BLASTX nr result

ID: Dioscorea21_contig00015960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015960
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|2...   276   7e-72
ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Popu...   275   2e-71
ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group] g...   273   4e-71
gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japo...   270   3e-70
ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like ...   270   5e-70

>ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|222844799|gb|EEE82346.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score =  276 bits (705), Expect = 7e-72
 Identities = 148/241 (61%), Positives = 173/241 (71%), Gaps = 7/241 (2%)
 Frame = -2

Query: 738  ESNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 559
            ++N++PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+
Sbjct: 343  KANSRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 402

Query: 558  MLDEXXXXXXXXXXXXXXXMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-------D 400
                               MLDEIINYVQSLQRQVEFLSMKLA+VN RLDFN       D
Sbjct: 403  -------------------MLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNMDTLISKD 443

Query: 399  MHQNRGPLQHSFYPIESVPGAFSYAYQPQQEAPLQSVVTNNALETHCSMNPLDSGGLRQS 220
            + Q+  PL H  +P++S   A  +++Q QQ  PL S ++N A+ THCS++PLD+ GL Q+
Sbjct: 444  IFQSSQPLPHPIFPLDSSAPAAIFSHQQQQNPPLHSNISNGAV-THCSVDPLDTTGLCQT 502

Query: 219  LSMQLPPSDGFADAASQLCNFWEDDLQSVVQMGFGQNQEDAAFSSQNFHGSLATSHMKIE 40
            L+ QLPP DGF   A Q   F EDDLQ++VQMG+GQN     F  QNFHGS   SHMKIE
Sbjct: 503  LNAQLPPLDGFTQNAHQYPTFCEDDLQTIVQMGYGQNPNLETFLPQNFHGSNQVSHMKIE 562

Query: 39   L 37
            L
Sbjct: 563  L 563


>ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
            gi|222861217|gb|EEE98759.1| hypothetical protein
            POPTRDRAFT_572918 [Populus trichocarpa]
          Length = 568

 Score =  275 bits (702), Expect = 2e-71
 Identities = 174/306 (56%), Positives = 202/306 (66%), Gaps = 15/306 (4%)
 Frame = -2

Query: 909  ETPLSS------KVAEEEDGS-AKRCKLGEINRSTEKDGDVKLKTEQXXXXXXXXXXXDQ 751
            ETP SS      KVA E D S AKR K  E N S +KD   K K E+            Q
Sbjct: 302  ETPSSSPSASDVKVAAENDESKAKRSKSDETNGS-DKD-TAKEKEEENGN---------Q 350

Query: 750  KQGKESNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 571
            KQ K +N+KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT
Sbjct: 351  KQNK-NNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVT 409

Query: 570  GKAVMLDEXXXXXXXXXXXXXXXMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN---- 403
            GKAV                   MLDEIINYVQSLQRQVEFLSMKL++VNPR++ N    
Sbjct: 410  GKAV-------------------MLDEIINYVQSLQRQVEFLSMKLSSVNPRMEINMETL 450

Query: 402  ---DMHQNRGPLQHSFYPIESVPGAFSYAYQPQQEAPLQSVVTNNALETHCSMNPLDSGG 232
               D+ Q+RG + HS YP+++    F Y YQ QQ   LQ+ + +NA ET  SMNPL++  
Sbjct: 451  LSKDIFQSRGSMPHSLYPLDASTPVFPYGYQSQQGLALQNGMPSNA-ETQFSMNPLNA-A 508

Query: 231  LRQSLSMQLPPSDGFAD-AASQLCNFWEDDLQSVVQMGFGQNQEDAAFSSQNFHGSLATS 55
            LR++ SM LP  DGF D AA Q    WEDDLQSVVQMG+GQN +      ++F GS+ ++
Sbjct: 509  LRRNPSMHLPHLDGFGDPAALQASAMWEDDLQSVVQMGYGQNHQ------ESFQGSVPST 562

Query: 54   HMKIEL 37
            HMKIEL
Sbjct: 563  HMKIEL 568


>ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
            gi|56784941|dbj|BAD82399.1| putative bHLH transcription
            factor [Oryza sativa Japonica Group]
            gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa
            Japonica Group] gi|215704868|dbj|BAG94896.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218189599|gb|EEC72026.1| hypothetical protein
            OsI_04910 [Oryza sativa Indica Group]
            gi|323388943|gb|ADX60276.1| bHLH transcription factor
            [Oryza sativa Japonica Group]
          Length = 481

 Score =  273 bits (699), Expect = 4e-71
 Identities = 162/299 (54%), Positives = 196/299 (65%), Gaps = 8/299 (2%)
 Frame = -2

Query: 909  ETPLSSKVAEEEDGSAKRCKLGEINRSTEKDGDVKLKTEQXXXXXXXXXXXDQKQGKESN 730
            ++P+S+  A+E D S KRCK  E + +  ++   K K  Q            +KQGK+S+
Sbjct: 210  DSPMSTSAAKE-DSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGG----KKQGKDSS 264

Query: 729  AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 550
            +KPPEPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAV   
Sbjct: 265  SKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV--- 321

Query: 549  EXXXXXXXXXXXXXXXMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--------DMH 394
                            MLDEIINYVQSLQRQVEFLSMKLATVNP+LDFN        DMH
Sbjct: 322  ----------------MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMH 365

Query: 393  QNRGPLQHSFYPIESVPGAFSYAYQPQQEAPLQSVVTNNALETHCSMNPLDSGGLRQSLS 214
            Q+  PLQ S +P+E+      Y  QPQQ  PL   +T N ++   SM+PLD    R  + 
Sbjct: 366  QSCSPLQSSHFPLETSGAPLPYINQPQQGNPLGCGLT-NGMDNQGSMHPLDPAFCR-PMG 423

Query: 213  MQLPPSDGFADAASQLCNFWEDDLQSVVQMGFGQNQEDAAFSSQNFHGSLATSHMKIEL 37
               P  +G +DAASQ+  FW+DDLQSVVQM  GQ+QE  A SS +++GSL T HMK+EL
Sbjct: 424  SHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQSQE-IATSSNSYNGSLQTVHMKMEL 481


>gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
          Length = 483

 Score =  270 bits (691), Expect = 3e-70
 Identities = 159/289 (55%), Positives = 189/289 (65%), Gaps = 8/289 (2%)
 Frame = -2

Query: 879  EEDGSAKRCKLGEINRSTEKDGDVKLKTEQXXXXXXXXXXXDQKQGKESNAKPPEPPKDY 700
            +ED S KRCK  E + +  ++   K K  Q            +KQGK+S++KPPEPPKDY
Sbjct: 221  QEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGG----KKQGKDSSSKPPEPPKDY 276

Query: 699  IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEXXXXXXXXX 520
            IHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKAV             
Sbjct: 277  IHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV------------- 323

Query: 519  XXXXXXMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN--------DMHQNRGPLQHSF 364
                  MLDEIINYVQSLQRQVEFLSMKLATVNP+LDFN        DMHQ+  PLQ S 
Sbjct: 324  ------MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSH 377

Query: 363  YPIESVPGAFSYAYQPQQEAPLQSVVTNNALETHCSMNPLDSGGLRQSLSMQLPPSDGFA 184
            +P+E+      Y  QPQQ  PL   +T N ++   SM+PLD    R  +    P  +G +
Sbjct: 378  FPLETSGAPLPYINQPQQGNPLGCGLT-NGMDNQGSMHPLDPAFCR-PMGSHHPFLNGVS 435

Query: 183  DAASQLCNFWEDDLQSVVQMGFGQNQEDAAFSSQNFHGSLATSHMKIEL 37
            DAASQ+  FW+DDLQSVVQM  GQ+QE  A SS +++GSL T HMK+EL
Sbjct: 436  DAASQVGAFWQDDLQSVVQMDMGQSQE-IATSSNSYNGSLQTVHMKMEL 483


>ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
          Length = 569

 Score =  270 bits (689), Expect = 5e-70
 Identities = 169/294 (57%), Positives = 193/294 (65%), Gaps = 8/294 (2%)
 Frame = -2

Query: 894  SKVAEEEDGS-AKRCKLGEINRSTEKDGDVKLKTEQXXXXXXXXXXXDQKQGKESNAKPP 718
            +KVA ++D S AKR K  E    +EKD   K K E             QKQ K+ N KPP
Sbjct: 308  AKVASDKDESNAKRSKPDE-GSGSEKDA-AKAKAEANGSTKSAGDGN-QKQSKD-NPKPP 363

Query: 717  EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEXXX 538
            E PKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV       
Sbjct: 364  EAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV------- 416

Query: 537  XXXXXXXXXXXXMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFN-------DMHQNRGP 379
                        MLDEIINYVQSLQRQVEFLSMKLATVNPR+DFN       ++ Q+RG 
Sbjct: 417  ------------MLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGS 464

Query: 378  LQHSFYPIESVPGAFSYAYQPQQEAPLQSVVTNNALETHCSMNPLDSGGLRQSLSMQLPP 199
            L  + YP++S   AF Y YQPQQ   LQ+ + N   ET  S+NPL+S  +R++ SM LP 
Sbjct: 465  LPQAMYPLDSSALAFPYGYQPQQGPSLQNGIPNGT-ETPFSVNPLNS-AIRRTSSM-LPS 521

Query: 198  SDGFADAASQLCNFWEDDLQSVVQMGFGQNQEDAAFSSQNFHGSLATSHMKIEL 37
             DGF +AASQ+  FWED+L SVVQMG GQNQ       Q F GS+  + MKIEL
Sbjct: 522  IDGFGEAASQVSTFWEDELHSVVQMGIGQNQ------PQGFPGSMGAAQMKIEL 569


Top