BLASTX nr result

ID: Dioscorea21_contig00015982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015982
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM80567.1| RNase S-like protein [Hordeum vulgare]                 177   3e-42
gb|AAM18521.1| S-like RNase [Triticum aestivum]                       174   2e-41
ref|NP_001063793.1| Os09g0537700 [Oryza sativa Japonica Group] g...   173   5e-41
gb|ABR25970.1| ribonuclease 3 precursor [Oryza sativa Indica Group]   173   5e-41
gb|EAZ09897.1| hypothetical protein OsI_32190 [Oryza sativa Indi...   173   5e-41

>gb|AAM80567.1| RNase S-like protein [Hordeum vulgare]
          Length = 245

 Score =  177 bits (449), Expect = 3e-42
 Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 8/238 (3%)
 Frame = -3

Query: 798 MMQLFASSSLVSAANVDFLYLVLMWPGAYCSQS--ACCRPTTGMPAEDFFIRGLWTYN-E 628
           ++ L A+++  SA + DF YL+LMWPGAYC+ S   CC P  G PAEDFF+ G  T++  
Sbjct: 11  ILGLLAAAAPASATSFDFYYLILMWPGAYCADSDYGCCVPKYGYPAEDFFVEGFMTFDLS 70

Query: 627 AGKPVTRCTRE-PYNPTEIEGLETELYEYWSSIKCPSNDGSLYWKKAWKTYGTCTGMYQP 451
             K + RC  + P++  ++E +E  L  YWS+I CP NDG+  WK  W++YG C+G+   
Sbjct: 71  LNKAIVRCNSDKPFDVNKLEPIENNLNHYWSNIHCPRNDGTGTWKSEWRSYGVCSGLKLV 130

Query: 450 TYFETALDLRAQVDLLTALGNKGITPSETRKYXXXXXXXXXXXATKATPVIRCNN----E 283
            YF  AL+LR + D+L AL  +GI P + R Y                P ++C +    +
Sbjct: 131 DYFRAALNLRKKADVLGALAEQGINP-DYRLYNTEHIKWAVNQKLGVMPGVQCRDGPFGK 189

Query: 282 GQLYEIYVCFDKRGGSAIECPVWPYFSCPNEIIIPPFTDNMLKIDAYPSINATPSASV 109
            QLY+IY+C DK G   I+CP  P   CP E++  PF   ML        NAT  A +
Sbjct: 190 KQLYQIYLCVDKDGQIFIDCPKLPKLHCPEEVLFHPFHTWML--------NATSPAKI 239


>gb|AAM18521.1| S-like RNase [Triticum aestivum]
          Length = 245

 Score =  174 bits (441), Expect = 2e-41
 Identities = 94/251 (37%), Positives = 136/251 (54%), Gaps = 8/251 (3%)
 Frame = -3

Query: 837 MASCVTVLPLFMGMMQLFASSSLVSAANVDFLYLVLMWPGAYC--SQSACCRPTTGMPAE 664
           MA     L L +G++   A+++  +A + DF YLVLMWPGAYC  S+  CC P  G PAE
Sbjct: 1   MAQRTISLCLILGLL---AAAAPANATSFDFYYLVLMWPGAYCVDSEYGCCVPKYGYPAE 57

Query: 663 DFFIRGLWTYN-EAGKPVTRCTRE-PYNPTEIEGLETELYEYWSSIKCPSNDGSLYWKKA 490
           DFF++   T++    K + RC  + P++  ++E +E  L  YWS+I CP  DG+  WK  
Sbjct: 58  DFFVQSFTTFDLSLNKAIVRCNSDKPFDINKLEPIENNLNHYWSNIHCPRTDGTSTWKSE 117

Query: 489 WKTYGTCTGMYQPTYFETALDLRAQVDLLTALGNKGITPSETRKYXXXXXXXXXXXATKA 310
           W++YG C+G+ +  YF   L+LR   D+L AL  +GI P + R Y               
Sbjct: 118 WRSYGVCSGLKEVDYFRAGLNLRKNADVLGALAEQGINP-DYRLYSTEHIKWAVNQKLGV 176

Query: 309 TPVIRCNN----EGQLYEIYVCFDKRGGSAIECPVWPYFSCPNEIIIPPFTDNMLKIDAY 142
            P ++C +    + QLY+IY+C DK G + I+CP  P   CP E++  PF   ML     
Sbjct: 177 MPGVQCRDGPFGKKQLYQIYLCVDKNGETIIDCPKLPKLHCPEEVLFHPFHTWML----- 231

Query: 141 PSINATPSASV 109
              NAT  A +
Sbjct: 232 ---NATSPAKI 239


>ref|NP_001063793.1| Os09g0537700 [Oryza sativa Japonica Group]
           gi|17105171|gb|AAL35582.1|AF439449_1 RNase S-like
           protein [Oryza sativa] gi|16506683|gb|AAL17717.1| RNase
           S-like protein [Oryza sativa]
           gi|50726601|dbj|BAD34235.1| drought-induced S-like
           ribonuclease [Oryza sativa Japonica Group]
           gi|50726654|dbj|BAD34372.1| drought-induced S-like
           ribonuclease [Oryza sativa Japonica Group]
           gi|113632026|dbj|BAF25707.1| Os09g0537700 [Oryza sativa
           Japonica Group] gi|125606460|gb|EAZ45496.1| hypothetical
           protein OsJ_30152 [Oryza sativa Japonica Group]
           gi|215679378|dbj|BAG96518.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215692507|dbj|BAG87927.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215704393|dbj|BAG93827.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737567|dbj|BAG96697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737612|dbj|BAG96742.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737650|dbj|BAG96780.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737691|dbj|BAG96821.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737739|dbj|BAG96869.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740857|dbj|BAG97013.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767341|dbj|BAG99569.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 252

 Score =  173 bits (438), Expect = 5e-41
 Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
 Frame = -3

Query: 819 VLPLFMGMMQLFASSSLVSAAN-VDFLYLVLMWPGAYCSQS--ACCRPTTGMPAEDFFIR 649
           +L L +G++     +  V+A +  DF YL+LMWPGAYC+ S   CC P  G P+EDFF++
Sbjct: 7   LLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVK 66

Query: 648 GLWTYNEA-GKPVTRCTRE-PYNPTEIEGLETELYEYWSSIKCPSNDGSLYWKKAWKTYG 475
              T++ +    V RC  + P++  +++ +E  L  YWS+IKCP  DG   WK  W +YG
Sbjct: 67  SFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYG 126

Query: 474 TCTGMYQPTYFETALDLRAQVDLLTALGNKGITPSETRKYXXXXXXXXXXXATKATPVIR 295
            C+G+ +  YF+  L LR   D+L+AL  +GI P + + Y               TP ++
Sbjct: 127 VCSGLKELDYFKAGLQLRKNADVLSALAEQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQ 185

Query: 294 CNN----EGQLYEIYVCFDKRGGSAIECPVWPYFSCPNEIIIPPFTDNMLKIDAYPSI 133
           C +    + QLYEIY+C DK   S I+CPV P  SCP E++  PF   ML   +  +I
Sbjct: 186 CRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSAANI 243


>gb|ABR25970.1| ribonuclease 3 precursor [Oryza sativa Indica Group]
          Length = 247

 Score =  173 bits (438), Expect = 5e-41
 Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
 Frame = -3

Query: 819 VLPLFMGMMQLFASSSLVSAAN-VDFLYLVLMWPGAYCSQS--ACCRPTTGMPAEDFFIR 649
           +L L +G++     +  V+A +  DF YL+LMWPGAYC+ S   CC P  G P+EDFF++
Sbjct: 7   LLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVK 66

Query: 648 GLWTYNEA-GKPVTRCTRE-PYNPTEIEGLETELYEYWSSIKCPSNDGSLYWKKAWKTYG 475
              T++ +    V RC  + P++  +++ +E  L  YWS+IKCP  DG   WK  W +YG
Sbjct: 67  SFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYG 126

Query: 474 TCTGMYQPTYFETALDLRAQVDLLTALGNKGITPSETRKYXXXXXXXXXXXATKATPVIR 295
            C+G+ +  YF+  L LR   D+L+AL  +GI P + + Y               TP ++
Sbjct: 127 VCSGLKELDYFKAGLQLRKNADVLSALAEQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQ 185

Query: 294 CNN----EGQLYEIYVCFDKRGGSAIECPVWPYFSCPNEIIIPPFTDNMLKIDAYPSI 133
           C +    + QLYEIY+C DK   S I+CPV P  SCP E++  PF   ML   +  +I
Sbjct: 186 CRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSAANI 243


>gb|EAZ09897.1| hypothetical protein OsI_32190 [Oryza sativa Indica Group]
          Length = 252

 Score =  173 bits (438), Expect = 5e-41
 Identities = 90/238 (37%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
 Frame = -3

Query: 819 VLPLFMGMMQLFASSSLVSAAN-VDFLYLVLMWPGAYCSQS--ACCRPTTGMPAEDFFIR 649
           +L L +G++     +  V+A +  DF YL+LMWPGAYC+ S   CC P  G P+EDFF++
Sbjct: 7   LLCLILGLLAASGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVK 66

Query: 648 GLWTYNEA-GKPVTRCTRE-PYNPTEIEGLETELYEYWSSIKCPSNDGSLYWKKAWKTYG 475
              T++ +    V RC  + P++  +++ +E  L  YWS+IKCP  DG   WK  W +YG
Sbjct: 67  SFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYG 126

Query: 474 TCTGMYQPTYFETALDLRAQVDLLTALGNKGITPSETRKYXXXXXXXXXXXATKATPVIR 295
            C+G+ +  YF+  L LR   D+L+AL  +GI P + + Y               TP ++
Sbjct: 127 VCSGLKELDYFKAGLQLRKNADVLSALAEQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQ 185

Query: 294 CNN----EGQLYEIYVCFDKRGGSAIECPVWPYFSCPNEIIIPPFTDNMLKIDAYPSI 133
           C +    + QLYEIY+C DK   S I+CPV P  SCP E++  PF   ML   +  +I
Sbjct: 186 CRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSAANI 243


Top