BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016574
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox...   177   6e-43
gb|AFK48034.1| unknown [Lotus japonicus]                              174   9e-42
emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subu...   173   1e-41
ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chai...   172   3e-41
ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chai...   171   7e-41

>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|3044116|gb|AAC13293.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Medicago sativa]
          Length = 180

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/107 (84%), Positives = 96/107 (89%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 MISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMKVWP 144
           +ISS AVTTVNRAS AQA  VAPFTGLKS AGFPVTKK NNDITSIASNG RVNCM+VWP
Sbjct: 3   LISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWP 62

Query: 143 VEGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFALEKGFVY 3
             GKKKFETLSYLPPLT EQLA+EV+YL+RKGW+PCLEF LEKGFVY
Sbjct: 63  PVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVY 109


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/106 (81%), Positives = 93/106 (87%), Gaps = 2/106 (1%)
 Frame = -3

Query: 314 MISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMKVWPV 141
           MI+S+AVTT+N ASPAQA  VAPFTGLKSMAGFPV K NNDITSIA+NG RV CM+VWP 
Sbjct: 5   MITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQVWPP 64

Query: 140 EGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFALEKGFVY 3
            GKKKFETLSYLPPLT EQL +EV+YLLRKGWVPCLEF  EKGFVY
Sbjct: 65  IGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVY 110


>emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subunit [Cicer
           arietinum]
          Length = 181

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/106 (82%), Positives = 93/106 (87%), Gaps = 2/106 (1%)
 Frame = -3

Query: 314 MISSTAVTTVNRAS--PAQAVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMKVWPV 141
           MISS+AVTTV RAS  P+ AVAPF GLKSMAGFPV K NNDITSIASNG RV+CM+VWP 
Sbjct: 5   MISSSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPP 64

Query: 140 EGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFALEKGFVY 3
            GKKKFETLSYLPPLT EQL +EV+YLLRKGWVPCLEF LEKGFVY
Sbjct: 65  IGKKKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEFELEKGFVY 110


>ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|217071562|gb|ACJ84141.1| unknown [Medicago
           truncatula] gi|355493751|gb|AES74954.1| Ribulose
           bisphosphate carboxylase small chain [Medicago
           truncatula]
          Length = 180

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/107 (82%), Positives = 94/107 (87%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 MISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMKVWP 144
           +ISS AVTTV+RAS  QA  VAPFTGLKS A FPVTKK NNDITSIASNG RVNCM+VWP
Sbjct: 3   LISSAAVTTVSRASSTQANLVAPFTGLKSSAAFPVTKKTNNDITSIASNGGRVNCMQVWP 62

Query: 143 VEGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFALEKGFVY 3
             GKKKFETLSYLPPLT EQLA+EV+YL+RKGWVPCLEF LEKGFVY
Sbjct: 63  PIGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEFELEKGFVY 109


>ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355503778|gb|AES84981.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 181

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/106 (81%), Positives = 91/106 (85%), Gaps = 2/106 (1%)
 Frame = -3

Query: 314 MISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMKVWPV 141
           MISS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCM+VWP 
Sbjct: 5   MISSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVWPP 64

Query: 140 EGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFALEKGFVY 3
            GKKKFETLSYLPPLT EQLA+EV+YL+RKGWV CLEF  EKGFVY
Sbjct: 65  IGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEFETEKGFVY 110