BLASTX nr result

ID: Dioscorea21_contig00015955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015955
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   112   2e-23
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   110   9e-23
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...   110   1e-22
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...   109   2e-22
ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   109   3e-22

>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/58 (87%), Positives = 57/58 (98%)
 Frame = -2

Query: 175 AISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFKKRSVIYERALKALPGS 2
           +IS+DLYPSQDDLLYEEE+LRNPFSLKLWWRYL+ARA+APFKKR +IYERALKALPGS
Sbjct: 2   SISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGS 59


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/58 (86%), Positives = 57/58 (98%)
 Frame = -2

Query: 175 AISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFKKRSVIYERALKALPGS 2
           AI++DLYPS+DDLLYEEE+LRNPFSLKLWWRYL+AR++APFKKR VIYERALKALPGS
Sbjct: 2   AIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGS 59


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
           gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
           SYF1 [Medicago truncatula]
          Length = 925

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 181 VGAISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFKKRSVIYERALKALPGS 2
           + AIS DLYPS+DDL+YEEE+LRNPFSLKLWWRYL+AR+D+PFKKR +IYERALKALPGS
Sbjct: 1   MAAISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERALKALPGS 60


>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/58 (84%), Positives = 57/58 (98%)
 Frame = -2

Query: 175 AISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFKKRSVIYERALKALPGS 2
           AIS+DLYPSQ+DLLYEEE+LRNPFSLKLWWRYL+A+A++PFKKR +IYERALKALPGS
Sbjct: 2   AISKDLYPSQEDLLYEEELLRNPFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGS 59


>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/57 (85%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 ISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFKKRSVIYERALKALPGS 2
           I++DLYPS+DDLLYEEE+LRNPFSLKLWWRYL+AR++APFKKR VIYERALKALPGS
Sbjct: 3   IAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGS 59


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