BLASTX nr result

ID: Dioscorea21_contig00015872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015872
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445339.1| hypothetical protein SORBIDRAFT_07g010220 [S...   410   e-112
dbj|BAC99611.1| putative SKP1 interacting partner 1 [Oryza sativ...   405   e-110
ref|NP_001148783.1| LOC100282400 [Zea mays] gi|195622138|gb|ACG3...   405   e-110
gb|EAZ06304.1| hypothetical protein OsI_28538 [Oryza sativa Indi...   404   e-110
gb|ACF84778.1| unknown [Zea mays]                                     401   e-109

>ref|XP_002445339.1| hypothetical protein SORBIDRAFT_07g010220 [Sorghum bicolor]
            gi|241941689|gb|EES14834.1| hypothetical protein
            SORBIDRAFT_07g010220 [Sorghum bicolor]
          Length = 316

 Score =  410 bits (1053), Expect = e-112
 Identities = 197/304 (64%), Positives = 231/304 (75%), Gaps = 4/304 (1%)
 Frame = -3

Query: 1212 ATAETRDWSDMTPVLLVNVFRRLSLEDRWRGVMLACKTWLEAARD-PALFESFDLEPFFG 1036
            A+ E RDWSDMTPV L   F RL+LED WRG M  C++W +AAR  P LF   +LEP F 
Sbjct: 13   ASEEARDWSDMTPVCLAEAFSRLALEDLWRGAMACCRSWRDAARSRPGLFAVLNLEPGFA 72

Query: 1035 RFS---DAAAWWTPAFQRRVDSMVRLVAVVGGPTLRTVRVRHCSDRALELVAERCPNLEI 865
              +   +AAAWWTPAFQRR D+M+R  A +    L  +RVRHCSD ALE  AER   L I
Sbjct: 73   ESTPGAEAAAWWTPAFQRRADAMLRSAATLAAGELCEIRVRHCSDDALEFAAERSLKLSI 132

Query: 864  LSVKNSQSVTDTSMIRIAFGCHMLTELDISSCYEISYKSLELIGQNCPNLTVLKRNLLNW 685
            LS+K S ++TD SM+ +   C MLTELDIS+CY++SYKSLE+IGQ+C NL VLKRN+ NW
Sbjct: 133  LSIKTSPAITDRSMLTVGACCPMLTELDISNCYDVSYKSLEVIGQSCQNLRVLKRNIFNW 192

Query: 684  LDPSQHAGIVPDDYINACPQDGDREASVISKFMPKLKHLELRFSKLFINGLISISEGCKD 505
            +DPS+H GIVP+DY+  CP+DGDREA  ISKFMPKLKHLELRFSKL   GL SI EGCKD
Sbjct: 193  IDPSEHVGIVPEDYLRECPEDGDREAITISKFMPKLKHLELRFSKLTAVGLNSIPEGCKD 252

Query: 504  IETLDLFGCVNLTSRALDQTSKNMKNLKVLVRPNFYIPRSVFHTERYGHWRLYDERFQTN 325
            +E LDLFGC NLTSR +DQ + N+KNL  LV+PNFYIPRS FH  RYGHW+LYDERFQTN
Sbjct: 253  LEVLDLFGCANLTSRGIDQAAANLKNLVTLVKPNFYIPRSSFHMGRYGHWQLYDERFQTN 312

Query: 324  VFQI 313
            VFQI
Sbjct: 313  VFQI 316


>dbj|BAC99611.1| putative SKP1 interacting partner 1 [Oryza sativa Japonica Group]
            gi|125602801|gb|EAZ42126.1| hypothetical protein
            OsJ_26685 [Oryza sativa Japonica Group]
          Length = 314

 Score =  405 bits (1041), Expect = e-110
 Identities = 197/304 (64%), Positives = 227/304 (74%), Gaps = 2/304 (0%)
 Frame = -3

Query: 1218 TGATAETRDWSDMTPVLLVNVFRRLSLEDRWRGVMLACKTWLEAARD-PALFESFDLEPF 1042
            + A AE RDWS+MTPV L   F RL LED WRG M  C+ W +AA   PALF + DLEP 
Sbjct: 11   SAAVAEERDWSEMTPVCLAEAFSRLGLEDVWRGAMACCRAWRDAAASRPALFAALDLEPA 70

Query: 1041 FGRF-SDAAAWWTPAFQRRVDSMVRLVAVVGGPTLRTVRVRHCSDRALELVAERCPNLEI 865
            F    +DAA WWTPAFQRRVD+M+R  + +    LR VRVRHCSD AL   AER P L I
Sbjct: 71   FASVGADAAEWWTPAFQRRVDAMLRSASSLAAGELREVRVRHCSDDALAFAAERSPKLSI 130

Query: 864  LSVKNSQSVTDTSMIRIAFGCHMLTELDISSCYEISYKSLELIGQNCPNLTVLKRNLLNW 685
            LS+++S SV+D SM  +A  CHMLTELDIS C+E+SYKSLE+IGQNC NL VLKRN+ NW
Sbjct: 131  LSIRSSPSVSDRSMFIVASSCHMLTELDISYCHEVSYKSLEMIGQNCRNLNVLKRNIFNW 190

Query: 684  LDPSQHAGIVPDDYINACPQDGDREASVISKFMPKLKHLELRFSKLFINGLISISEGCKD 505
            LD S+H GIVPDDY+  CPQDGDREA  ISKFM  LKHL +RFSKL + GL +IS GCK+
Sbjct: 191  LDSSEHVGIVPDDYLRDCPQDGDREAIAISKFMQNLKHLVIRFSKLSVVGLNAISGGCKE 250

Query: 504  IETLDLFGCVNLTSRALDQTSKNMKNLKVLVRPNFYIPRSVFHTERYGHWRLYDERFQTN 325
            +E LDL+GC NLT R + Q + NMKNLK L  PNFYIPRS FH  RYGHW+LYDERFQTN
Sbjct: 251  LEVLDLYGCANLTLRGIQQATSNMKNLKELENPNFYIPRSSFHMGRYGHWQLYDERFQTN 310

Query: 324  VFQI 313
            VFQI
Sbjct: 311  VFQI 314


>ref|NP_001148783.1| LOC100282400 [Zea mays] gi|195622138|gb|ACG32899.1| ubiquitin-protein
            ligase [Zea mays]
          Length = 316

 Score =  405 bits (1041), Expect = e-110
 Identities = 198/304 (65%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = -3

Query: 1212 ATAETRDWSDMTPVLLVNVFRRLSLEDRWRGVMLACKTWLEAARD-PALFESFDLEPFFG 1036
            A+ E RDWSDMTPV L   F RL+LED WRG M  C++W +AAR  P LF   DLEP F 
Sbjct: 13   ASEELRDWSDMTPVCLAEAFSRLALEDLWRGAMPCCRSWRDAARSRPGLFAVLDLEPGFA 72

Query: 1035 RFS---DAAAWWTPAFQRRVDSMVRLVAVVGGPTLRTVRVRHCSDRALELVAERCPNLEI 865
              +   +AAAWWTP+FQRRVD+MVR  A      L  + VRHCSD AL   AER P L I
Sbjct: 73   ESTPGAEAAAWWTPSFQRRVDAMVRSAATFAVGELCEIHVRHCSDDALAFAAERSPRLSI 132

Query: 864  LSVKNSQSVTDTSMIRIAFGCHMLTELDISSCYEISYKSLELIGQNCPNLTVLKRNLLNW 685
            LSVK S +VTD SM+ +   C MLTELDIS+CYEISYKSLE+IGQNC NL VLKRN+ NW
Sbjct: 133  LSVKTSPAVTDRSMLIVGACCPMLTELDISNCYEISYKSLEVIGQNCQNLRVLKRNVFNW 192

Query: 684  LDPSQHAGIVPDDYINACPQDGDREASVISKFMPKLKHLELRFSKLFINGLISISEGCKD 505
            +DPS+HAG+VP+DY+  CP+DG+REA  IS+FMPKL+HLELRFSKL    L SI EGCKD
Sbjct: 193  IDPSEHAGVVPEDYLRECPEDGNREAITISRFMPKLRHLELRFSKLTAVALGSIPEGCKD 252

Query: 504  IETLDLFGCVNLTSRALDQTSKNMKNLKVLVRPNFYIPRSVFHTERYGHWRLYDERFQTN 325
            +E LDLFGC NLTSR +DQ + ++KNL  LV+PNFYIPRS FH  RYGHW+LYDERFQTN
Sbjct: 253  LEVLDLFGCANLTSRGIDQAAASLKNLVTLVKPNFYIPRSSFHMGRYGHWQLYDERFQTN 312

Query: 324  VFQI 313
            VFQI
Sbjct: 313  VFQI 316


>gb|EAZ06304.1| hypothetical protein OsI_28538 [Oryza sativa Indica Group]
          Length = 314

 Score =  404 bits (1037), Expect = e-110
 Identities = 196/304 (64%), Positives = 227/304 (74%), Gaps = 2/304 (0%)
 Frame = -3

Query: 1218 TGATAETRDWSDMTPVLLVNVFRRLSLEDRWRGVMLACKTWLEAARD-PALFESFDLEPF 1042
            + A AE RDWS+MTPV L   F RL LED WRG M  C+ W +AA   PALF + DLEP 
Sbjct: 11   SAAVAEERDWSEMTPVCLAEAFSRLGLEDVWRGAMACCRAWRDAAASRPALFAALDLEPA 70

Query: 1041 FGRF-SDAAAWWTPAFQRRVDSMVRLVAVVGGPTLRTVRVRHCSDRALELVAERCPNLEI 865
            F    +DAA WW PAFQRRVD+M+R  + +    LR VRVRHCSD AL   AER P L I
Sbjct: 71   FASVGADAAEWWKPAFQRRVDAMLRSASSLAAGELREVRVRHCSDDALAFAAERSPKLSI 130

Query: 864  LSVKNSQSVTDTSMIRIAFGCHMLTELDISSCYEISYKSLELIGQNCPNLTVLKRNLLNW 685
            LS+++S SV+D SM  +A  CHMLTELDIS C+E+SYKSLE+IGQNC NL VLKRN+ NW
Sbjct: 131  LSIRSSPSVSDRSMFIVASSCHMLTELDISYCHEVSYKSLEMIGQNCRNLNVLKRNIFNW 190

Query: 684  LDPSQHAGIVPDDYINACPQDGDREASVISKFMPKLKHLELRFSKLFINGLISISEGCKD 505
            LD S+H GIVPDDY+  CPQDGDREA  ISKFM  LKHL +RFSKL + GL +IS GCK+
Sbjct: 191  LDSSEHVGIVPDDYLRDCPQDGDREAIAISKFMQNLKHLVIRFSKLSVVGLNAISGGCKE 250

Query: 504  IETLDLFGCVNLTSRALDQTSKNMKNLKVLVRPNFYIPRSVFHTERYGHWRLYDERFQTN 325
            +E LDL+GC NLT R + Q + NMKNLK L +PNFYIPRS FH  RYGHW+LYDERFQTN
Sbjct: 251  LEVLDLYGCANLTLRGIQQATSNMKNLKELEKPNFYIPRSSFHMGRYGHWQLYDERFQTN 310

Query: 324  VFQI 313
            VFQI
Sbjct: 311  VFQI 314


>gb|ACF84778.1| unknown [Zea mays]
          Length = 316

 Score =  401 bits (1031), Expect = e-109
 Identities = 196/304 (64%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = -3

Query: 1212 ATAETRDWSDMTPVLLVNVFRRLSLEDRWRGVMLACKTWLEAARD-PALFESFDLEPFFG 1036
            A+ E RDWSDMTPV L   F RL+LED WRG M  C++W +AAR  P LF   DLEP F 
Sbjct: 13   ASEELRDWSDMTPVCLAEAFSRLALEDLWRGAMPCCRSWRDAARSRPGLFAVLDLEPGFA 72

Query: 1035 RFS---DAAAWWTPAFQRRVDSMVRLVAVVGGPTLRTVRVRHCSDRALELVAERCPNLEI 865
              +   +AAAWWTP+FQRRVD+MVR  A      L  + VRHCSD AL   AER P L I
Sbjct: 73   ESTPGAEAAAWWTPSFQRRVDAMVRSAATFAVGELCEIHVRHCSDDALAFAAERSPRLSI 132

Query: 864  LSVKNSQSVTDTSMIRIAFGCHMLTELDISSCYEISYKSLELIGQNCPNLTVLKRNLLNW 685
            LSVK S +VTD SM+ +   C MLTELDIS+CYEISYKSLE+IGQ+C NL VLKRN+ NW
Sbjct: 133  LSVKTSPAVTDRSMLIVGACCPMLTELDISNCYEISYKSLEVIGQSCQNLRVLKRNVFNW 192

Query: 684  LDPSQHAGIVPDDYINACPQDGDREASVISKFMPKLKHLELRFSKLFINGLISISEGCKD 505
            +DPS+HAG+VP+DY+  CP+DG+REA  IS+FMPKL+HLELRFSKL    L SI EGCKD
Sbjct: 193  IDPSEHAGVVPEDYLRECPEDGNREAITISRFMPKLRHLELRFSKLTAVALGSIPEGCKD 252

Query: 504  IETLDLFGCVNLTSRALDQTSKNMKNLKVLVRPNFYIPRSVFHTERYGHWRLYDERFQTN 325
            +E LDLFGC NLTSR +DQ + ++K+L  LV+PNFYIPRS FH  RYGHW+LYDERFQTN
Sbjct: 253  LEVLDLFGCANLTSRGIDQAAASLKSLVTLVKPNFYIPRSSFHMGRYGHWQLYDERFQTN 312

Query: 324  VFQI 313
            VFQI
Sbjct: 313  VFQI 316


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