BLASTX nr result

ID: Dioscorea21_contig00015915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015915
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...   285   1e-74
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   283   7e-74
ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   281   2e-73
ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|3...   279   8e-73
ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group] g...   276   5e-72

>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  285 bits (730), Expect = 1e-74
 Identities = 146/155 (94%), Positives = 152/155 (98%)
 Frame = -1

Query: 754 VLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 575
           VLPLTEENVE VLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE
Sbjct: 82  VLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 141

Query: 574 TRLRDKIPEILAVEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEINDYVVK 395
           TRLRDKIPEI AVEQI+DTETGLELNE+NVEK+LAEIRPYLAGTGGGVLELV+INDYV+K
Sbjct: 142 TRLRDKIPEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGGVLELVQINDYVIK 201

Query: 394 VRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE 290
           VRLSGPAAGVMTVRVALTQKLREKIP IAAVQLI+
Sbjct: 202 VRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLID 236


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  283 bits (723), Expect = 7e-74
 Identities = 143/155 (92%), Positives = 151/155 (97%)
 Frame = -1

Query: 754 VLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 575
           VLPLTEENVE VLDEVRPGLMADGGNVALHEIDGLVV+LKLQGACGSCPSSTMTLKMGIE
Sbjct: 73  VLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIE 132

Query: 574 TRLRDKIPEILAVEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEINDYVVK 395
           TRLRDKIPEIL VEQI+DTETGLELNE+NVEK+L+EIRPYLAGTGGG+LE++EI DYVVK
Sbjct: 133 TRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVK 192

Query: 394 VRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE 290
           VRLSGPAAGVMTVRVALTQKLREKIP IAAVQLIE
Sbjct: 193 VRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227


>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  281 bits (720), Expect = 2e-73
 Identities = 142/155 (91%), Positives = 152/155 (98%)
 Frame = -1

Query: 754 VLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 575
           VLPLTEENVE VLDEVRPGLMADGGNV LHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE
Sbjct: 66  VLPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 125

Query: 574 TRLRDKIPEILAVEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEINDYVVK 395
           TRLRDKIPEI+AVEQI+DTETGLELN++NVEK+LAEIRPYLAGTGGGVLELV+I+DY+VK
Sbjct: 126 TRLRDKIPEIMAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYIVK 185

Query: 394 VRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE 290
           VRLSGPAAGVMTVRVALTQKLR+KIP IAAVQLI+
Sbjct: 186 VRLSGPAAGVMTVRVALTQKLRDKIPAIAAVQLID 220


>ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|355484005|gb|AES65208.1|
           NifU-like protein [Medicago truncatula]
          Length = 242

 Score =  279 bits (714), Expect = 8e-73
 Identities = 142/155 (91%), Positives = 148/155 (95%)
 Frame = -1

Query: 754 VLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 575
           VLPLTEENVE VLDEVRPGLMADGGNVALHEIDGLVV+LKLQGACGSCPSSTMTLKMGIE
Sbjct: 88  VLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIE 147

Query: 574 TRLRDKIPEILAVEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEINDYVVK 395
           TRLRDKIPEIL VEQI+DTETGLEL EDNVE +L+EIRPYL GTGGG LELVEINDY+VK
Sbjct: 148 TRLRDKIPEILEVEQILDTETGLELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVK 207

Query: 394 VRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE 290
           VRLSGPAAGVMTVRVALTQKLR+KIP IAAVQLIE
Sbjct: 208 VRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 242


>ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group]
           gi|53791826|dbj|BAD53892.1| putative Nuclear-encoded
           plastid gene, NifU1 [Oryza sativa Japonica Group]
           gi|53792847|dbj|BAD53880.1| putative Nuclear-encoded
           plastid gene, NifU1 [Oryza sativa Japonica Group]
           gi|113596483|dbj|BAF20357.1| Os06g0694500 [Oryza sativa
           Japonica Group] gi|215678926|dbj|BAG96356.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215695250|dbj|BAG90441.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218198813|gb|EEC81240.1| hypothetical protein
           OsI_24300 [Oryza sativa Indica Group]
           gi|222636145|gb|EEE66277.1| hypothetical protein
           OsJ_22478 [Oryza sativa Japonica Group]
          Length = 219

 Score =  276 bits (707), Expect = 5e-72
 Identities = 140/160 (87%), Positives = 151/160 (94%)
 Frame = -1

Query: 769 GWRVRVLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTL 590
           GW VRVLPLTEENVEMVLD+VRP LMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTL
Sbjct: 60  GWAVRVLPLTEENVEMVLDQVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTL 119

Query: 589 KMGIETRLRDKIPEILAVEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEIN 410
           KMGIETRLRDKIPEILAVEQI+DTETGLELN DNV+K+L EIRPYL+GTGGG L+LV+I+
Sbjct: 120 KMGIETRLRDKIPEILAVEQIVDTETGLELNHDNVDKVLDEIRPYLSGTGGGSLDLVQID 179

Query: 409 DYVVKVRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE 290
           + VVKVRL+GPAAGVMTVRVA+TQKLREKIP I AVQL E
Sbjct: 180 ESVVKVRLTGPAAGVMTVRVAVTQKLREKIPSILAVQLTE 219


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