BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015909
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   324   5e-87
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   323   9e-87
ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|2...   318   5e-85
ref|XP_002311357.1| predicted protein [Populus trichocarpa] gi|2...   314   7e-84
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar...   311   6e-83

>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  324 bits (831), Expect = 5e-87
 Identities = 150/187 (80%), Positives = 176/187 (94%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQFPWTTSTYNNVIE 382
           MEKWYEKFR+FGIEPE+RTFNILIGAYGKKRMY+KM+SV+EYMR+LQFPWTTSTYNNVIE
Sbjct: 305 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 364

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
           AF+DVGDA+N+E +F+QMRAEGMKADTKTFCCLI GY+NAGLFHKVVSS+QLA + E+P 
Sbjct: 365 AFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPE 424

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
           N SFYNA+ISACAKA DL+EMERVF RMKD+H  PDS TYSI+V+AY+KEGMNDKI+DLE
Sbjct: 425 NTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLE 484

Query: 21  QEQQKLI 1
           QE+Q+++
Sbjct: 485 QERQRMV 491



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYM-RRLQFPWTTSTYNNVI 385
           +E  YE+     I P + T NI++  YGK   +++M  VL  M           T N ++
Sbjct: 234 VESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTIL 293

Query: 384 EAFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVP 205
             F + G    +E  + + R  G++ +T+TF  LI  Y    ++ K+ S ++   +L+ P
Sbjct: 294 SLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353

Query: 204 ANVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKI 34
              S YN +I A +  GD   ME  F +M+      D+ T+  L+  Y   G+  K+
Sbjct: 354 WTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKV 410



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
 Frame = -1

Query: 528 GIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRL-QFPWTTSTYNNVIEAFADVGDARN 352
           G EP +  +  L+ +Y +  + ++  S+L  M+ L +      TY+ +++A  D      
Sbjct: 174 GCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFEL 233

Query: 351 VELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQ-LAERLEVPANVSFYNAII 175
           VE  + +M    +  +T T   +++GY  AG F ++   +  + E      +V   N I+
Sbjct: 234 VESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTIL 293

Query: 174 SACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLEQEQQKL 4
           S     G +  ME+ + + ++    P++ T++IL+ AY K+ M DK+  + +  +KL
Sbjct: 294 SLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  323 bits (829), Expect = 9e-87
 Identities = 150/187 (80%), Positives = 176/187 (94%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQFPWTTSTYNNVIE 382
           MEKWYEKFR+FGIEPE+RTFNILIGAYGKKRMY+KM+SV+EYMR+LQFPWTTSTYNNVIE
Sbjct: 305 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 364

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
           AF+DVGDA+N+E +F+QMRAEGMKADTKTFCCLI GY+NAGLFHKVVSS+QLA + E+P 
Sbjct: 365 AFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPE 424

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
           N SFYNA+ISACAKA DL+EMERVF RMKD+H  PDS TYSI+V+AY+KEGMNDKI+DLE
Sbjct: 425 NTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLE 484

Query: 21  QEQQKLI 1
           QE+Q+++
Sbjct: 485 QERQRMM 491



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYM-RRLQFPWTTSTYNNVI 385
           +E  YE+     I P + T NI++  YGK   +++M  VL  M           T N ++
Sbjct: 234 VESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTIL 293

Query: 384 EAFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVP 205
             F + G    +E  + + R  G++ +T+TF  LI  Y    ++ K+ S ++   +L+ P
Sbjct: 294 SLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353

Query: 204 ANVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKI 34
              S YN +I A +  GD   ME  F +M+      D+ T+  L+  Y   G+  K+
Sbjct: 354 WTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKV 410



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
 Frame = -1

Query: 528 GIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRL-QFPWTTSTYNNVIEAFADVGDARN 352
           G EP +  +  L+ +Y +  + ++  S+L  M+ L +      TY+ +++A  D      
Sbjct: 174 GCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFEL 233

Query: 351 VELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQ-LAERLEVPANVSFYNAII 175
           VE  + +M    +  +T T   +++GY  AG F ++   +  + E      +V   N I+
Sbjct: 234 VESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTIL 293

Query: 174 SACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLEQEQQKL 4
           S     G +  ME+ + + ++    P++ T++IL+ AY K+ M DK+  + +  +KL
Sbjct: 294 SLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350


>ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|222865115|gb|EEF02246.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  318 bits (814), Expect = 5e-85
 Identities = 147/187 (78%), Positives = 175/187 (93%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQFPWTTSTYNNVIE 382
           ME+WYEKFR+FGIEPE+RTFNILIGAYGKKRMY+KM+SV+EYMR++QFPWTTSTYNNVIE
Sbjct: 248 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTTSTYNNVIE 307

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
           AFADVGDA+N+E +F+QMRAE MKADTKTFCCLINGY+NAGLFHKV+SS+QLA + E+P 
Sbjct: 308 AFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 367

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
           N SF+NA+ISACAKA DLMEMERVF+RMKD+   PDS TYSI+V+AY+KEGMNDKI+ LE
Sbjct: 368 NTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYSIMVEAYRKEGMNDKIYYLE 427

Query: 21  QEQQKLI 1
           QE+Q++I
Sbjct: 428 QEKQEMI 434



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
 Frame = -1

Query: 549 YEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVL-EYMRRLQFPWTTSTYNNVIEAFA 373
           Y++     I P + T N+++  YG+  MY++M  VL E +          T N ++  F 
Sbjct: 181 YQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIILSVFG 240

Query: 372 DVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPANVS 193
           + G    +E  + + R  G++ +T+TF  LI  Y    ++ K+ S ++   +++ P   S
Sbjct: 241 NEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTTS 300

Query: 192 FYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLEQ 19
            YN +I A A  GD   ME  F +M+      D+ T+  L++ Y   G+  K+    Q
Sbjct: 301 TYNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQ 358



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/177 (22%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
 Frame = -1

Query: 528 GIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRL-QFPWTTSTYNNVIEAFADVGDARN 352
           GIEP +  +  L+ AY +  + ++  S++  M+ L +      TY+ +++A  D      
Sbjct: 117 GIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDASRFEL 176

Query: 351 VELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSI-QLAERLEVPANVSFYNAII 175
           ++  + +M    +  +T T   +++GY   G++ ++   + ++ E      +V   N I+
Sbjct: 177 IDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIIL 236

Query: 174 SACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLEQEQQKL 4
           S     G +  MER + + ++    P++ T++IL+ AY K+ M DK+  + +  +K+
Sbjct: 237 SVFGNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKV 293


>ref|XP_002311357.1| predicted protein [Populus trichocarpa] gi|222851177|gb|EEE88724.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score =  314 bits (804), Expect = 7e-84
 Identities = 145/187 (77%), Positives = 173/187 (92%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQFPWTTSTYNNVIE 382
           ME+WYEKFR+FGIEPE+RTFNILIGAYGKKRMY+ M+SV+EYMR+LQFPWTTSTYNNVIE
Sbjct: 176 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDNMSSVMEYMRKLQFPWTTSTYNNVIE 235

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
           AFADVGDA+N+E +F+QMRAE MKADTKTFCCLINGY+NAGLFHKV+SS+QLA + E+P 
Sbjct: 236 AFADVGDAKNMEYTFDQMRAEDMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 295

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
           N S Y A+ISACAKA DL+EMERVF++MKD+  +PDS TYSI+V+AY+KEGMNDKI+ LE
Sbjct: 296 NTSLYKAVISACAKADDLVEMERVFKQMKDKQCLPDSRTYSIMVEAYRKEGMNDKIYYLE 355

Query: 21  QEQQKLI 1
           QE+QK+I
Sbjct: 356 QEKQKMI 362



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
 Frame = -1

Query: 549 YEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQF----PWTTSTYNNVIE 382
           Y++     I P + T NI++  +GK  MY++M  VL  M   +      W   T N ++ 
Sbjct: 109 YQEMDERLISPNTVTQNIVLSGFGKVGMYDQMERVLSGMLESKTCKPDVW---TMNIILS 165

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
            F + G    +E  + + R  G++ +T+TF  LI  Y    ++  + S ++   +L+ P 
Sbjct: 166 VFGNKGHVDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDNMSSVMEYMRKLQFPW 225

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
             S YN +I A A  GD   ME  F +M+      D+ T+  L++ Y   G+  K+    
Sbjct: 226 TTSTYNNVIEAFADVGDAKNMEYTFDQMRAEDMKADTKTFCCLINGYANAGLFHKVISSV 285

Query: 21  Q 19
           Q
Sbjct: 286 Q 286


>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2750; Flags: Precursor
           gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
           [Arabidopsis thaliana] gi|20466300|gb|AAM20467.1|
           unknown protein [Arabidopsis thaliana]
           gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis
           thaliana] gi|332640870|gb|AEE74391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 486

 Score =  311 bits (796), Expect = 6e-83
 Identities = 142/187 (75%), Positives = 174/187 (93%)
 Frame = -1

Query: 561 MEKWYEKFRSFGIEPESRTFNILIGAYGKKRMYNKMTSVLEYMRRLQFPWTTSTYNNVIE 382
           ME WYEKFR+FGIEPE+RTFNILIG+YGKKRMY+KM+SV+EYMR+L+FPWTTSTYNN+IE
Sbjct: 285 MESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIE 344

Query: 381 AFADVGDARNVELSFNQMRAEGMKADTKTFCCLINGYSNAGLFHKVVSSIQLAERLEVPA 202
           AFADVGDA+N+EL+F+QMR+EGMKADTKTFCCLINGY+NAGLFHKV+SS+QLA + E+P 
Sbjct: 345 AFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 404

Query: 201 NVSFYNAIISACAKAGDLMEMERVFRRMKDRHFIPDSMTYSILVDAYQKEGMNDKIFDLE 22
           N +FYNA+ISACAKA DL+EMERV+ RMK+R  + DS T+ I+V+AY+KEGMNDKI+ LE
Sbjct: 405 NTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLE 464

Query: 21  QEQQKLI 1
           QE+QKL+
Sbjct: 465 QERQKLM 471