKNCTEDE 786

Query: 248  NPPALYDEDWKGDWAEMLWLFIGFAMGFITGFWMIIGTIISKQTIRIVYFRSIDKVYDWI 69
            +   +   D   + +E+ W +IG  +GFI GFW + G ++ K+  R  YF+ + +V DW+
Sbjct: 787  DFQGIDVIDENEEGSEIPWFYIGMGLGFIVGFWGVCGALLFKKAWRHAYFQFLYRVKDWV 846

Query: 68   YVKAVVYSRRLKS 30
            YV   +   RL++
Sbjct: 847  YVAIAIRLNRLQN 859


>emb|CBI17238.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
 Frame = -1

Query: 425 GTIPSSISTLNFLAYLNVSHNNLSGKIPSGTQLQSFDQSSYNWNHGLCGSPL-QNCANET 249
           G IP S+  L+FL++LN+S+NN SG+IPS TQLQSFD  SY  N  LCG PL +NC  + 
Sbjct: 516 GEIPQSMKNLSFLSHLNLSYNNFSGRIPSSTQLQSFDAISYIGNAELCGVPLTKNCTEDE 575

Query: 248 NPPALYDEDWKGDWAEMLWLFIGFAMGFITGFWMIIGTIISKQTIRIVYFRSIDKVYDWI 69
           +   +   D   + +E+ W +IG  +GFI GFW + G ++ K+  R  YF+ + +V DW+
Sbjct: 576 DFQGIDVIDENEEGSEIPWFYIGMGLGFIVGFWGVCGALLFKKAWRHAYFQFLYRVKDWV 635

Query: 68  YVKAVVYSRRLKS 30
           YV   +   RL++
Sbjct: 636 YVAIAIRLNRLQN 648


>emb|CAN71913.1| hypothetical protein VITISV_032859 [Vitis vinifera]
          Length = 813

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
 Frame = -1

Query: 425  GTIPSSISTLNFLAYLNVSHNNLSGKIPSGTQLQSFDQSSYNWNHGLCGSPL-QNCANET 249
            G IP S+  L+FL++LN+S+NN SG+IPS TQLQSFD  SY  N  LCG PL +NC  + 
Sbjct: 671  GEIPQSMKNLSFLSHLNLSYNNFSGRIPSSTQLQSFDXISYIGNAELCGVPLTKNCTEDE 730

Query: 248  NPPALYDEDWKGDWAEMLWLFIGFAMGFITGFWMIIGTIISKQTIRIVYFRSIDKVYDWI 69
            +   +   D   + +E+ W +IG  +GFI GFW + G ++ K+  R  YF+ + +V DW+
Sbjct: 731  DFQGIDVIDENEEGSEIPWFYIGMGLGFIVGFWGVCGALLFKKAWRHAYFQFLYRVKDWV 790

Query: 68   YVKAVVYSRRLKS 30
            YV   +   RL++
Sbjct: 791  YVAIAIRLNRLQN 803


>ref|XP_002268274.1| PREDICTED: receptor-like protein kinase 5-like [Vitis vinifera]
          Length = 870

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/137 (41%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
 Frame = -1

Query: 425  GTIPSSISTLNFLAYLNVSHNNLSGKIPSGTQLQSFDQSSYNWNHGLCGSPL-QNCANET 249
            G IP SI+ L FL+YLNVS+NN SG+IPS TQLQS D  S+  N  LCG+PL +NC  + 
Sbjct: 718  GEIPQSIANLTFLSYLNVSYNNFSGRIPSSTQLQSLDPLSFFGNAELCGAPLTKNCTKDE 777

Query: 248  NPPALYDEDWKGDWAEMLWLFIGFAMGFITGFWMIIGTIISKQTIRIVYFRSIDKVYDWI 69
             P     ++   +  E+ W +IG   GF+ GFW + G +  K+  R  YFR +D + D +
Sbjct: 778  EPQDTNTDEESREHPEIAWFYIGMGTGFVVGFWGVCGALFFKRAWRHAYFRVLDDMKDRV 837

Query: 68   YVKAVVYSRRLKSTFSR 18
            YV   +  + L++   R
Sbjct: 838  YVVIALRLKWLQNNLRR 854


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