BLASTX nr result
ID: Dioscorea21_contig00015966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015966
(947 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 298 1e-78
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp.... 197 4e-48
ref|ZP_06097399.1| conserved hypothetical protein [Brucella sp. ... 127 4e-29
ref|ZP_05934035.1| conserved hypothetical protein [Brucella ceti... 127 4e-29
ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [... 126 7e-29
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 298 bits (764), Expect = 1e-78
Identities = 168/284 (59%), Positives = 177/284 (62%)
Frame = -1
Query: 947 GACGLIRYNAQNLTSP*HMNNKTCP*RDGTDFHTGAAWLSSARVVRCLVKSYNERNPRFV 768
GACGLIRYNAQNLTS AAWLSSARVVRCLVKSYNERNPRFV
Sbjct: 302 GACGLIRYNAQNLTS--------------------AAWLSSARVVRCLVKSYNERNPRFV 341
Query: 767 LLRHAPKEKWQPK*AE*RASATT*VPARSCAFSKNFTGAGAFRSTFTCEPKSSCVTRSPT 588
LLRHAPKEK R A+ AR+ RS+ C+ +
Sbjct: 342 LLRHAPKEKVFATEVS-RGLASKKTDART-------------RSSIPCDDDVELAAEKDS 387
Query: 587 YSDVKVPVTMMVWLGLVXXXXXXXXXXXXXSGEPPGGVVRSGNSTRPAPKQRKRCVPHSR 408
Y+ K + APKQ KRC+PHSR
Sbjct: 388 YAPPK----------------------------------------QTAPKQTKRCMPHSR 407
Query: 407 ETASEILEEGGDDVKSAWPLWAGPHTCYNGNDNRKQGCKAERIRKDCLSSDCSLQLGNMK 228
TAS+ILEEGGDDVKSAWPLWAGPHTCYNGN N KQGCKAERIRKDCLSSDCSLQLGNMK
Sbjct: 408 GTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMK 467
Query: 227 LESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFC 96
LESLVIADQHAAVNMYPGPVHTARHTLGIGFARSI PMITHDFC
Sbjct: 468 LESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIRPMITHDFC 511
>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
gi|40795104|gb|AAR91148.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 111
Score = 197 bits (500), Expect = 4e-48
Identities = 93/111 (83%), Positives = 94/111 (84%)
Frame = -1
Query: 560 MMVWLGLVXXXXXXXXXXXXXSGEPPGGVVRSGNSTRPAPKQRKRCVPHSRETASEILEE 381
M VWLGLV G+PPGGVVRSGNSTRPAPKQRKRCVPHSR TASEILEE
Sbjct: 1 MEVWLGLVTTTSSWRRRKTRHEGQPPGGVVRSGNSTRPAPKQRKRCVPHSRGTASEILEE 60
Query: 380 GGDDVKSAWPLWAGPHTCYNGNDNRKQGCKAERIRKDCLSSDCSLQLGNMK 228
GGDDVKSAWPLWAGPHTCYNGNDN KQGCKAERIRKDCLSSDCSLQLGNMK
Sbjct: 61 GGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK 111
>ref|ZP_06097399.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264663256|gb|EEZ33517.1| conserved hypothetical
protein [Brucella sp. 83/13]
Length = 122
Score = 127 bits (319), Expect(2) = 4e-29
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = -1
Query: 386 EEGGDDVKSAWPLWAGPHTCYNGNDNRKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIA 207
EEGGDDVKS+WPL AG HTCYNG D+ ++ + E I K LSSDC+LQL MKLESLVIA
Sbjct: 13 EEGGDDVKSSWPLRAGLHTCYNGGDSGQRARECELISKSHLSSDCTLQLECMKLESLVIA 72
Query: 206 DQHAAVNMYPGPVHTARHTLGIGFAR 129
DQHAAVN +PG VHTARHT+G+GF R
Sbjct: 73 DQHAAVNTFPGLVHTARHTMGVGFTR 98
Score = 27.7 bits (60), Expect(2) = 4e-29
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 48 HGGVFDWGEVVTR 10
HG V DWGEVVTR
Sbjct: 110 HGRVSDWGEVVTR 122
>ref|ZP_05934035.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261316118|ref|ZP_05955315.1| conserved hypothetical
protein [Brucella pinnipedialis M163/99/10]
gi|261322643|ref|ZP_05961840.1| conserved hypothetical
protein [Brucella ceti M644/93/1]
gi|261757300|ref|ZP_06001009.1| conserved hypothetical
protein [Brucella sp. F5/99] gi|260924843|gb|EEX91411.1|
conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261295333|gb|EEX98829.1| conserved hypothetical
protein [Brucella ceti M644/93/1]
gi|261305144|gb|EEY08641.1| conserved hypothetical
protein [Brucella pinnipedialis M163/99/10]
gi|261737284|gb|EEY25280.1| conserved hypothetical
protein [Brucella sp. F5/99]
Length = 116
Score = 127 bits (319), Expect(2) = 4e-29
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = -1
Query: 386 EEGGDDVKSAWPLWAGPHTCYNGNDNRKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIA 207
EEGGDDVKS+WPL AG HTCYNG D+ ++ + E I K LSSDC+LQL MKLESLVIA
Sbjct: 7 EEGGDDVKSSWPLRAGLHTCYNGGDSGQRARECELISKSHLSSDCTLQLECMKLESLVIA 66
Query: 206 DQHAAVNMYPGPVHTARHTLGIGFAR 129
DQHAAVN +PG VHTARHT+G+GF R
Sbjct: 67 DQHAAVNTFPGLVHTARHTMGVGFTR 92
Score = 27.7 bits (60), Expect(2) = 4e-29
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 48 HGGVFDWGEVVTR 10
HG V DWGEVVTR
Sbjct: 104 HGRVSDWGEVVTR 116
>ref|YP_005415536.1| hypothetical protein RSPPHO_03226, partial [Rhodospirillum
photometricum DSM 122] gi|378401450|emb|CCG06566.1|
Putative uncharacterized protein, partial
[Rhodospirillum photometricum DSM 122]
Length = 161
Score = 126 bits (316), Expect(2) = 7e-29
Identities = 63/96 (65%), Positives = 70/96 (72%)
Frame = -1
Query: 416 HSRETASEILEEGGDDVKSAWPLWAGPHTCYNGNDNRKQGCKAERIRKDCLSSDCSLQLG 237
HS ETA + EEGGDDVKS+WPL AG HTCYNG N + I K CLSSDC+LQLG
Sbjct: 42 HSGETAGDKPEEGGDDVKSSWPLRAGLHTCYNGIYNGSPPRERALISKRCLSSDCTLQLG 101
Query: 236 NMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFAR 129
MK ESLVI DQHA VN +PG VHTARHT+G+G R
Sbjct: 102 CMKSESLVIVDQHATVNTFPGLVHTARHTMGVGSTR 137
Score = 28.1 bits (61), Expect(2) = 7e-29
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 54 AYHGGVFDWGEVVTR 10
A HG V DWGEVVTR
Sbjct: 147 AGHGRVSDWGEVVTR 161