BLASTX nr result

ID: Dioscorea21_contig00016575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016575
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42281.1| unknown [Lotus japonicus]                              116   6e-24
gb|EAY73493.1| hypothetical protein OsI_01376 [Oryza sativa Indi...   116   8e-24
ref|NP_001042725.1| Os01g0276100 [Oryza sativa Japonica Group] g...   116   8e-24
gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subu...   115   2e-23
emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...   114   2e-23

>gb|AFK42281.1| unknown [Lotus japonicus]
          Length = 359

 Score =  116 bits (291), Expect = 6e-24
 Identities = 73/149 (48%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
 Frame = +3

Query: 462 EEIKVVGRPSCRRVAELQAGGRSAGGREMRPAAAENRISRIGDWPALVF--EQGELWPAL 635
           E +K++ R +  RVAE       A GRE   A  +  I +  D   L    E  E +P +
Sbjct: 163 ESLKIITRQASLRVAEYAFHYAKAHGRERVSAVHKANIMQKTDGLFLKCCREVAEKYPEI 222

Query: 636 VKLRRQLVGCGGGEQRRKNQVXXXXXXXXXXXVKNPSLFDVLVMPNLYGDIISDLCAGLI 815
                 +  C                      VKNP+LFDVLVMPNLYGDIISDLCAGLI
Sbjct: 223 TYEEVVIDNC------------------CMMLVKNPALFDVLVMPNLYGDIISDLCAGLI 264

Query: 816 GGLGLTPSCNIGEDGIILAEAVHGSAPDI 902
           GGLGLTPSCNIGE GI+LAEAVHGSAPDI
Sbjct: 265 GGLGLTPSCNIGEGGIVLAEAVHGSAPDI 293


>gb|EAY73493.1| hypothetical protein OsI_01376 [Oryza sativa Indica Group]
          Length = 362

 Score =  116 bits (290), Expect = 8e-24
 Identities = 74/149 (49%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
 Frame = +3

Query: 462 EEIKVVGRPSCRRVAELQAGGRSAGGREMRPAAAENRISRIGDWPALVF--EQGELWPAL 635
           E +K++ R +  RVAE         GRE   A  +  I R  D   L    E  E +P +
Sbjct: 166 ESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEI 225

Query: 636 VKLRRQLVGCGGGEQRRKNQVXXXXXXXXXXXVKNPSLFDVLVMPNLYGDIISDLCAGLI 815
           V     +  C                      VKNP LFDVLVMPNLYGDIISDLCAGLI
Sbjct: 226 VYEEVIIDNC------------------CMTLVKNPGLFDVLVMPNLYGDIISDLCAGLI 267

Query: 816 GGLGLTPSCNIGEDGIILAEAVHGSAPDI 902
           GGLGLTPSCNIGE GI LAEAVHGSAPDI
Sbjct: 268 GGLGLTPSCNIGEGGICLAEAVHGSAPDI 296


>ref|NP_001042725.1| Os01g0276100 [Oryza sativa Japonica Group]
           gi|6539562|dbj|BAA88179.1| putative isocitrate
           dehydrogenase [Oryza sativa Japonica Group]
           gi|81686717|dbj|BAE48299.1| NAD-dependent isocitrate
           dehydrogenase a [Oryza sativa Japonica Group]
           gi|113532256|dbj|BAF04639.1| Os01g0276100 [Oryza sativa
           Japonica Group] gi|125569901|gb|EAZ11416.1| hypothetical
           protein OsJ_01284 [Oryza sativa Japonica Group]
           gi|215765348|dbj|BAG87045.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 362

 Score =  116 bits (290), Expect = 8e-24
 Identities = 74/149 (49%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
 Frame = +3

Query: 462 EEIKVVGRPSCRRVAELQAGGRSAGGREMRPAAAENRISRIGDWPALVF--EQGELWPAL 635
           E +K++ R +  RVAE         GRE   A  +  I R  D   L    E  E +P +
Sbjct: 166 ESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKCCREVAEKYPEI 225

Query: 636 VKLRRQLVGCGGGEQRRKNQVXXXXXXXXXXXVKNPSLFDVLVMPNLYGDIISDLCAGLI 815
           V     +  C                      VKNP LFDVLVMPNLYGDIISDLCAGLI
Sbjct: 226 VYEEVIIDNC------------------CMTLVKNPGLFDVLVMPNLYGDIISDLCAGLI 267

Query: 816 GGLGLTPSCNIGEDGIILAEAVHGSAPDI 902
           GGLGLTPSCNIGE GI LAEAVHGSAPDI
Sbjct: 268 GGLGLTPSCNIGEGGICLAEAVHGSAPDI 296


>gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica
           napus] gi|28974494|gb|AAO61643.1| NAD-dependent
           isocitrate dehydrogenase alpha subunit [Brassica napus]
           gi|28974496|gb|AAO61644.1| NAD-dependent isocitrate
           dehydrogenase alpha subunit [Brassica napus]
          Length = 330

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/149 (47%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
 Frame = +3

Query: 462 EEIKVVGRPSCRRVAELQAGGRSAGGREMRPAAAENRISRIGDWPALVF--EQGELWPAL 635
           E +K++ R +  RVAE         GRE   A  +  I +  D   L    E  E +P +
Sbjct: 134 ESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI 193

Query: 636 VKLRRQLVGCGGGEQRRKNQVXXXXXXXXXXXVKNPSLFDVLVMPNLYGDIISDLCAGLI 815
                 +  C                      VKNP+LFDVLVMPNLYGDIISDLCAGL+
Sbjct: 194 TYEEVVIDNC------------------CMMLVKNPALFDVLVMPNLYGDIISDLCAGLV 235

Query: 816 GGLGLTPSCNIGEDGIILAEAVHGSAPDI 902
           GGLGLTPSCNIGEDG+ LAEAVHGSAPDI
Sbjct: 236 GGLGLTPSCNIGEDGVALAEAVHGSAPDI 264


>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
           gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
           dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score =  114 bits (286), Expect = 2e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = +3

Query: 732 VKNPSLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEDGIILAEAVHGSAPDI 902
           VKNP+LFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEDG+ LAEAVHGSAPDI
Sbjct: 250 VKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDI 306


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