BLASTX nr result

ID: Dioscorea21_contig00016611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016611
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15756.3| unnamed protein product [Vitis vinifera]              135   1e-39
ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   135   1e-39
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   135   1e-38
emb|CBI29257.3| unnamed protein product [Vitis vinifera]              132   5e-38
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   132   5e-38

>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  135 bits (341), Expect(2) = 1e-39
 Identities = 65/76 (85%), Positives = 69/76 (90%)
 Frame = -2

Query: 228 NVEDSELRALFEQYGDISTLYTTCKHRGFVMISYYDIRAARNAMVALQNKPLGHRKLDIH 49
           NVEDSELR LFEQYGDI TLYT CKHRGFVMISYYDIRAARNAM ALQNKPL  RKLDIH
Sbjct: 290 NVEDSELRDLFEQYGDIRTLYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIH 349

Query: 48  FSIPKDNPSGRDLDQG 1
           +SIPKDNPS +D++QG
Sbjct: 350 YSIPKDNPSEKDINQG 365



 Score = 54.3 bits (129), Expect(2) = 1e-39
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -3

Query: 425 RSSEFVGGENVNDQDGGLSSRLASEHPNGEHPSRTLFVRNIN 300
           R S+F GG  + +  GG +  LASEHP GEHPSRTLFVRNIN
Sbjct: 249 RHSDFNGG--IPNSQGGSNGSLASEHPYGEHPSRTLFVRNIN 288


>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  135 bits (341), Expect(2) = 1e-39
 Identities = 65/76 (85%), Positives = 69/76 (90%)
 Frame = -2

Query: 228 NVEDSELRALFEQYGDISTLYTTCKHRGFVMISYYDIRAARNAMVALQNKPLGHRKLDIH 49
           NVEDSELR LFEQYGDI TLYT CKHRGFVMISYYDIRAARNAM ALQNKPL  RKLDIH
Sbjct: 284 NVEDSELRDLFEQYGDIRTLYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIH 343

Query: 48  FSIPKDNPSGRDLDQG 1
           +SIPKDNPS +D++QG
Sbjct: 344 YSIPKDNPSEKDINQG 359



 Score = 54.3 bits (129), Expect(2) = 1e-39
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -3

Query: 425 RSSEFVGGENVNDQDGGLSSRLASEHPNGEHPSRTLFVRNIN 300
           R S+F GG  + +  GG +  LASEHP GEHPSRTLFVRNIN
Sbjct: 243 RHSDFNGG--IPNSQGGSNGSLASEHPYGEHPSRTLFVRNIN 282


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
           gi|223550206|gb|EEF51693.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 972

 Score =  135 bits (341), Expect(2) = 1e-38
 Identities = 64/76 (84%), Positives = 70/76 (92%)
 Frame = -2

Query: 228 NVEDSELRALFEQYGDISTLYTTCKHRGFVMISYYDIRAARNAMVALQNKPLGHRKLDIH 49
           NVEDSEL+ALFEQYGDI TLYT CKHRGFVMISYYDIRAARNAM +LQNKPL  RKLDIH
Sbjct: 283 NVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARNAMRSLQNKPLRRRKLDIH 342

Query: 48  FSIPKDNPSGRDLDQG 1
           +SIPKDNPS +D++QG
Sbjct: 343 YSIPKDNPSEKDINQG 358



 Score = 50.8 bits (120), Expect(2) = 1e-38
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = -3

Query: 425 RSSEFVGGENVNDQDGGLSSRLASEHPNGEHPSRTLFVRNIN 300
           R+S+FVG   +++  GG +  +  EHP GEHPSRTLFVRNIN
Sbjct: 242 RNSDFVGA--LSNLQGGSNGSVVGEHPYGEHPSRTLFVRNIN 281


>emb|CBI29257.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score =  132 bits (331), Expect(2) = 5e-38
 Identities = 63/76 (82%), Positives = 67/76 (88%)
 Frame = -2

Query: 228 NVEDSELRALFEQYGDISTLYTTCKHRGFVMISYYDIRAARNAMVALQNKPLGHRKLDIH 49
           NVEDSELR LFEQYGDI  LYT CKHRGFVMISYYDIRAARNAM ALQNKPL  RKLDIH
Sbjct: 281 NVEDSELRILFEQYGDIRALYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIH 340

Query: 48  FSIPKDNPSGRDLDQG 1
           +SIPKDNP  +D++QG
Sbjct: 341 YSIPKDNPPEKDVNQG 356



 Score = 52.8 bits (125), Expect(2) = 5e-38
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = -3

Query: 446 DDKNGCYRSSEFVGGENVNDQDGGLSSRLASEHPNGEHPSRTLFVRNIN 300
           D  +   R+SE+ GG + N Q GG +     EHP GEHPSRTLFVRNIN
Sbjct: 232 DGSSAGQRNSEYPGGMS-NGQLGGSNGSAVGEHPYGEHPSRTLFVRNIN 279



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 31/90 (34%), Positives = 50/90 (55%)
 Frame = -2

Query: 930 WRAPDRNFHFQSNRPVEPEPLYMEGNKVDMNRVHHEHVLFSSSLPAMFNKKLKLTSDDAP 751
           WR  + +   +SN  V     +MEG+K++M    +E+ LFSSSL  +FN+KL+L+S++  
Sbjct: 97  WRTVEHDLGTRSNANVHSASYFMEGDKINMTGSQYENGLFSSSLSELFNRKLRLSSNNGL 156

Query: 750 FGQSIASAHSIYXXXXXXXXXXXXEAQTIG 661
           +G S+ +    +            EAQTIG
Sbjct: 157 YGHSVDTVAPHHEEEDLFESLEEIEAQTIG 186


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  132 bits (331), Expect(2) = 5e-38
 Identities = 63/76 (82%), Positives = 67/76 (88%)
 Frame = -2

Query: 228 NVEDSELRALFEQYGDISTLYTTCKHRGFVMISYYDIRAARNAMVALQNKPLGHRKLDIH 49
           NVEDSELR LFEQYGDI  LYT CKHRGFVMISYYDIRAARNAM ALQNKPL  RKLDIH
Sbjct: 260 NVEDSELRILFEQYGDIRALYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIH 319

Query: 48  FSIPKDNPSGRDLDQG 1
           +SIPKDNP  +D++QG
Sbjct: 320 YSIPKDNPPEKDVNQG 335



 Score = 52.8 bits (125), Expect(2) = 5e-38
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = -3

Query: 446 DDKNGCYRSSEFVGGENVNDQDGGLSSRLASEHPNGEHPSRTLFVRNIN 300
           D  +   R+SE+ GG + N Q GG +     EHP GEHPSRTLFVRNIN
Sbjct: 211 DGSSAGQRNSEYPGGMS-NGQLGGSNGSAVGEHPYGEHPSRTLFVRNIN 258


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