BLASTX nr result

ID: Dioscorea21_contig00015854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015854
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like...   194   3e-47
ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group] g...   189   1e-45
dbj|BAJ92353.1| predicted protein [Hordeum vulgare subsp. vulgare]    187   4e-45
ref|XP_003564036.1| PREDICTED: RING-H2 finger protein ATL46-like...   187   5e-45
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   187   6e-45

>ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
           gi|449492685|ref|XP_004159071.1| PREDICTED: RING-H2
           finger protein ATL46-like [Cucumis sativus]
          Length = 375

 Score =  194 bits (494), Expect = 3e-47
 Identities = 115/254 (45%), Positives = 139/254 (54%), Gaps = 16/254 (6%)
 Frame = -2

Query: 924 KISPXXXXXXXXXXXXXXISGLLHLLVRFLMKKNPSGRSNNGGYXXXXXXPDTASDAXXX 745
           +ISP              ISGLLHLLVRFL+K   S  S+            + SDA   
Sbjct: 51  RISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPEL----SPSDALQR 106

Query: 744 XXXXXXXXHDSGLDQAFIDALPVFLYREVVGPKEPFDCAVCLCEFAGDDHLRLLPLCGHA 565
                   HDSGLDQAFIDALPVF Y+E+VG KEPFDCAVCLCEF+  D LRLLP+C HA
Sbjct: 107 QLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSDKDQLRLLPMCSHA 166

Query: 564 FHLNCIDTWLLSNSTCPLCRGALFVQGLAFENPVFDF----------------XXXXXXX 433
           FH+NCIDTWLLSNSTCPLCRG LF  G + ENP++DF                       
Sbjct: 167 FHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNADHRLPNCQKT 226

Query: 432 XXXXXXXESTRVFPVRLGKFRRLSNAGEVAIDVISTEVDEHAHANVRRREVGESSSEQNI 253
                      VFPVRLGKFRR+      A +V+ TEV E + +N+  R      S Q +
Sbjct: 227 MEIQEVVNEKGVFPVRLGKFRRMD-----AAEVVETEVGETSSSNLDARRCYSMGSYQYV 281

Query: 252 VVEDLSSSAMAEER 211
           V++     A+++ R
Sbjct: 282 VIDADLRIALSKAR 295


>ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group]
           gi|51535192|dbj|BAD38165.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|113595271|dbj|BAF19145.1| Os06g0233200 [Oryza sativa
           Japonica Group] gi|125554660|gb|EAZ00266.1| hypothetical
           protein OsI_22277 [Oryza sativa Indica Group]
           gi|215766038|dbj|BAG98266.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222635260|gb|EEE65392.1| hypothetical protein
           OsJ_20714 [Oryza sativa Japonica Group]
          Length = 436

 Score =  189 bits (480), Expect = 1e-45
 Identities = 122/252 (48%), Positives = 130/252 (51%), Gaps = 32/252 (12%)
 Frame = -2

Query: 924 KISPXXXXXXXXXXXXXXISGLLHLLVRFLMKKNPSGRSNNGGYXXXXXXPDTASD---- 757
           KISP              ISGLLHLLVR LMKK    R   GG          A D    
Sbjct: 81  KISPAVLFIIVILAVVFFISGLLHLLVRLLMKKQH--RRGGGGGAAAGVSRSAAGDDAGG 138

Query: 756 ----AXXXXXXXXXXXHDSGLDQAFIDALPVFLYREVV------GPKEPFDCAVCLCEFA 607
               A           HDSGLDQAFIDALPVF YRE+V      G KEPFDCAVCLCEF 
Sbjct: 139 GGDAALQRQLQQLFHLHDSGLDQAFIDALPVFAYREIVVGGGGDGDKEPFDCAVCLCEFD 198

Query: 606 GDDHLRLLPLCGHAFHLNCIDTWLLSNSTCPLCRGALFVQGLAFENPVFDF--------- 454
            +D LRLLPLCGHAFHL+CIDTWLLSNSTCPLCRG LFV GL   NP+FDF         
Sbjct: 199 AEDRLRLLPLCGHAFHLHCIDTWLLSNSTCPLCRGVLFVPGLTENNPMFDFDEGLEEGRL 258

Query: 453 ---------XXXXXXXXXXXXXXESTRVFPVRLGKFRRLSNAGEVAIDVISTEVDEHAHA 301
                                     RVFPVRLGKF+ +   G V    I      +A+ 
Sbjct: 259 SEDCDNGFGYPGHKATEGMQTPGTEKRVFPVRLGKFKNVGTQGAVEGGGIG-----NANG 313

Query: 300 NVRRREVGESSS 265
            V RRE GESSS
Sbjct: 314 AVLRREEGESSS 325


>dbj|BAJ92353.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 422

 Score =  187 bits (476), Expect = 4e-45
 Identities = 121/244 (49%), Positives = 128/244 (52%), Gaps = 24/244 (9%)
 Frame = -2

Query: 924 KISPXXXXXXXXXXXXXXISGLLHLLVRFLMKKNPSGRSNNGGYXXXXXXPDTASDAXXX 745
           KISP              ISGLLHLLVR LMKK    R   G        P  A  A   
Sbjct: 80  KISPAVLFIIVILAVVFFISGLLHLLVRLLMKKQH--RRRGGSAAAAAQGPGEADAALQR 137

Query: 744 XXXXXXXXHDSGLDQAFIDALPVFLYREVV-----GPKEPFDCAVCLCEFAGDDHLRLLP 580
                   HDSGLDQAFIDALPVF YRE+V     G KEPFDCAVCLCEF  +D LRLLP
Sbjct: 138 QLQQLFHLHDSGLDQAFIDALPVFSYREIVVGGGGGDKEPFDCAVCLCEFDAEDRLRLLP 197

Query: 579 LCGHAFHLNCIDTWLLSNSTCPLCRGALFVQGLAFE-NPVFDF----------------- 454
           LCGHAFHLNCIDTWLLSNSTCPLCRG LF  GL  E NP+FDF                 
Sbjct: 198 LCGHAFHLNCIDTWLLSNSTCPLCRGVLFAPGLTAENNPMFDFDEGLEEGRLSECCEDGF 257

Query: 453 -XXXXXXXXXXXXXXESTRVFPVRLGKFRRLSNAGEVAIDVISTEVDEHAHANVRRREVG 277
                             RVFPVRLGKF+ +   G V           +A + V RRE G
Sbjct: 258 GLPTQKSSEGLQEPAAEKRVFPVRLGKFKNVGTQGAVE--------GGNADSAVLRREEG 309

Query: 276 ESSS 265
           ESSS
Sbjct: 310 ESSS 313


>ref|XP_003564036.1| PREDICTED: RING-H2 finger protein ATL46-like [Brachypodium
           distachyon]
          Length = 400

 Score =  187 bits (475), Expect = 5e-45
 Identities = 121/244 (49%), Positives = 129/244 (52%), Gaps = 24/244 (9%)
 Frame = -2

Query: 924 KISPXXXXXXXXXXXXXXISGLLHLLVRFLMKKNPSGRSNNGGYXXXXXXPDTASDAXXX 745
           KISP              ISGLLHLLVR LMKK    R   GG       P  A  A   
Sbjct: 57  KISPAVLFIIVILAVVFFISGLLHLLVRLLMKKQHRRR---GGSASAVQGPGEADAALQR 113

Query: 744 XXXXXXXXHDSGLDQAFIDALPVFLYREVV-----GPKEPFDCAVCLCEFAGDDHLRLLP 580
                   HDSGLDQAFIDALPVF YRE+V     G KEPFDCAVCLCEF  +D LRLLP
Sbjct: 114 QLQQLFHLHDSGLDQAFIDALPVFSYREIVVGGGGGDKEPFDCAVCLCEFDAEDRLRLLP 173

Query: 579 LCGHAFHLNCIDTWLLSNSTCPLCRGALFVQGLAFE-NPVFDF----------------- 454
           LCGHAFHLNCIDTWLLSNSTCPLCR  LF  GL  E NP+FDF                 
Sbjct: 174 LCGHAFHLNCIDTWLLSNSTCPLCRAVLFAPGLTAENNPMFDFDEGLEEGRLSEYGEDGF 233

Query: 453 -XXXXXXXXXXXXXXESTRVFPVRLGKFRRLSNAGEVAIDVISTEVDEHAHANVRRREVG 277
                             RVFPVRLGKF+ +   G V           +A++ V RRE G
Sbjct: 234 GLSGHKASEGVQTPVAEKRVFPVRLGKFKNVGTQGAVE--------GGNANSAVLRREEG 285

Query: 276 ESSS 265
           ESSS
Sbjct: 286 ESSS 289


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  187 bits (474), Expect = 6e-45
 Identities = 113/256 (44%), Positives = 139/256 (54%), Gaps = 17/256 (6%)
 Frame = -2

Query: 924 KISPXXXXXXXXXXXXXXISGLLHLLVRFLMKKNPSGRSNNGGYXXXXXXPDTASDAXXX 745
           +ISP              ISGLLHLLVRFL++   S  S+            + SDA   
Sbjct: 76  RISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEI----SESDALQR 131

Query: 744 XXXXXXXXHDSGLDQAFIDALPVFLYREVVGPKEPFDCAVCLCEFAGDDHLRLLPLCGHA 565
                   HDSGLDQAFIDALPVFLY+E+VG KEPFDCAVCLCEF+  D LRLLP+C HA
Sbjct: 132 QLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHA 191

Query: 564 FHLNCIDTWLLSNSTCPLCRGALFVQGLAFENPVFDF----------------XXXXXXX 433
           FH+NCIDTWLLSNSTCPLCRG LF  G + ENP+FDF                       
Sbjct: 192 FHINCIDTWLLSNSTCPLCRGTLFAPGFSMENPIFDFDDLREEDGFPGHGENGFASGPKT 251

Query: 432 XXXXXXXESTRVFPVRLGKFRRLSN-AGEVAIDVISTEVDEHAHANVRRREVGESSSEQN 256
                      VFPVRLGKFR++++ +GE       T   E + +N+  R      S Q 
Sbjct: 252 VEIEEVVGEKGVFPVRLGKFRKVADGSGE-------TAGGETSSSNLDARRCYSMGSFQY 304

Query: 255 IVVEDLSSSAMAEERR 208
           +V + +   A+  E++
Sbjct: 305 VVGDSILRVALNHEQQ 320


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