BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016553
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006532352.1| cobalamin biosynthesis protein CobW [Pseudom...    62   5e-08
ref|YP_005930127.1| CobW [Pseudomonas putida BIRD-1] gi|31349855...    62   5e-08
ref|YP_004486244.1| cobalamin biosynthesis protein CobW [Delftia...    62   6e-08
ref|YP_001418173.1| cobalamin biosynthesis protein CobW [Xanthob...    62   6e-08
ref|ZP_11388860.1| putative GTPase, G3E family [Oscillatoriales ...    61   8e-08

>ref|YP_006532352.1| cobalamin biosynthesis protein CobW [Pseudomonas putida DOT-T1E]
           gi|397331201|gb|AFO47560.1| cobalamin biosynthesis
           protein CobW [Pseudomonas putida DOT-T1E]
          Length = 381

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = -2

Query: 230 CRPSDRRPGRSAG*TCGRMACTLVTGFLGSGKTTLLRHILDNRGDLRIAVLVNEF 66
           C P+    G+    T  ++  T+VTGFLGSGKTTLLRH+LDN    RIAV+VNEF
Sbjct: 15  CMPAPHCQGQCDMKTLAKLPVTIVTGFLGSGKTTLLRHMLDNAQGRRIAVIVNEF 69


>ref|YP_005930127.1| CobW [Pseudomonas putida BIRD-1] gi|313498556|gb|ADR59922.1| CobW
           [Pseudomonas putida BIRD-1]
          Length = 381

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 38/55 (69%)
 Frame = -2

Query: 230 CRPSDRRPGRSAG*TCGRMACTLVTGFLGSGKTTLLRHILDNRGDLRIAVLVNEF 66
           C P+    G+    T  ++  T+VTGFLGSGKTTLLRH+LDN    RIAV+VNEF
Sbjct: 15  CMPAPHCQGQCDMKTLAKLPVTIVTGFLGSGKTTLLRHMLDNAQGRRIAVIVNEF 69


>ref|YP_004486244.1| cobalamin biosynthesis protein CobW [Delftia sp. Cs1-4]
           gi|333742712|gb|AEF87889.1| cobalamin biosynthesis
           protein CobW [Delftia sp. Cs1-4]
          Length = 349

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 179 RMACTLVTGFLGSGKTTLLRHILDNRGDLRIAVLVNEF 66
           ++  T+VTGFLGSGKTTLLRHILDN G  RIAV+VNEF
Sbjct: 5   KIPATIVTGFLGSGKTTLLRHILDNAGGRRIAVIVNEF 42


>ref|YP_001418173.1| cobalamin biosynthesis protein CobW [Xanthobacter autotrophicus
           Py2] gi|154161300|gb|ABS68516.1| cobalamin biosynthesis
           protein CobW [Xanthobacter autotrophicus Py2]
          Length = 344

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -2

Query: 179 RMACTLVTGFLGSGKTTLLRHILDNRGDLRIAVLVNEF 66
           R+ CT+VTGFLG+GKTTL+RH+L+N G  R+AV+VNEF
Sbjct: 6   RVPCTIVTGFLGAGKTTLIRHVLENAGGKRLAVIVNEF 43


>ref|ZP_11388860.1| putative GTPase, G3E family [Oscillatoriales cyanobacterium JSC-12]
           gi|410712476|gb|EKQ69977.1| putative GTPase, G3E family
           [Oscillatoriales cyanobacterium JSC-12]
          Length = 361

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -2

Query: 176 MACTLVTGFLGSGKTTLLRHILDNRGDLRIAVLVNEF 66
           M  T++TGFLGSGKTTLL HIL+NR DL++AVLVNEF
Sbjct: 20  MPVTIITGFLGSGKTTLLNHILNNRHDLKVAVLVNEF 56