BLASTX nr result

ID: Dioscorea21_contig00015946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015946
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   181   5e-43
ref|XP_002887115.1| zinc finger family protein [Arabidopsis lyra...   179   1e-42
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   179   2e-42
ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   179   2e-42
ref|NP_564894.1| zinc finger (MYND type) family protein / F-box ...   177   6e-42

>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
            gi|223545966|gb|EEF47469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  181 bits (458), Expect = 5e-43
 Identities = 85/151 (56%), Positives = 101/151 (66%), Gaps = 15/151 (9%)
 Frame = -1

Query: 1395 QDGYGVRRSVPDGRRFLLHANAREXXXXXXXXXXXXXXXXXXXS--------------AC 1258
            QDGYGVR+++ +GRRFL+ ANARE                                   C
Sbjct: 222  QDGYGVRQNIAEGRRFLVQANARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRHASGPGC 281

Query: 1257 PLLSDFGCAIPPLDPHPANRFLIDWFSSRRLEP-DGLRLCSHVGCGRPETRRHEFRRCSV 1081
            PLLSDFGC +P  + HPA+RF+ DWF++R   P  GLRLCSHVGCGRPETR+HEFRRCSV
Sbjct: 282  PLLSDFGCNVPAPEAHPASRFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSV 341

Query: 1080 CGLVNYCSRACQALDWKLSHKAQCAPLDRWI 988
            CG VNYCSRACQALDWKL HK +CAP++RW+
Sbjct: 342  CGAVNYCSRACQALDWKLRHKEECAPVERWV 372


>ref|XP_002887115.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297332956|gb|EFH63374.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  179 bits (455), Expect = 1e-42
 Identities = 86/147 (58%), Positives = 99/147 (67%), Gaps = 11/147 (7%)
 Frame = -1

Query: 1395 QDGYGVRRSVPDGRRFLLHANARE---------XXXXXXXXXXXXXXXXXXXSACPLLSD 1243
            QDGYGV ++V +GRRFL+ ANARE                             +CPLLSD
Sbjct: 203  QDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQTPPVPNHGQSCPLLSD 262

Query: 1242 FGCAIPPLDPHPANRFLIDWFSSR--RLEPDGLRLCSHVGCGRPETRRHEFRRCSVCGLV 1069
            FGC +P  + HPANRFL DWF+ R      DGLRLCSH GCGRPETR+HEFRRCSVCG+V
Sbjct: 263  FGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVV 322

Query: 1068 NYCSRACQALDWKLSHKAQCAPLDRWI 988
            NYCSRACQALDWKL HK  CAP++RW+
Sbjct: 323  NYCSRACQALDWKLRHKMDCAPVERWL 349


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
            gi|449494931|ref|XP_004159686.1| PREDICTED: F-box protein
            At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  179 bits (453), Expect = 2e-42
 Identities = 86/153 (56%), Positives = 101/153 (66%), Gaps = 16/153 (10%)
 Frame = -1

Query: 1395 QDGYGVRRSVPDGRRFLLHANAREXXXXXXXXXXXXXXXXXXXSA--------------- 1261
            QDGYGVR+++ +GRRFL+ ANARE                                    
Sbjct: 213  QDGYGVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSG 272

Query: 1260 CPLLSDFGCAIPPLDPHPANRFLIDWFSSRRLEP-DGLRLCSHVGCGRPETRRHEFRRCS 1084
            CPLLSDFGC IP  + HPA++FL +WF +R   P +GLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 1083 VCGLVNYCSRACQALDWKLSHKAQCAPLDRWIN 985
            VCG VNYCSRACQALDWKL HK  CAP++RW++
Sbjct: 333  VCGAVNYCSRACQALDWKLRHKIDCAPVERWLD 365


>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  179 bits (453), Expect = 2e-42
 Identities = 86/149 (57%), Positives = 100/149 (67%), Gaps = 13/149 (8%)
 Frame = -1

Query: 1395 QDGYGVRRSVPDGRRFLLHANAREXXXXXXXXXXXXXXXXXXXS------------ACPL 1252
            QDGYGVR++V +GRRFL+ ANARE                                 CPL
Sbjct: 212  QDGYGVRQNVAEGRRFLVQANARELAAVLSSASSAVSSRSWLTWNPHQHHRHVTGSGCPL 271

Query: 1251 LSDFGCAIPPLDPHPANRFLIDWFSSRRLEPD-GLRLCSHVGCGRPETRRHEFRRCSVCG 1075
            LSDFGC +P  + HPA+RFL +WF++R   P  GLRLCSH GCGRPE RRHEFRRCSVCG
Sbjct: 272  LSDFGCNVPAPEAHPASRFLAEWFAARGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSVCG 331

Query: 1074 LVNYCSRACQALDWKLSHKAQCAPLDRWI 988
            +VNYCSRACQALDWKL HKA CAP++RW+
Sbjct: 332  IVNYCSRACQALDWKLRHKAACAPVERWL 360


>ref|NP_564894.1| zinc finger (MYND type) family protein / F-box family protein
            [Arabidopsis thaliana] gi|75173237|sp|Q9FYF9.1|FB76_ARATH
            RecName: Full=F-box protein At1g67340
            gi|9828618|gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis
            thaliana] gi|16209726|gb|AAL14418.1| At1g67340/F1N21_16
            [Arabidopsis thaliana] gi|20260406|gb|AAM13101.1| unknown
            protein [Arabidopsis thaliana] gi|23197876|gb|AAN15465.1|
            unknown protein [Arabidopsis thaliana]
            gi|332196512|gb|AEE34633.1| zinc finger (MYND type)
            family protein / F-box family protein [Arabidopsis
            thaliana]
          Length = 379

 Score =  177 bits (449), Expect = 6e-42
 Identities = 86/150 (57%), Positives = 98/150 (65%), Gaps = 14/150 (9%)
 Frame = -1

Query: 1395 QDGYGVRRSVPDGRRFLLHANAREXXXXXXXXXXXXXXXXXXXS------------ACPL 1252
            QDGYGV ++V +GRRFL+ ANARE                                 CPL
Sbjct: 204  QDGYGVPQNVSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPL 263

Query: 1251 LSDFGCAIPPLDPHPANRFLIDWFSSRRLE--PDGLRLCSHVGCGRPETRRHEFRRCSVC 1078
            LSDFGC +P  + HPANRFL DWF+ R  +   DGLRLCSH GCGRPETR+HEFRRCSVC
Sbjct: 264  LSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVC 323

Query: 1077 GLVNYCSRACQALDWKLSHKAQCAPLDRWI 988
            G+VNYCSRACQALDWKL HK  CAP+ RW+
Sbjct: 324  GVVNYCSRACQALDWKLRHKMDCAPVQRWL 353


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