BLASTX nr result
ID: Dioscorea21_contig00015997
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00015997 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 138 5e-32 ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 137 1e-31 ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni... 136 1e-31 emb|CAB51619.1| unnamed protein product [Ricinus communis] 136 1e-31 sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-bindi... 136 1e-31 >ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1| predicted protein [Populus trichocarpa] Length = 586 Score = 138 bits (347), Expect(2) = 5e-32 Identities = 83/126 (65%), Positives = 87/126 (69%), Gaps = 27/126 (21%) Frame = +2 Query: 2 VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100 VLDEFGSPKVV A KTN S GDGTT ASVLA+EI Sbjct: 84 VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143 Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280 KLGLLSV S ANPVSIKK IDKT+QGLVEELE RAR VKGRDDIKAVA++SAGNDE IG Sbjct: 144 IKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRARPVKGRDDIKAVATISAGNDELIG 203 Query: 281 NMIADA 298 MIADA Sbjct: 204 TMIADA 209 Score = 24.6 bits (52), Expect(2) = 5e-32 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 Query: 298 IDKVGPDGVL 327 IDKVGPDGVL Sbjct: 210 IDKVGPDGVL 219 >ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1| predicted protein [Populus trichocarpa] Length = 587 Score = 137 bits (344), Expect(2) = 1e-31 Identities = 82/126 (65%), Positives = 87/126 (69%), Gaps = 27/126 (21%) Frame = +2 Query: 2 VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100 VLDEFGSPKVV A KTN S GDGTT ASVLA+EI Sbjct: 84 VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143 Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280 KLGLLSV S ANPVSIK+ IDKT+QGLVEELE +AR VKGRDDIKAVAS+SAGNDE IG Sbjct: 144 IKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKARPVKGRDDIKAVASISAGNDELIG 203 Query: 281 NMIADA 298 MIADA Sbjct: 204 TMIADA 209 Score = 24.6 bits (52), Expect(2) = 1e-31 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 Query: 298 IDKVGPDGVL 327 IDKVGPDGVL Sbjct: 210 IDKVGPDGVL 219 >ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative [Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco subunit binding-protein alpha subunit, ruba, putative [Ricinus communis] Length = 501 Score = 136 bits (343), Expect(2) = 1e-31 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%) Frame = +2 Query: 2 VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100 VLDEFGSPKVV A KTN S GDGTT ASVLA+EI Sbjct: 84 VLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 143 Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280 KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG Sbjct: 144 IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 203 Query: 281 NMIADA 298 MIADA Sbjct: 204 TMIADA 209 Score = 24.6 bits (52), Expect(2) = 1e-31 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 Query: 298 IDKVGPDGVL 327 IDKVGPDGVL Sbjct: 210 IDKVGPDGVL 219 >emb|CAB51619.1| unnamed protein product [Ricinus communis] Length = 496 Score = 136 bits (343), Expect(2) = 1e-31 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%) Frame = +2 Query: 2 VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100 VLDEFGSPKVV A KTN S GDGTT ASVLA+EI Sbjct: 27 VLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 86 Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280 KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG Sbjct: 87 IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 146 Query: 281 NMIADA 298 MIADA Sbjct: 147 TMIADA 152 Score = 24.6 bits (52), Expect(2) = 1e-31 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 Query: 298 IDKVGPDGVL 327 IDKVGPDGVL Sbjct: 153 IDKVGPDGVL 162 >sp|P08824.1|RUBA_RICCO RecName: Full=RuBisCO large subunit-binding protein subunit alpha; AltName: Full=60 kDa chaperonin subunit alpha; AltName: Full=CPN-60 alpha Length = 495 Score = 136 bits (343), Expect(2) = 1e-31 Identities = 81/126 (64%), Positives = 87/126 (69%), Gaps = 27/126 (21%) Frame = +2 Query: 2 VLDEFGSPKVV---------------------------AIKTNYSDGDGTTIASVLAQEI 100 VLDEFGSPKVV A KTN S GDGTT ASVLA+EI Sbjct: 27 VLDEFGSPKVVNEGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTASVLAREI 86 Query: 101 TKLGLLSVASCANPVSIKK*IDKTIQGLVEELEIRARLVKGRDDIKAVASVSAGNDEFIG 280 KLGLLSV S ANPVSIK+ IDKT+QGL+EELE +AR VKGRDDIKAVAS+SAGNDE IG Sbjct: 87 IKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAGNDELIG 146 Query: 281 NMIADA 298 MIADA Sbjct: 147 TMIADA 152 Score = 24.6 bits (52), Expect(2) = 1e-31 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 Query: 298 IDKVGPDGVL 327 IDKVGPDGVL Sbjct: 153 IDKVGPDGVL 162