BLASTX nr result

ID: Dioscorea21_contig00016202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016202
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...   272   8e-71
ref|XP_003615713.1| rRNA-processing protein UTP23-like protein [...   264   2e-68
ref|NP_001046821.1| Os02g0468200 [Oryza sativa Japonica Group] g...   264   2e-68
ref|XP_003597391.1| rRNA-processing protein UTP23-like protein [...   263   4e-68
ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 hom...   263   4e-68

>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
           gi|296082256|emb|CBI21261.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score =  272 bits (695), Expect = 8e-71
 Identities = 139/260 (53%), Positives = 187/260 (71%), Gaps = 7/260 (2%)
 Frame = +1

Query: 100 MRVKKQKRHRKAVRFYSACFGFREPYKVLCDGTFVHHLLLHGLVPADNALQRLLGARVLL 279
           MR+KKQKRHRK VRFY+ACFGFR+P+KVLCDGTFVHHL+++ + P DNA+  +LGA V L
Sbjct: 1   MRLKKQKRHRKIVRFYTACFGFRQPFKVLCDGTFVHHLIVNHISPPDNAVSTILGAPVKL 60

Query: 280 FSSRCVVAELQALGESHSEALNAARQLVTARCDHEKRVSATACIASIIGESNPEHFFVAT 459
            ++RCV+AEL++LG+S+SE+L AA +L+ ARCDHE+R SA AC   IIGE+NPEHFFVAT
Sbjct: 61  MTTRCVLAELKSLGDSYSESLKAAGKLIAARCDHERRKSAEACFVEIIGENNPEHFFVAT 120

Query: 460 QDADLRRMFQKIPGVPVIYGLKNSLFIDQPSAHQREFVKSTDERRMHMNVPEYYKLHKKE 639
           QD DLR+ FQ+IPGVPVI+GL+N+L ++ PS  QR+FVKS++E R+HM   E +KL  K 
Sbjct: 121 QDTDLRKKFQEIPGVPVIFGLRNALLLEPPSVSQRQFVKSSEEERLHMTELE-HKLLSKR 179

Query: 640 SMDELTSAKLNDDSANETSGSEH----MRKSIGEGHA---LGVADXXXXXXXXXXGPNPL 798
             + LTS K   DS++E    E     ++ +  E +A   + V D          GPNPL
Sbjct: 180 QKNRLTS-KETKDSSDENEALEDQNLGLQAATNENNAKRRMVVKDRVQFKRNKAKGPNPL 238

Query: 799 SCLKKKTKEASSNAINQDEK 858
           SC KKK++   + A  +++K
Sbjct: 239 SCKKKKSQRQPNPASEKEDK 258


>ref|XP_003615713.1| rRNA-processing protein UTP23-like protein [Medicago truncatula]
           gi|355517048|gb|AES98671.1| rRNA-processing protein
           UTP23-like protein [Medicago truncatula]
          Length = 289

 Score =  264 bits (675), Expect = 2e-68
 Identities = 126/255 (49%), Positives = 185/255 (72%), Gaps = 9/255 (3%)
 Frame = +1

Query: 100 MRVKKQKRHRKAVRFYSACFGFREPYKVLCDGTFVHHLLLHGLVPADNALQRLLGARVLL 279
           M+VKKQKRHRK++ FY+ACFGFR+PYKVLCDGTFV+HL+++ + PAD AL  +L A V L
Sbjct: 5   MKVKKQKRHRKSLTFYTACFGFRKPYKVLCDGTFVNHLIVNRITPADTALANILSATVKL 64

Query: 280 FSSRCVVAELQALGESHSEALNAARQLVTARCDHEKRVSATACIASIIGESNPEHFFVAT 459
           +++RCVVAEL+ LG+S+SEAL+AA  L+ ARC+H+K V A +CI  ++GE+N EHFFVA+
Sbjct: 65  YTTRCVVAELKRLGKSYSEALDAANDLIIARCEHDKCVRADSCIMEVVGENNSEHFFVAS 124

Query: 460 QDADLRRMFQKIPGVPVIYGLKNSLFIDQPSAHQREFVKSTDERRMHMNVPEYYKLHKKE 639
           QD DLR+  +++PGVP+I+GL+N+LF++ PSA Q+E+VK+++ERR+HM   E Y++ K  
Sbjct: 125 QDTDLRKKLEEVPGVPLIFGLRNALFLESPSAFQKEYVKTSEERRLHMTDKE-YQIFKDR 183

Query: 640 SMDELTSAKL---------NDDSANETSGSEHMRKSIGEGHALGVADXXXXXXXXXXGPN 792
           +M +L   +          N+D  +  + ++ +++SI   +  GV D          GPN
Sbjct: 184 AMKKLADGEADNSNAEIVENNDLGDSIASAQAIKRSIISRNQNGVRDKPQFKRRKAKGPN 243

Query: 793 PLSCLKKKTKEASSN 837
           PLSC KKK++E  +N
Sbjct: 244 PLSCKKKKSRENQNN 258


>ref|NP_001046821.1| Os02g0468200 [Oryza sativa Japonica Group]
           gi|47497320|dbj|BAD19361.1| unknown protein [Oryza
           sativa Japonica Group] gi|47497523|dbj|BAD19576.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113536352|dbj|BAF08735.1| Os02g0468200 [Oryza sativa
           Japonica Group] gi|215737322|dbj|BAG96251.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222622831|gb|EEE56963.1| hypothetical protein
           OsJ_06675 [Oryza sativa Japonica Group]
          Length = 277

 Score =  264 bits (674), Expect = 2e-68
 Identities = 140/256 (54%), Positives = 176/256 (68%), Gaps = 3/256 (1%)
 Frame = +1

Query: 100 MRVKKQKRHRKAVRFYSACFGFREPYKVLCDGTFVHHLLLHGLVPADNALQRLLGAR--V 273
           MRVK++ ++RK VRFY+ CFGFREPY+VL DGTFVHHLL H L+PAD+ALQ LL A    
Sbjct: 1   MRVKRRSKNRKVVRFYATCFGFREPYRVLVDGTFVHHLLSHSLLPADDALQSLLSASRPP 60

Query: 274 LLFSSRCVVAELQALGESHSEALNAARQLVTARCDHEKRVSATACIASIIGESNPEHFFV 453
            LF+S+CV+AEL+ LG+SH++A +AA  L TA+C+H+K VSA  C+ S+IGE NPEHFFV
Sbjct: 61  PLFTSKCVLAELRRLGKSHADAFDAAALLATAKCEHDKVVSAVDCVLSLIGEKNPEHFFV 120

Query: 454 ATQDADLRRMFQKIPGVPVIYGLKNSLFIDQPSAHQREFVKSTDERRMHMNVPEYYKLHK 633
           ATQD+DLR   +++PGVPVIYGLK+SLFI+QPS  QR+F +  +E+R+HM   EY KL K
Sbjct: 121 ATQDSDLRAKLREVPGVPVIYGLKSSLFIEQPSVQQRKFAQLDEEKRLHMGKSEYQKLLK 180

Query: 634 KESMDE-LTSAKLNDDSANETSGSEHMRKSIGEGHALGVADXXXXXXXXXXGPNPLSCLK 810
             S  +   S   +DD  N    S  +       +ALGVAD          GPNPLSC K
Sbjct: 181 VPSDGKAAASENASDDEKNRRPISSLVE------NALGVADKSKFKKKRPKGPNPLSCKK 234

Query: 811 KKTKEASSNAINQDEK 858
           KK K   S A NQ  K
Sbjct: 235 KKPKPQLSAAQNQGPK 250


>ref|XP_003597391.1| rRNA-processing protein UTP23-like protein [Medicago truncatula]
           gi|87241272|gb|ABD33130.1| Protein of unknown function
           DUF652 [Medicago truncatula] gi|355486439|gb|AES67642.1|
           rRNA-processing protein UTP23-like protein [Medicago
           truncatula]
          Length = 289

 Score =  263 bits (672), Expect = 4e-68
 Identities = 125/255 (49%), Positives = 183/255 (71%), Gaps = 9/255 (3%)
 Frame = +1

Query: 100 MRVKKQKRHRKAVRFYSACFGFREPYKVLCDGTFVHHLLLHGLVPADNALQRLLGARVLL 279
           M+VKKQKRHRK++ FY+ACFGFR+PYKVLCDGTFVHHL+++ + PAD AL  +L A V L
Sbjct: 5   MKVKKQKRHRKSLTFYTACFGFRKPYKVLCDGTFVHHLVVNRITPADTALANILSATVKL 64

Query: 280 FSSRCVVAELQALGESHSEALNAARQLVTARCDHEKRVSATACIASIIGESNPEHFFVAT 459
           +++RCV+AEL+ LG+S+SEAL+AA  L+ ARC+H+K   A +CI  ++GE+N EHFFVA+
Sbjct: 65  YTTRCVLAELKRLGKSYSEALDAANNLIIARCEHDKCARADSCIMEVVGENNSEHFFVAS 124

Query: 460 QDADLRRMFQKIPGVPVIYGLKNSLFIDQPSAHQREFVKSTDERRMHMNVPEYYKLHKKE 639
           QD DLR+  +++PGVP+I+GL+N+LF++ PSA Q+E+VK+++ERR+HM   E Y++ K  
Sbjct: 125 QDTDLRKKLEEVPGVPLIFGLRNALFLESPSAFQKEYVKTSEERRLHMTDKE-YQIFKDR 183

Query: 640 SMDELTSAKL---------NDDSANETSGSEHMRKSIGEGHALGVADXXXXXXXXXXGPN 792
           +M  L   +          N+D  +  + ++ +++SI   +  GV D          GPN
Sbjct: 184 AMKRLADGEADNSNAEIVENNDLGDSIASAQAIKRSIISRNHNGVKDKPQFKRRKAKGPN 243

Query: 793 PLSCLKKKTKEASSN 837
           PLSC KKK++E  +N
Sbjct: 244 PLSCKKKKSRENQNN 258


>ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score =  263 bits (672), Expect = 4e-68
 Identities = 126/259 (48%), Positives = 181/259 (69%), Gaps = 9/259 (3%)
 Frame = +1

Query: 100 MRVKKQKRHRKAVRFYSACFGFREPYKVLCDGTFVHHLLLHGLVPADNALQRLLGARVLL 279
           M+VKKQKRHRK + FY+ACFGFR+PYKVLCDGTFVHHLL++ + PAD A+  +L A + L
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKL 60

Query: 280 FSSRCVVAELQALGESHSEALNAARQLVTARCDHEKRVSATACIASIIGESNPEHFFVAT 459
           +++RCV+AEL+ LG S+SEAL AA +L+ ARC+HEK  SA ACI  ++GE N EHFFVA+
Sbjct: 61  YTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVAS 120

Query: 460 QDADLRRMFQKIPGVPVIYGLKNSLFIDQPSAHQREFVKSTDERRMHMNVPEYYKLHKKE 639
           QD DLR+  Q++PGVP+I+GL+N+LF++ PSA QR++VK+++E R+HM   E Y++ K  
Sbjct: 121 QDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKE-YQIFKDR 179

Query: 640 SMDELTSAKLN---------DDSANETSGSEHMRKSIGEGHALGVADXXXXXXXXXXGPN 792
            M+ LT  + N         +DS ++T   + + K I   + + + D          GPN
Sbjct: 180 VMNRLTGEEANNSITEIMEIEDSEDQTINVQAVEKGITSRNRMEIKDEPQFKRKRAKGPN 239

Query: 793 PLSCLKKKTKEASSNAINQ 849
           PLSC KKK+++ +   + +
Sbjct: 240 PLSCKKKKSEKQNIGPLKE 258


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