BLASTX nr result

ID: Dioscorea21_contig00016607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016607
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    82   4e-14
ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group] g...    82   4e-14
gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sat...    82   4e-14
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    82   4e-14
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = -1

Query: 200  DVDEISNVLKKRFSSPELVCLALDACSVKVSKSLIDKILRRFNNNWISAFGFFKWVDNQ 24
            D+DE+S +L  RF+SPE + +A+D CSV+V+  L+DKIL RF+N+W++AFGFF WV  Q
Sbjct: 1421 DIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQ 1479


>ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
           gi|113549720|dbj|BAF13163.1| Os03g0746400, partial
           [Oryza sativa Japonica Group]
          Length = 613

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = -1

Query: 200 DVDEISNVLKKRFSSPELVCLALDACSVKVSKSLIDKILRRFNNNWISAFGFFKWVDNQ 24
           D+DE+S +L  RF+SPE + +A+D CSV+V+  L+DKIL RF+N+W++AFGFF WV  Q
Sbjct: 160 DIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQ 218


>gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|215693326|dbj|BAG88708.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|222625789|gb|EEE59921.1| hypothetical protein
           OsJ_12549 [Oryza sativa Japonica Group]
          Length = 554

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = -1

Query: 200 DVDEISNVLKKRFSSPELVCLALDACSVKVSKSLIDKILRRFNNNWISAFGFFKWVDNQ 24
           D+DE+S +L  RF+SPE + +A+D CSV+V+  L+DKIL RF+N+W++AFGFF WV  Q
Sbjct: 101 DIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQ 159


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 47/59 (79%)
 Frame = -1

Query: 200  DVDEISNVLKKRFSSPELVCLALDACSVKVSKSLIDKILRRFNNNWISAFGFFKWVDNQ 24
            D+DE+S +L  RF+SPE + +A+D CSV+V+  L+DKIL RF+N+W++AFGFF WV  Q
Sbjct: 1380 DIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQ 1438


>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/69 (49%), Positives = 49/69 (71%)
 Frame = -1

Query: 215 EIVDDDVDEISNVLKKRFSSPELVCLALDACSVKVSKSLIDKILRRFNNNWISAFGFFKW 36
           E +D D+D+IS +LK R SS + V  AL  C V VS+SL++++L+RF+N+WI AFGFFKW
Sbjct: 83  ETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKW 142

Query: 35  VDNQPEFNN 9
              Q  + +
Sbjct: 143 AKAQTGYRH 151


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