BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016537
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ08384.1| qLTG3-1 [Oryza longistaminata]                        109   3e-22
gb|ABF93505.1| retrotransposon protein, putative, Ty1-copia subc...   109   3e-22
dbj|BAJ08381.1| qLTG3-1 [Oryza rufipogon]                             109   4e-22
dbj|BAJ08383.1| qLTG3-1 [Oryza glumipatula]                           108   5e-22
dbj|BAJ08382.1| qLTG3-1 [Oryza barthii]                               108   5e-22

>dbj|BAJ08384.1| qLTG3-1 [Oryza longistaminata]
          Length = 194

 Score =  109 bits (273), Expect = 3e-22
 Identities = 64/174 (36%), Positives = 75/174 (43%), Gaps = 4/174 (2%)
 Frame = -1

Query: 580 PPSGNGGHXXXXXXXXXXXXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHXXXXXXXXXXX 401
           P  G GG                G GG G               G+GG            
Sbjct: 33  PSPGGGGGGGGGGGGGGGGGGRGGGGGSGGGSGGGSGGGGGSGGGSGGGSGGGGSGGGGS 92

Query: 400 XXPSGNGGQGVXXXXXXXXXXXXPSGNGGHCP----SLGVCVTDLVNPLGVTIGQVSKEP 233
              SG GG G               G GG CP     LGVC   L   + V +G   ++P
Sbjct: 93  GGGSGGGGSG-------------GGGGGGRCPIDTLKLGVCANVLNGLINVQLGTPPRQP 139

Query: 232 CCSLIADLVDLRAAVCLCAELKANVLGININLDIALKLILNNCGKQVPKGFHCS 71
           CCSLI  L DL AAVCLC  L+AN+LGIN+NL I L L++N CG+ VP GF CS
Sbjct: 140 CCSLIQGLADLEAAVCLCTALRANILGINLNLPINLSLLVNYCGRSVPSGFQCS 193


>gb|ABF93505.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 179

 Score =  109 bits (273), Expect = 3e-22
 Identities = 67/175 (38%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
 Frame = -1

Query: 583 SPPSGNGGHXXXXXXXXXXXXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHXXXXXXXXXX 404
           S PSG GG                G GG+G              SG GG           
Sbjct: 31  SCPSGGGG------------GGGGGGGGRGGGGGSGGGSGGGGGSGGGG----------- 67

Query: 403 XXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHCP----SLGVCVTDLVNPLGVTIGQVSKE 236
               SG GG G               G GG CP     LGVC   L   + V +G   ++
Sbjct: 68  ----SGGGGSGGGGSGGGGGGGSGGGGGGGRCPIDTLKLGVCANVLNGLINVQLGTPPRQ 123

Query: 235 PCCSLIADLVDLRAAVCLCAELKANVLGININLDIALKLILNNCGKQVPKGFHCS 71
           PCCSLI  L DL AAVCLC  L+AN+LGIN+NL I L L++N CG+ VP GF CS
Sbjct: 124 PCCSLIQGLADLEAAVCLCTALRANILGINLNLPINLSLLVNYCGRSVPSGFQCS 178


>dbj|BAJ08381.1| qLTG3-1 [Oryza rufipogon]
          Length = 194

 Score =  109 bits (272), Expect = 4e-22
 Identities = 65/175 (37%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
 Frame = -1

Query: 583 SPPSGNGGHXXXXXXXXXXXXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHXXXXXXXXXX 404
           SP  G GG                G  G G              SG GG           
Sbjct: 34  SPGGGGGGGGGGGGGGRGGGGGSGGGSGGGSGGGGSGGGGGGGGSGGGG----------- 82

Query: 403 XXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHCP----SLGVCVTDLVNPLGVTIGQVSKE 236
               SG GG G               G GG CP     LGVC   L   + V +G   ++
Sbjct: 83  ----SGGGGSGGGGSGGGGGGGSGGGGGGGRCPIDTLKLGVCANVLNGLINVQLGTPPRQ 138

Query: 235 PCCSLIADLVDLRAAVCLCAELKANVLGININLDIALKLILNNCGKQVPKGFHCS 71
           PCCSLI  L DL AAVCLC  L+AN+LGIN+NL I L L++N CG+ VP GF CS
Sbjct: 139 PCCSLIQGLADLEAAVCLCTALRANILGINLNLPINLSLLVNYCGRSVPSGFQCS 193


>dbj|BAJ08383.1| qLTG3-1 [Oryza glumipatula]
          Length = 194

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/175 (37%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
 Frame = -1

Query: 583 SPPSGNGGHXXXXXXXXXXXXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHXXXXXXXXXX 404
           SP  G GG                G  G G              SG GG           
Sbjct: 34  SPGGGGGGGGGGRGGGGGSGGGSGGGSGGGRSGGGGSGGGGGGGSGGGG----------- 82

Query: 403 XXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHCP----SLGVCVTDLVNPLGVTIGQVSKE 236
               SG GG G               G GG CP     LGVC   L   + V +G   ++
Sbjct: 83  ----SGGGGSGGGGSGGGGGGGSGGGGGGGRCPIDTLKLGVCANVLNGLINVQLGTPPRQ 138

Query: 235 PCCSLIADLVDLRAAVCLCAELKANVLGININLDIALKLILNNCGKQVPKGFHCS 71
           PCCSLI  L DL AAVCLC  L+AN+LGIN+NL I L L++N CG+ VP GF CS
Sbjct: 139 PCCSLIQGLADLEAAVCLCTALRANILGINLNLPINLSLLVNYCGRSVPSGFQCS 193


>dbj|BAJ08382.1| qLTG3-1 [Oryza barthii]
          Length = 198

 Score =  108 bits (271), Expect = 5e-22
 Identities = 64/173 (36%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
 Frame = -1

Query: 577 PSGNGGHXXXXXXXXXXXXXPSGNGGQGVXXXXXXXXXXXXPSGNGGHXXXXXXXXXXXX 398
           P G GG               SG G  G               G+GG             
Sbjct: 35  PGGGGGGGGGGGGGGRGGGGGSGGGSGG----------GSGGGGSGGGGSGGGGGGGSGG 84

Query: 397 XPSGNGGQGVXXXXXXXXXXXXPSGNGGHCP----SLGVCVTDLVNPLGVTIGQVSKEPC 230
             SG GG G               G GG CP     LGVC   L   + V +G   ++PC
Sbjct: 85  GGSGGGGSGGGGSGGGGGGGSGGGGGGGRCPIDTLKLGVCANVLNGLINVQLGTPPRQPC 144

Query: 229 CSLIADLVDLRAAVCLCAELKANVLGININLDIALKLILNNCGKQVPKGFHCS 71
           CSLI  L DL AAVCLC  L+AN+LGIN+NL I L L++N CG+ VP GF CS
Sbjct: 145 CSLIQGLADLEAAVCLCTALRANILGINLNLPINLSLLVNYCGRSVPSGFQCS 197