BLASTX nr result

ID: Dioscorea21_contig00015959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015959
         (2257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522601.1| conserved hypothetical protein [Ricinus comm...   179   2e-42
emb|CBI27895.3| unnamed protein product [Vitis vinifera]              174   7e-41
ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containin...   171   8e-40
sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-con...   166   2e-38
gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japo...   166   2e-38

>ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
            gi|223538077|gb|EEF39688.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 932

 Score =  179 bits (455), Expect = 2e-42
 Identities = 103/242 (42%), Positives = 139/242 (57%), Gaps = 9/242 (3%)
 Frame = -2

Query: 1038 GVKRLKLQLVAKPKPVRYCEFYLKGRCQKGDACKFSHEATPLTKSQPCKYFACNTCLKGD 859
            GVKRLKL+ V KPKPV +C  Y++GRCQ+G+ CKFSH+  PLTKS+PC +FA N+CLKGD
Sbjct: 474  GVKRLKLRPVEKPKPVVFCRHYIRGRCQEGEKCKFSHDTIPLTKSKPCCHFARNSCLKGD 533

Query: 858  DCPFDHELSKYPCHNFQSKGMCLRGDNCKFSHKMSSVEDASTTS--ATNRSYSPPSTIAS 685
            DCPFDHELSKYPC N+ S G C RGD+C FSHK+   ED  + S   T    SP    AS
Sbjct: 534  DCPFDHELSKYPCTNYASTGSCSRGDDCMFSHKLPLKEDLPSASNVCTPDLNSPSLPHAS 593

Query: 684  NITNQFNVK--NHSTTSRSTFS----IYEDMKKNLVDKCLKPQVPSVEGYPTASASSKSD 523
            N   Q +    +H T   S  +      +D ++N+    L P V   +G    SA   S 
Sbjct: 594  NSKKQLDSGGISHHTAKASPDTGGGLSRKDTERNVPKGVLGPHVLVPKGISFLSAGKSSV 653

Query: 522  TPLSNSNIK-QEVNLKSCSPVPTELPQHSSPSSRKENLLEKCLKPSVRIPSGVRFLQFGK 346
               S+S  +   ++      V  +  Q ++ S+   N + K + P+  IP+G+ FL FG+
Sbjct: 654  VESSHSTPRSSSLSRSEGFKVGNQRDQSAAGSNENSNEIPKRI-PAALIPNGINFLSFGR 712

Query: 345  EP 340
             P
Sbjct: 713  AP 714


>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  174 bits (442), Expect = 7e-41
 Identities = 99/262 (37%), Positives = 141/262 (53%), Gaps = 15/262 (5%)
 Frame = -2

Query: 1038 GVKRLKLQLVAKPKPVRYCEFYLKGRCQKGDACKFSHEATPLTKSQPCKYFACNTCLKGD 859
            GVKRL+L  V+KPK V YC  YLKGRC +GD C+FSH+  PLTKS PC +FA  TC+KGD
Sbjct: 216  GVKRLRLLPVSKPKTVTYCRHYLKGRCHEGDHCRFSHDTIPLTKSSPCCHFARGTCMKGD 275

Query: 858  DCPFDHELSKYPCHNFQSKGMCLRGDNCKFSHKMSSVEDASTTSATNRSYSPPSTIASNI 679
            DCPFDH+LS YPC+N+ SKG C RGD+C FSHKM   E + T     +  S P ++ S  
Sbjct: 276  DCPFDHQLSNYPCNNYVSKGFCSRGDDCLFSHKMPLKESSPTAVNVCKPVSEPPSLPSKS 335

Query: 678  TNQ---FNVKNHSTTSRSTFSI----YEDMKKNLVDKCLKPQVPSVEGYPTASASSKSDT 520
             ++    N  +H   +  + S+      +M+K + +  LKP   +  G    ++ S   +
Sbjct: 336  YSKKLDMNGTSHQNGNSLSHSVGIFPQSNMEKKVAEIVLKPPEQASRG---INSLSFGKS 392

Query: 519  PLSNSNIKQEVNLKSCSPVPTELPQHSSPSSRKENLLEKCLKPSVRI-PSGVRFLQFGKE 343
            P+  S   +++          E+ +  +     +N+ EK  +  V + P G+ FL FGK 
Sbjct: 393  PMDYSGKLKQIGSSPTMDEGVEVDKQKN-QGEVQNMNEKAKRTPVTVPPRGINFLSFGKA 451

Query: 342  P-------SLVTNKSPSSDGKK 298
            P        L  + S   DG K
Sbjct: 452  PLNDSSVKELAGSPSNREDGNK 473


>ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
            [Brachypodium distachyon]
          Length = 685

 Score =  171 bits (433), Expect = 8e-40
 Identities = 112/322 (34%), Positives = 154/322 (47%), Gaps = 27/322 (8%)
 Frame = -2

Query: 1038 GVKRLKLQLVAKPKPVRYCEFYLKGRCQKGDACKFSHEATPLTKSQPCKYFACNTCLKGD 859
            GVKRLKL  + KPK VRYC FYL G+CQ+G+ CKFSH+ TPLTKS+PC +FA  +CLKGD
Sbjct: 415  GVKRLKLAPIIKPKVVRYCHFYLHGKCQQGNVCKFSHDTTPLTKSKPCTHFARGSCLKGD 474

Query: 858  DCPFDHELSKYPCHNFQSKGMCLRGDNCKFSHKMSSVEDASTTSATNRSYSPPSTIASNI 679
            DCP+DHELSKYPCHNF   GMCLRGD CKFSH   + +D+ST  A     S  S ++  +
Sbjct: 475  DCPYDHELSKYPCHNFLGNGMCLRGDKCKFSHVAPTADDSSTKDAKK---SDASLVSEKL 531

Query: 678  TNQFNVKNHSTTSRSTFSIYEDMKKNLVDKCLKPQVPSVEGYPTASASSKSDTPLSNSNI 499
            T++   + +S+   ST                       +G P ASA +K          
Sbjct: 532  TSK---EQNSSQKISTVH---------------------DGEPVASAPTK---------- 557

Query: 498  KQEVNLKSCSPVPTELPQHSSPSSRKENLLEKCLKPSVRIPSGVRFLQFGK---EPSLVT 328
                              H S      ++ +   K S  +P GV+FL F K   + S++ 
Sbjct: 558  ------------------HYSILKTLGSISKNAQKASAHMPKGVQFLAFSKGRSDSSILH 599

Query: 327  NKSP---------SSDGKK------PXXXXXXXXXXXXXXXXXXSKEQRNDSFRP----- 208
              +P         +++G K                           EQ+  S        
Sbjct: 600  QDAPPPGNFVGPQAAEGDKNAQPNRHRSAARSNENSSKEASSHPISEQKKTSLSADSIAV 659

Query: 207  ----ASEIELSDASKILEEFLF 154
                +++ E+S+AS+IL+EFLF
Sbjct: 660  LGSVSTQHEVSEASRILQEFLF 681


>sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
            Short=OsC3H7 gi|52076312|dbj|BAD45097.1| zinc finger
            (CCCH-type) protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  166 bits (421), Expect = 2e-38
 Identities = 76/141 (53%), Positives = 99/141 (70%)
 Frame = -2

Query: 1041 QGVKRLKLQLVAKPKPVRYCEFYLKGRCQKGDACKFSHEATPLTKSQPCKYFACNTCLKG 862
            +GVKRLKLQ V KPK V+ C FYL G+CQ+G+ CKFSH+ TPLTKS+PC ++A  +CLKG
Sbjct: 416  EGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKG 475

Query: 861  DDCPFDHELSKYPCHNFQSKGMCLRGDNCKFSHKMSSVEDASTTSATNRSYSPPSTIASN 682
            DDCP+DHELSKYPCHNF   GMC+RGD CKFSH + + E  ST  A   +       AS+
Sbjct: 476  DDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSN-------ASS 528

Query: 681  ITNQFNVKNHSTTSRSTFSIY 619
            +  + N +   T+ + T ++Y
Sbjct: 529  VPEKANCQ-EQTSRQKTSTVY 548


>gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
          Length = 698

 Score =  166 bits (421), Expect = 2e-38
 Identities = 76/141 (53%), Positives = 99/141 (70%)
 Frame = -2

Query: 1041 QGVKRLKLQLVAKPKPVRYCEFYLKGRCQKGDACKFSHEATPLTKSQPCKYFACNTCLKG 862
            +GVKRLKLQ V KPK V+ C FYL G+CQ+G+ CKFSH+ TPLTKS+PC ++A  +CLKG
Sbjct: 416  EGVKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKG 475

Query: 861  DDCPFDHELSKYPCHNFQSKGMCLRGDNCKFSHKMSSVEDASTTSATNRSYSPPSTIASN 682
            DDCP+DHELSKYPCHNF   GMC+RGD CKFSH + + E  ST  A   +       AS+
Sbjct: 476  DDCPYDHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSN-------ASS 528

Query: 681  ITNQFNVKNHSTTSRSTFSIY 619
            +  + N +   T+ + T ++Y
Sbjct: 529  VPEKANCQ-EQTSRQKTSTVY 548


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