BLASTX nr result

ID: Dioscorea21_contig00016571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016571
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   269   3e-70
ref|XP_003558429.1| PREDICTED: AP-3 complex subunit sigma-like [...   263   2e-68
gb|EEE58638.1| hypothetical protein OsJ_10010 [Oryza sativa Japo...   255   5e-66
ref|NP_001049451.1| Os03g0228400 [Oryza sativa Japonica Group] g...   255   5e-66
ref|XP_002465603.1| hypothetical protein SORBIDRAFT_01g041930 [S...   253   3e-65

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  269 bits (688), Expect = 3e-70
 Identities = 126/162 (77%), Positives = 151/162 (93%)
 Frame = -3

Query: 653 MIRAVIVMNTQGKPRLTKFYDFQPPEKQQEMIRKVYGVLSNRPENVSNFIQADDIFGPDC 474
           MIRAVIVMNTQGKPRLTKFYD+ PPEKQQE+IR+V+GVL +R ENVSNF++AD +FGPD 
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 473 KIVYKHLATLYFIFVFDSSENELAMLDLIQVFVETLDRCFKNVCELDVVFNFNKLHTILN 294
           ++VYKH ATLYF+FVFDSSENELAMLDLIQV VETLD+CFKNVCELD+VFN++KLHTIL+
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD 120

Query: 293 EIILGGQVLETSSEEVMKAIEEISRLEKSTSAVSLIPKAVSG 168
           EII GGQVLETSS EVMKA+EEISRLE +++ ++L+PK++SG
Sbjct: 121 EIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISG 162


>ref|XP_003558429.1| PREDICTED: AP-3 complex subunit sigma-like [Brachypodium
           distachyon]
          Length = 166

 Score =  263 bits (672), Expect = 2e-68
 Identities = 122/166 (73%), Positives = 152/166 (91%)
 Frame = -3

Query: 653 MIRAVIVMNTQGKPRLTKFYDFQPPEKQQEMIRKVYGVLSNRPENVSNFIQADDIFGPDC 474
           MI+AV+V++TQGKPRL KFY+FQPPEK QE++R V+ +LS RPENVSNF++AD IFGP  
Sbjct: 1   MIQAVMVISTQGKPRLLKFYNFQPPEKHQELVRGVFQLLSARPENVSNFVEADAIFGPGA 60

Query: 473 KIVYKHLATLYFIFVFDSSENELAMLDLIQVFVETLDRCFKNVCELDVVFNFNKLHTILN 294
           K+VYKHLATLYF+F+FDSSENELAMLDL+QVFVETLDRCFKNVCELD+VFNFNKLHTIL+
Sbjct: 61  KLVYKHLATLYFVFIFDSSENELAMLDLVQVFVETLDRCFKNVCELDIVFNFNKLHTILD 120

Query: 293 EIILGGQVLETSSEEVMKAIEEISRLEKSTSAVSLIPKAVSGKLGR 156
           E+ILGGQV+ETSSE+++K++EEI+RLEK +S  S+IPK++S +  R
Sbjct: 121 EMILGGQVIETSSEQIVKSVEEIARLEKQSSTASIIPKSISDRFSR 166


>gb|EEE58638.1| hypothetical protein OsJ_10010 [Oryza sativa Japonica Group]
          Length = 166

 Score =  255 bits (652), Expect = 5e-66
 Identities = 118/166 (71%), Positives = 150/166 (90%)
 Frame = -3

Query: 653 MIRAVIVMNTQGKPRLTKFYDFQPPEKQQEMIRKVYGVLSNRPENVSNFIQADDIFGPDC 474
           MI+AV+VM+TQGKPRL KFY +QPPEK Q+++R V+ +LS RPE+VSNF++ + IFGP  
Sbjct: 1   MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSERPESVSNFVKVNAIFGPGA 60

Query: 473 KIVYKHLATLYFIFVFDSSENELAMLDLIQVFVETLDRCFKNVCELDVVFNFNKLHTILN 294
           K+VYKHLATLYF+FVFDSSENELA+LDL+QVFVETLDRCFKNVCELD+VFNFNKLHTIL+
Sbjct: 61  KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNKLHTILD 120

Query: 293 EIILGGQVLETSSEEVMKAIEEISRLEKSTSAVSLIPKAVSGKLGR 156
           E+ILGGQV+ETSSE++M+++EEI+RLEK ++  SLIPK++S +  R
Sbjct: 121 EMILGGQVIETSSEQIMRSVEEIARLEKQSNTTSLIPKSISERFSR 166


>ref|NP_001049451.1| Os03g0228400 [Oryza sativa Japonica Group]
           gi|108706971|gb|ABF94766.1| Clathrin adaptor complex
           small chain family protein, expressed [Oryza sativa
           Japonica Group] gi|113547922|dbj|BAF11365.1|
           Os03g0228400 [Oryza sativa Japonica Group]
           gi|215737284|dbj|BAG96213.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 166

 Score =  255 bits (652), Expect = 5e-66
 Identities = 118/166 (71%), Positives = 150/166 (90%)
 Frame = -3

Query: 653 MIRAVIVMNTQGKPRLTKFYDFQPPEKQQEMIRKVYGVLSNRPENVSNFIQADDIFGPDC 474
           MI+AV+VM+TQGKPRL KFY +QPPEK Q+++R V+ +LS RP++VSNF++ D IFGP  
Sbjct: 1   MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFGPGA 60

Query: 473 KIVYKHLATLYFIFVFDSSENELAMLDLIQVFVETLDRCFKNVCELDVVFNFNKLHTILN 294
           K+VYKHLATLYF+FVFDSSENELA+LDL+QVFVETLDRCFKNVCELD+VFNFNKLHTIL+
Sbjct: 61  KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNKLHTILD 120

Query: 293 EIILGGQVLETSSEEVMKAIEEISRLEKSTSAVSLIPKAVSGKLGR 156
           E+ILGGQV+ETSSE++M+++EEI+RLEK ++  SLIPK++S +  R
Sbjct: 121 EMILGGQVIETSSEQIMRSVEEIARLEKQSNTTSLIPKSISERFSR 166


>ref|XP_002465603.1| hypothetical protein SORBIDRAFT_01g041930 [Sorghum bicolor]
           gi|241919457|gb|EER92601.1| hypothetical protein
           SORBIDRAFT_01g041930 [Sorghum bicolor]
          Length = 166

 Score =  253 bits (646), Expect = 3e-65
 Identities = 118/166 (71%), Positives = 148/166 (89%)
 Frame = -3

Query: 653 MIRAVIVMNTQGKPRLTKFYDFQPPEKQQEMIRKVYGVLSNRPENVSNFIQADDIFGPDC 474
           MI+AV+V++TQ KPRL KFY+FQPPEK Q+++R V+ +LS RP++VSNF++ D IFGP  
Sbjct: 1   MIQAVMVISTQAKPRLLKFYNFQPPEKHQDLVRSVFQLLSARPDSVSNFVKVDSIFGPGT 60

Query: 473 KIVYKHLATLYFIFVFDSSENELAMLDLIQVFVETLDRCFKNVCELDVVFNFNKLHTILN 294
           K+VYKHLATLYF+FVFDSSENELAMLDLIQVFVETLD+CFKNVCELD+VFNFNKLHTIL+
Sbjct: 61  KMVYKHLATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVFNFNKLHTILD 120

Query: 293 EIILGGQVLETSSEEVMKAIEEISRLEKSTSAVSLIPKAVSGKLGR 156
           E+ILGGQV+ETSSE++MK++EEI RLEK +S  S IPK+++ +  R
Sbjct: 121 EMILGGQVIETSSEQIMKSVEEIERLEKQSSTTSFIPKSITERFTR 166


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