BLASTX nr result

ID: Dioscorea21_contig00015905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015905
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307590.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002300838.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|AFW67286.1| hypothetical protein ZEAMMB73_929047 [Zea mays]         57   2e-06
gb|AFW67285.1| hypothetical protein ZEAMMB73_929047 [Zea mays]         57   2e-06
ref|XP_002466252.1| hypothetical protein SORBIDRAFT_01g004400 [S...    57   2e-06

>ref|XP_002307590.1| predicted protein [Populus trichocarpa] gi|222857039|gb|EEE94586.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/44 (63%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 216 MRDFPSCFGESGVQIAD-XXXXXXRASQNLVTCLYRTEVHGCSC 344
           MRDFPSCFGESGVQ+AD       +A+QNLVTC+Y+ ++HG SC
Sbjct: 1   MRDFPSCFGESGVQVADSSSSSTTKAAQNLVTCVYQCKLHGRSC 44


>ref|XP_002300838.1| predicted protein [Populus trichocarpa] gi|222842564|gb|EEE80111.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 216 MRDFPSCFGESGVQIAD-XXXXXXRASQNLVTCLYRTEVHGCSC 344
           MRDFPSCFGESGVQ+AD       +A+QNLVTC+Y+ ++ G SC
Sbjct: 1   MRDFPSCFGESGVQVADSSSSSTTKAAQNLVTCVYQCKLRGRSC 44


>gb|AFW67286.1| hypothetical protein ZEAMMB73_929047 [Zea mays]
          Length = 214

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
 Frame = +3

Query: 216 MRDFPSCFGESGVQIADXXXXXXR----ASQNLVTCLYRTEVHGCSC 344
           MRDFPSCFGESGVQIAD           A+QNLVTCLY+T+  G  C
Sbjct: 1   MRDFPSCFGESGVQIADASSSSSSAGKGAAQNLVTCLYQTQFSGRPC 47


>gb|AFW67285.1| hypothetical protein ZEAMMB73_929047 [Zea mays]
          Length = 291

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
 Frame = +3

Query: 216 MRDFPSCFGESGVQIADXXXXXXR----ASQNLVTCLYRTEVHGCSC 344
           MRDFPSCFGESGVQIAD           A+QNLVTCLY+T+  G  C
Sbjct: 1   MRDFPSCFGESGVQIADASSSSSSAGKGAAQNLVTCLYQTQFSGRPC 47


>ref|XP_002466252.1| hypothetical protein SORBIDRAFT_01g004400 [Sorghum bicolor]
           gi|241920106|gb|EER93250.1| hypothetical protein
           SORBIDRAFT_01g004400 [Sorghum bicolor]
          Length = 291

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
 Frame = +3

Query: 216 MRDFPSCFGESGVQIADXXXXXXR----ASQNLVTCLYRTEVHGCSC 344
           MRDFPSCFGESGVQIAD           A+QNLVTCLY+T+  G  C
Sbjct: 1   MRDFPSCFGESGVQIADASSSSSSAGKGAAQNLVTCLYQTQFSGRPC 47


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