BLASTX nr result

ID: Dioscorea21_contig00015997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015997
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-32
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-31
ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni...   136   1e-31
emb|CAB51619.1| unnamed protein product [Ricinus communis]            136   1e-31
sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-bindi...   136   1e-31

>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score =  138 bits (347), Expect(2) = 5e-32
 Identities = 83/126 (65%), Positives = 87/126 (69%), Gaps = 27/126 (21%)
 Frame = +2

Query: 2   VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100
           VLDEFGSPKVV                           A KTN S GDGTT ASVLA+EI
Sbjct: 84  VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143

Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280
            KLGLLSV S ANPVSIKK IDKT+QGLVEELE RAR VKGRDDIKAVA++SAGNDE IG
Sbjct: 144 IKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRARPVKGRDDIKAVATISAGNDELIG 203

Query: 281 NMIADA 298
            MIADA
Sbjct: 204 TMIADA 209



 Score = 24.6 bits (52), Expect(2) = 5e-32
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 298 IDKVGPDGVL 327
           IDKVGPDGVL
Sbjct: 210 IDKVGPDGVL 219


>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  137 bits (344), Expect(2) = 1e-31
 Identities = 82/126 (65%), Positives = 87/126 (69%), Gaps = 27/126 (21%)
 Frame = +2

Query: 2   VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100
           VLDEFGSPKVV                           A KTN S GDGTT ASVLA+EI
Sbjct: 84  VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143

Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280
            KLGLLSV S ANPVSIK+ IDKT+QGLVEELE +AR VKGRDDIKAVAS+SAGNDE IG
Sbjct: 144 IKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKARPVKGRDDIKAVASISAGNDELIG 203

Query: 281 NMIADA 298
            MIADA
Sbjct: 204 TMIADA 209



 Score = 24.6 bits (52), Expect(2) = 1e-31
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 298 IDKVGPDGVL 327
           IDKVGPDGVL
Sbjct: 210 IDKVGPDGVL 219


>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 501

 Score =  136 bits (343), Expect(2) = 1e-31
 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%)
 Frame = +2

Query: 2   VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100
           VLDEFGSPKVV                           A KTN S GDGTT ASVLA+EI
Sbjct: 84  VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143

Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280
            KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG
Sbjct: 144 IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 203

Query: 281 NMIADA 298
            MIADA
Sbjct: 204 TMIADA 209



 Score = 24.6 bits (52), Expect(2) = 1e-31
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 298 IDKVGPDGVL 327
           IDKVGPDGVL
Sbjct: 210 IDKVGPDGVL 219


>emb|CAB51619.1| unnamed protein product [Ricinus communis]
          Length = 496

 Score =  136 bits (343), Expect(2) = 1e-31
 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%)
 Frame = +2

Query: 2   VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100
           VLDEFGSPKVV                           A KTN S GDGTT ASVLA+EI
Sbjct: 27  VLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 86

Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280
            KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG
Sbjct: 87  IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 146

Query: 281 NMIADA 298
            MIADA
Sbjct: 147 TMIADA 152



 Score = 24.6 bits (52), Expect(2) = 1e-31
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 298 IDKVGPDGVL 327
           IDKVGPDGVL
Sbjct: 153 IDKVGPDGVL 162


>sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-binding protein subunit alpha;
           AltName: Full=60 kDa chaperonin subunit alpha; AltName:
           Full=CPN-60 alpha
          Length = 495

 Score =  136 bits (343), Expect(2) = 1e-31
 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%)
 Frame = +2

Query: 2   VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100
           VLDEFGSPKVV                           A KTN S GDGTT ASVLA+EI
Sbjct: 27  VLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 86

Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280
            KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG
Sbjct: 87  IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 146

Query: 281 NMIADA 298
            MIADA
Sbjct: 147 TMIADA 152



 Score = 24.6 bits (52), Expect(2) = 1e-31
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 298 IDKVGPDGVL 327
           IDKVGPDGVL
Sbjct: 153 IDKVGPDGVL 162


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