BLASTX nr result

ID: Dioscorea21_contig00015920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015920
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149749.1| 3-isopropylmalate dehydrogenase 2 [Zea mays]...    87   1e-15
tpg|DAA36743.1| TPA: 3-isopropylmalate dehydrogenase [Zea mays]        87   2e-15
ref|NP_001150956.1| LOC100284589 [Zea mays] gi|195643202|gb|ACG4...    87   2e-15
ref|XP_002447363.1| hypothetical protein SORBIDRAFT_06g033720 [S...    86   3e-15
gb|EAY91242.1| hypothetical protein OsI_12854 [Oryza sativa Indi...    86   4e-15

>ref|NP_001149749.1| 3-isopropylmalate dehydrogenase 2 [Zea mays]
           gi|195631103|gb|ACG36652.1| 3-isopropylmalate
           dehydrogenase 2 [Zea mays] gi|413920056|gb|AFW59988.1|
           3-isopropylmalate dehydrogenase [Zea mays]
          Length = 409

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 417 DAVLLGAIGGYKWDANEKHLKPETGLLQLRAGLGVFANLRPA 542
           DAVLLGAIGGYKWD NEKHLKPETGLLQLRAGLGVFANLRPA
Sbjct: 109 DAVLLGAIGGYKWDTNEKHLKPETGLLQLRAGLGVFANLRPA 150



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/85 (56%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
 Frame = +3

Query: 9   AALQASLRPLKAINLATNPSTFRSTTARR-----FVSFRCSAAASVSSRGYSITLLPGDG 173
           AALQA+  P+K   LAT+        AR       VSFRCSAAA    R Y+ITLLPGDG
Sbjct: 3   AALQAT--PIKT--LATSRWRVEGAEARPRPRPIAVSFRCSAAA----RSYNITLLPGDG 54

Query: 174 IGPEVVSVAKDALALAGSYEGIEFR 248
           IGPEVV+VAKD L+ AG+ EG+E R
Sbjct: 55  IGPEVVAVAKDVLSFAGALEGVELR 79


>tpg|DAA36743.1| TPA: 3-isopropylmalate dehydrogenase [Zea mays]
          Length = 407

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 417 DAVLLGAIGGYKWDANEKHLKPETGLLQLRAGLGVFANLRPA 542
           DAVLLGAIGGYKWD NEKHLKPETGLLQLRAGLGVFANLRPA
Sbjct: 107 DAVLLGAIGGYKWDNNEKHLKPETGLLQLRAGLGVFANLRPA 148



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +3

Query: 9   AALQASLRPLKAINLATNPSTFRSTTARRFV-SFRCSAAASVSSRGYSITLLPGDGIGPE 185
           AALQA+  PLK ++++           R    SFRCSAAA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLSISRRRVGGAGARPRPMAASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 186 VVSVAKDALALAGSYEGIEFR 248
           VV+VAKD L+LAG+ EG+E R
Sbjct: 57  VVAVAKDVLSLAGALEGVELR 77


>ref|NP_001150956.1| LOC100284589 [Zea mays] gi|195643202|gb|ACG41069.1|
           3-isopropylmalate dehydrogenase 2 [Zea mays]
          Length = 407

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 417 DAVLLGAIGGYKWDANEKHLKPETGLLQLRAGLGVFANLRPA 542
           DAVLLGAIGGYKWD NEKHLKPETGLLQLRAGLGVFANLRPA
Sbjct: 107 DAVLLGAIGGYKWDNNEKHLKPETGLLQLRAGLGVFANLRPA 148



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +3

Query: 9   AALQASLRPLKAINLATNPSTFRSTTARRFV-SFRCSAAASVSSRGYSITLLPGDGIGPE 185
           AALQA+  PLK ++++           R    SFRCSAAA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLSISRRRVGGAGARPRPMAASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 186 VVSVAKDALALAGSYEGIEFR 248
           VV+VAKD L+LAG+ EG+E R
Sbjct: 57  VVAVAKDVLSLAGALEGVELR 77


>ref|XP_002447363.1| hypothetical protein SORBIDRAFT_06g033720 [Sorghum bicolor]
           gi|241938546|gb|EES11691.1| hypothetical protein
           SORBIDRAFT_06g033720 [Sorghum bicolor]
          Length = 407

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 417 DAVLLGAIGGYKWDANEKHLKPETGLLQLRAGLGVFANLRPA 542
           DA+LLGAIGGYKWD NEKHLKPETGLLQLRAGLGVFANLRPA
Sbjct: 107 DAILLGAIGGYKWDNNEKHLKPETGLLQLRAGLGVFANLRPA 148



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 46/81 (56%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +3

Query: 9   AALQASLRPLKAINLATNPSTFRSTTARRFV-SFRCSAAASVSSRGYSITLLPGDGIGPE 185
           AALQA+  PLK + ++           R  V SFRCSAAA    R Y+ITLLPGDGIGPE
Sbjct: 3   AALQAT--PLKTLAISRRRVGVAGVRQRPMVASFRCSAAA----RSYNITLLPGDGIGPE 56

Query: 186 VVSVAKDALALAGSYEGIEFR 248
           VV+VAKD L+LAG+ EG+E R
Sbjct: 57  VVAVAKDVLSLAGALEGVELR 77


>gb|EAY91242.1| hypothetical protein OsI_12854 [Oryza sativa Indica Group]
           gi|125587328|gb|EAZ27992.1| hypothetical protein
           OsJ_11956 [Oryza sativa Japonica Group]
          Length = 394

 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 417 DAVLLGAIGGYKWDANEKHLKPETGLLQLRAGLGVFANLRPA 542
           DAVLLGAIGGYKWD NEKHLKPETGLLQ+RAGLGVFANLRPA
Sbjct: 94  DAVLLGAIGGYKWDNNEKHLKPETGLLQIRAGLGVFANLRPA 135



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +3

Query: 108 RCSAAASVSSRGYSITLLPGDGIGPEVVSVAKDALALAGSYEG 236
           RCSAA     R Y++TLLPGDGIGPEVV+VAKD L+LAG+ EG
Sbjct: 5   RCSAA----KRSYNVTLLPGDGIGPEVVAVAKDVLSLAGALEG 43


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