BLASTX nr result

ID: Dioscorea21_contig00015875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015875
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]   199   2e-48
emb|CBI30363.3| unnamed protein product [Vitis vinifera]              184   6e-44
ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-41
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...   162   4e-37
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843...   155   5e-35

>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score =  199 bits (507), Expect = 2e-48
 Identities = 132/332 (39%), Positives = 182/332 (54%), Gaps = 15/332 (4%)
 Frame = -3

Query: 2119 MSLYVGHVPPHVRRDDIERVFQRFGRCKVQLKSGYGFVVYDAIANAEKALRMMRGKIICG 1940
            MSLY+G++  H+RRDD+ERVF RFGRC +QLK GYGF VYD  ANA+KA+R MRGK ICG
Sbjct: 1    MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60

Query: 1939 EQLSLGWSNRQPKPLKRADRSIRTFEPYSRRQFKEIHDRVGPGRAQGQRDFETGSSHARA 1760
            E++SL WSN+QP+  +R  RS      Y  ++ +  + ++G   ++ QR ++ G    + 
Sbjct: 61   ERISLTWSNKQPRGXQRGARS------YELQRGRXSNRKLG---SKSQRGYKXG---VKK 108

Query: 1759 FDHSGNRSDYAS--DREAGNIGNNI------GHIEEGKGFSSKEGLANEINPVENDRWGE 1604
             D  G RSD     D E     +NI       H   G+   S EG + E + V+NDRWG+
Sbjct: 109  LDRDGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENL-SYEGGSIEPDAVDNDRWGQ 167

Query: 1603 PVIDPLIGHDGENHNDFDRYEPYHGLDRSYE-DKTQIDSLFSSPEHAIPNEKVQRERSIE 1427
             V +   G+  EN  +FDRYEPYHG DRS E D  Q+     SP      EK  RE+  +
Sbjct: 168  HVGNLSNGNGLENGMEFDRYEPYHGEDRSNEXDNIQMTYSGGSPTLRSTQEKTGREQIGD 227

Query: 1426 KTDMRLIKQKTHQVCYRCGVVGHIARECPEGYARRERFGKYKHKR-EEVNSRSSAAVKRP 1250
               +     K    CY CG  GH  R C +G A +++F ++  KR +E+N R S   + P
Sbjct: 228  AILLPSNIPKPQLXCYHCGRPGHKMRNCLQGNASQKKFSRFDLKRNDEINLRGSGGGELP 287

Query: 1249 RYNSLGKP-----VGTKYPSMLEKHGRDKEKS 1169
            R  S  KP      G++    L  H  D++ S
Sbjct: 288  RTGS--KPHEKGHSGSRDTISLRWHTNDRKAS 317



 Score =  119 bits (298), Expect = 3e-24
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = -3

Query: 415 SSRVTAQELFLALRHYGLATPDEDESGISTEKYFGAARLWPWEIIYLRRMKKGAISTENY 236
           S+ ++++E+F  L++YGL   ++++  +  E YFG+ARLWPWEIIY RR+KKG ISTENY
Sbjct: 595 STCISSEEVFKILKYYGLEHSEDNKMHLPVEDYFGSARLWPWEIIYYRRLKKGPISTENY 654

Query: 235 ARRLEQNQQFGIADKYIRSSSGWGECDQTN 146
            RR+ QN++FGI DKYIRSSSGWGE  Q N
Sbjct: 655 DRRIAQNREFGIVDKYIRSSSGWGELVQDN 684


>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  184 bits (468), Expect = 6e-44
 Identities = 127/332 (38%), Positives = 176/332 (53%), Gaps = 15/332 (4%)
 Frame = -3

Query: 2119 MSLYVGHVPPHVRRDDIERVFQRFGRCKVQLKSGYGFVVYDAIANAEKALRMMRGKIICG 1940
            MSLY+G++  H+RRDD+ERVF RFGRC +QLK GYGF VYD  ANA+KA+R MRGK ICG
Sbjct: 1    MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60

Query: 1939 EQLSLGWSNRQPKPLKRADRSIRTFEPYSRRQFKEIHDRVGPGRAQGQRDFETGSSHARA 1760
            E++SL WSN+QP+  +R  RS      Y  ++ +  + ++G   ++ QR ++ G    + 
Sbjct: 61   ERISLTWSNKQPRGFQRGARS------YELQRGRISNRKLG---SKSQRGYKVG---VKK 108

Query: 1759 FDHSGNRSDYAS--DREAGNIGNNI------GHIEEGKGFSSKEGLANEINPVENDRWGE 1604
             D  G RSD     D E     +NI       H   G+   S EG + E + V+NDRWG+
Sbjct: 109  LDRDGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENL-SYEGGSIEPDAVDNDRWGQ 167

Query: 1603 PVIDPLIGHDGENHNDFDRYEPYHGLDRSYE-DKTQIDSLFSSPEHAIPNEKVQRERSIE 1427
             V +   G+  EN  +FDRYEPYHG DRS E D  Q+     SP      EK  RE+   
Sbjct: 168  HVGNLSNGNGLENGMEFDRYEPYHGEDRSNEDDNIQMTYSGGSPTLRSTQEKTGREQ--- 224

Query: 1426 KTDMRLIKQKTHQVCYRCGVVGHIARECPEGYARRERFGKYKHKR-EEVNSRSSAAVKRP 1250
                                +GH  R C +G A +++F ++  KR +E+N R S   + P
Sbjct: 225  --------------------IGHKMRNCLQGNASQKKFSRFDLKRNDEINLRGSGGGELP 264

Query: 1249 RYNSLGKP-----VGTKYPSMLEKHGRDKEKS 1169
            R  S  KP      G++    L  H  D++ S
Sbjct: 265  RTGS--KPHEKGHSGSRDTISLRWHTNDRKAS 294



 Score =  120 bits (300), Expect = 2e-24
 Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
 Frame = -3

Query: 568 TPDGVAAESFEQKE--WNPSIGILKDAASPGKLSENKLQGSSTRELNNCMTIPSSRVTAQ 395
           TP  ++ ES  +     N    +++   +P K  +++    S    + C       ++++
Sbjct: 502 TPTILSPESLRETAELQNSGAWMMEHLLAPTKKPDSEAMAGSFAGNSTC-------ISSE 554

Query: 394 ELFLALRHYGLATPDEDESGISTEKYFGAARLWPWEIIYLRRMKKGAISTENYARRLEQN 215
           E+F  L++YGL   ++++  +  E YFG+ARLWPWEIIY RR+KKG ISTENY RR+ QN
Sbjct: 555 EVFKILKYYGLEHSEDNKMHLPVEDYFGSARLWPWEIIYYRRLKKGPISTENYDRRIAQN 614

Query: 214 QQFGIADKYIRSSSGWGECDQTN 146
           ++FGI DKYIRSSSGWGE  Q N
Sbjct: 615 REFGIVDKYIRSSSGWGELVQDN 637


>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
            predicted protein [Populus trichocarpa]
          Length = 693

 Score =  176 bits (445), Expect = 3e-41
 Identities = 109/306 (35%), Positives = 163/306 (53%), Gaps = 13/306 (4%)
 Frame = -3

Query: 2119 MSLYVGHVPPHVRRDDIERVFQRFGRCKVQLKSGYGFVVYDAIANAEKALRMMRGKIICG 1940
            MSL++G++  H+RRD++ERVFQRFGRC V++K GYGFVVY+   NAEKALR +  + ICG
Sbjct: 1    MSLHIGNLSSHIRRDELERVFQRFGRCNVRMKDGYGFVVYEFPPNAEKALRALHKRNICG 60

Query: 1939 EQLSLGWSNRQPKPLKRADRSIRTFEPYSRRQFKEIHDRVGPG-RAQGQRDFETGSSHAR 1763
            + L+L WSN+QP+PLKR  R+ R++EP  R       D V     +  Q+D+    + A 
Sbjct: 61   KPLTLSWSNKQPRPLKRFARTDRSYEPQHRGNSDRGGDHVKRKLGSNDQQDYRLSFTQA- 119

Query: 1762 AFDHSGNRSDYASDREAGNIGNNIGHIE-----EGKGFSSKEGLANE-----INPVENDR 1613
                  +R   ++D     I N+   IE     E +G+  +E   +E      +P++NDR
Sbjct: 120  ---DRNSRIPSSADMHQEEIVNHQDDIEDHTNKEHQGY--REDFLDERGRVGPDPMDNDR 174

Query: 1612 WGEPVIDPLIGHDGENHNDFDRYEPYHGLDRSYEDKTQIDSLFSSPEHAIPN--EKVQRE 1439
            WGE   +P      EN  +FDRY+PY G DR   D+  +   +S    A+ +  E    +
Sbjct: 175  WGEQFHNPPNEVGVENGVEFDRYDPYEGFDRRNNDE-NLQKAYSGGTLALQSSQENAGGD 233

Query: 1438 RSIEKTDMRLIKQKTHQVCYRCGVVGHIARECPEGYARRERFGKYKHKREEVNSRSSAAV 1259
             + + T  RL   K+ + CY+CG  GH  R CP+  A +    ++  +  +   RS    
Sbjct: 234  HASDATLNRLSDVKSQETCYKCGGSGHKMRNCPQENASQRNVTRFDSRHTDDIHRSGRGK 293

Query: 1258 KRPRYN 1241
              P  N
Sbjct: 294  GDPEKN 299



 Score =  125 bits (314), Expect = 5e-26
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = -3

Query: 415 SSRVTAQELFLALRHYGLATPDEDESGISTEKYFGAARLWPWEIIYLRRMKKGAISTENY 236
           S+ ++A EL   L+HYGL   DE+E  +  E YFG+ARLWPWEII+ RR+KKG IS ENY
Sbjct: 603 STSISAGELSSVLKHYGLGCQDENEKPLPAEAYFGSARLWPWEIIHYRRLKKGLISIENY 662

Query: 235 ARRLEQNQQFGIADKYIRSSSGWGECDQTN 146
           ARR++QN++FGI DKYIRSSSGWGE  Q N
Sbjct: 663 ARRVDQNREFGIVDKYIRSSSGWGELHQEN 692


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
            gi|223530325|gb|EEF32219.1| Splicing factor,
            arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score =  162 bits (409), Expect = 4e-37
 Identities = 124/364 (34%), Positives = 174/364 (47%), Gaps = 43/364 (11%)
 Frame = -3

Query: 2119 MSLYVGHVPPHVRRDDIERVFQRFGRCKVQLKSGYGFVVYDAIANAEKALRMMRGKIICG 1940
            MSLY+G++   +RRD++ERVFQRFG+C V+LK GYGFVVY+   NAEKALR +  K ICG
Sbjct: 1    MSLYIGNLSSRIRRDELERVFQRFGQCDVRLKDGYGFVVYEFPPNAEKALRALEKKHICG 60

Query: 1939 EQLSLGWSNRQPKPLKRADRS-IRTFEPYSRRQFKEIHDRVGPGRAQGQRDFETGSSHAR 1763
            E L+L WSN+QP+   R  R+  R++EP   R      D V         D+ T    + 
Sbjct: 61   EALNLTWSNKQPRQFNRLARAGGRSYEPQHSR------DSVKGKLGSNVLDYRTSVKQSD 114

Query: 1762 AFDH---SGNRSD----YASDREAGNIGN-NIGHIEEGKGFSSKEGLANEINPVENDRWG 1607
             F     S N  D    Y  +R   N G+ + G+ EE  G    EG   E + VENDRWG
Sbjct: 115  GFSKRSASTNMRDKEVMYDKNRAKDNFGDEHSGYREEFLG----EGGRFESDRVENDRWG 170

Query: 1606 EPVIDPLIGHDGENHNDFDRYEPYHGLDRSYEDKT-QIDSLFSSPEHAIPNEKVQRERSI 1430
            E +   L  +  +N   F+RYEP    +R Y+    Q+     SP    P + + R+ S 
Sbjct: 171  EQLHYQLNENGLKNDVVFERYEPCPDYERKYDSGVHQLAYRGGSPALRRPQKDIGRDNSN 230

Query: 1429 EKTDMRLIKQKTHQ-VCYRCGVVGHIARECPE---------------------GYARRER 1316
            E  +++  +    Q  CY+CG  GH  R CP+                     G + R R
Sbjct: 231  E-VNLKCSRDANFQATCYQCGGSGHKMRNCPQESSSLRNSTRSDPRHDDRRGSGGSERRR 289

Query: 1315 FGKYKHKREEVNSRSSAAVKR-PRYNSLGK----------PVGTKYPSMLEKHGRDKEKS 1169
            FG    +R   +S     +K   + +SLGK          PVG +    L+ H    ++S
Sbjct: 290  FGSRSQERSSRDSMPKRLLKNDTKSSSLGKDQKSIWNGSSPVGNETDKSLKTHDGGNKRS 349

Query: 1168 QLPI 1157
            +  I
Sbjct: 350  RKEI 353



 Score =  114 bits (284), Expect = 1e-22
 Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = -3

Query: 415 SSRVTAQELFLALRHY-GLATPDEDESGISTEKYFGAARLWPWEIIYLRRMKKGAISTEN 239
           S  ++++EL L ++HY G    +E++  +  + YFG+ARLWPWEIIY RR+KKG IS EN
Sbjct: 586 SLSISSEELHLVIKHYYGHDLQNENQRHLPADAYFGSARLWPWEIIYYRRLKKGPISVEN 645

Query: 238 YARRLEQNQQFGIADKYIRSSSGWGECDQTN 146
           YARRL+QN++FG+ DKYIRSSSGW E  Q N
Sbjct: 646 YARRLDQNREFGVVDKYIRSSSGWEELTQEN 676


>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
            distachyon]
          Length = 628

 Score =  155 bits (391), Expect = 5e-35
 Identities = 96/273 (35%), Positives = 145/273 (53%)
 Frame = -3

Query: 2119 MSLYVGHVPPHVRRDDIERVFQRFGRCKVQLKSGYGFVVYDAIANAEKALRMMRGKIICG 1940
            MSL++G +  HVR+  +E +FQ FGRC V+LK+GYGF V+D+  +A +ALR + GK +CG
Sbjct: 1    MSLHIGRLSSHVRQGYLEHLFQAFGRCTVKLKNGYGFAVFDSSDDAARALRELHGKPVCG 60

Query: 1939 EQLSLGWSNRQPKPLKRADRSIRTFEPYSRRQFKEIHDRVGPGRAQGQRDFETGSSHARA 1760
            E++++ WS  QPK    + RS R  E    R+ K   D VG  R     D +   +    
Sbjct: 61   ERITVNWSKHQPKFSLSSRRSSRFIESSHGRRSK---DGVGSLRFSEPADQKNHHTSNAT 117

Query: 1759 FDHSGNRSDYASDREAGNIGNNIGHIEEGKGFSSKEGLANEINPVENDRWGEPVIDPLIG 1580
              +    ++  SD+ A  +  ++G  E+       +G  ++ N +E+DRWG    D   G
Sbjct: 118  SCNPDGAAEKRSDQNAEGL-EDVGDDEDPGEMKMGDGGTSDANAIEHDRWG----DAGKG 172

Query: 1579 HDGENHNDFDRYEPYHGLDRSYEDKTQIDSLFSSPEHAIPNEKVQRERSIEKTDMRLIKQ 1400
            + GE+ +DFDR+EPYHG  +  E+K +I       +H   +E V +   +E  D+   K 
Sbjct: 173  NHGEDGDDFDRFEPYHGYGKK-EEKEKI----GKADHGHFSE-VWQNHPVEHFDLNHDKP 226

Query: 1399 KTHQVCYRCGVVGHIARECPEGYARRERFGKYK 1301
            K    CY CG  GH+ R C E     E  GK+K
Sbjct: 227  KYCPTCYNCGSAGHVTRNCSE-----EAVGKFK 254



 Score =  115 bits (288), Expect = 5e-23
 Identities = 73/181 (40%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
 Frame = -3

Query: 676 VANTEKSELKGSFLTSKDENAFAFTDVDSKSYGHHPTPDGVAAESFEQKEWNPSIGILKD 497
           V +  K E  GS   S +E     + +++ S G  P P G   +     E N   G++ D
Sbjct: 450 VKDDYKQEAGGS--RSNNEVPVTSSKLNTLSNGELPVP-GKDVKVAGHTEANLHKGVVDD 506

Query: 496 AASPGKLSENKLQG---SSTRELNNCMTIPSSR-----VTAQELFLALRHYGLATPDEDE 341
                ++   K      SS ++ N      S R     +T  E+  AL+HYG+   +   
Sbjct: 507 DIVGNRVPGQKTNPGYTSSVKKPNKENLAKSGRDISLKLTMNEVVSALKHYGMEAREIGL 566

Query: 340 SGISTEKYFGAARLWPWEIIYLRRMKKGAISTENYARRLEQNQQFGIADKYIRSSSGWGE 161
                EK+FGAARLWPWEIIY RR KKG ISTENYA+R+EQN++FGI D+Y+RSSSGW E
Sbjct: 567 LNQPVEKFFGAARLWPWEIIYYRRRKKGPISTENYAKRVEQNKEFGIVDQYVRSSSGWWE 626

Query: 160 C 158
           C
Sbjct: 627 C 627


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