BLASTX nr result

ID: Dioscorea21_contig00016598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016598
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    92   3e-17
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    88   6e-16
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    88   8e-16
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    87   1e-15
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    86   4e-15

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/105 (41%), Positives = 65/105 (61%)
 Frame = -1

Query: 354 LARVDMTPHRLFPLGAGDIGCAHIVQREEDIADLWHKRYGHXXXXXXXXXXXXXLVHGIP 175
           +ARV MT +++FPL   ++G + +V +E++  +LWH RYGH             +V G+P
Sbjct: 411 IARVPMTQNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLP 470

Query: 174 TITTLEPCESCSLGKQTRMMYPKGQTRRASPPLELVHGDIVGPMQ 40
            I  L+ CE C  GKQTR  +P G++ RA+  LELVH D+ GPM+
Sbjct: 471 NIKELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMK 515


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/106 (39%), Positives = 61/106 (57%)
 Frame = -1

Query: 354 LARVDMTPHRLFPLGAGDIGCAHIVQREEDIADLWHKRYGHXXXXXXXXXXXXXLVHGIP 175
           +  V M  ++LFPL    I    +V +E   ++LWH RYGH             +V G+P
Sbjct: 406 IVNVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLP 465

Query: 174 TITTLEPCESCSLGKQTRMMYPKGQTRRASPPLELVHGDIVGPMQT 37
            I ++  CE C  GKQ++  +PKG++RRAS  LE++H D+ GPMQT
Sbjct: 466 KIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQT 511


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/106 (39%), Positives = 61/106 (57%)
 Frame = -1

Query: 354 LARVDMTPHRLFPLGAGDIGCAHIVQREEDIADLWHKRYGHXXXXXXXXXXXXXLVHGIP 175
           +  V M  ++LFPL    I    +V +E   ++LWH RYGH             +V G+P
Sbjct: 391 IVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLP 450

Query: 174 TITTLEPCESCSLGKQTRMMYPKGQTRRASPPLELVHGDIVGPMQT 37
            I ++  CE C  GKQ++  +PKG++RRAS  LE++H D+ GPMQT
Sbjct: 451 KIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQT 496


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/103 (40%), Positives = 60/103 (58%)
 Frame = -1

Query: 345 VDMTPHRLFPLGAGDIGCAHIVQREEDIADLWHKRYGHXXXXXXXXXXXXXLVHGIPTIT 166
           V M  ++LFPL    I    +V +E   ++LWH RYGH             +V G+P I 
Sbjct: 343 VRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKID 402

Query: 165 TLEPCESCSLGKQTRMMYPKGQTRRASPPLELVHGDIVGPMQT 37
           ++  CE C  GKQ++  +PKG++RRAS  LE++H D+ GPMQT
Sbjct: 403 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQT 445


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/102 (40%), Positives = 59/102 (57%)
 Frame = -1

Query: 345 VDMTPHRLFPLGAGDIGCAHIVQREEDIADLWHKRYGHXXXXXXXXXXXXXLVHGIPTIT 166
           V M  ++LFPL    I    +V +E   ++LWH RYGH             +V G+P I 
Sbjct: 395 VRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKID 454

Query: 165 TLEPCESCSLGKQTRMMYPKGQTRRASPPLELVHGDIVGPMQ 40
           ++  CE C  GKQ++  +PKG++RRAS  LE++H D+ GPMQ
Sbjct: 455 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 496


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