BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015827
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-53
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   213   2e-53
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   192   4e-47
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             190   1e-46

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  213 bits (541), Expect = 2e-53
 Identities = 111/179 (62%), Positives = 133/179 (74%)
 Frame = +2

Query: 2   EAARVKQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTL 181
           E  ++KQIHA MLR  LF D  SA+RL+TA +LSP P+L YA++VFDQIP PNLY+WNTL
Sbjct: 47  ETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTL 106

Query: 182 IRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSP 361
           IRAYASSS+P  +LL+  +ML+ S   PDKFTFPF IKAA+ L  L  G A H M +K  
Sbjct: 107 IRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL 166

Query: 362 FHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
             SDVFILNSLIHFYA CGEL L Y+VF   P++DVVSWNS+I AF +    +EALELF
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELF 225



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 48/174 (27%), Positives = 81/174 (46%)
 Frame = +2

Query: 17  KQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTLIRAYA 196
           K  H  ++++ L SD      L+  Y+      L Y  RVF  IP+ ++ SWN++I A+ 
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY--RVFVNIPRRDVVSWNSMITAFV 213

Query: 197 SSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHSDV 376
               P  AL L  +M   +  T          K  +   A ++         K P   D+
Sbjct: 214 QGGCPEEALELFQEMETQNSLTLSNAMLDMYTKCGSVEDAKRLFD-------KMP-EKDI 265

Query: 377 FILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
               +++  YA  GE + A  +F+  P +D+ +WN++I+A+ +  +  EALELF
Sbjct: 266 VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 319



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/139 (29%), Positives = 61/139 (43%)
 Frame = +2

Query: 125 ARRVFDQIPQPNLYSWNTLIRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAA 304
           A+ +FD +P  ++ +WN LI AY     P  AL L  ++       PD+ T         
Sbjct: 284 AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVT--------- 334

Query: 305 GLSALKVGSALHAMAVKSPFHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNS 484
               LK G  L+             +  SLI  Y  CG+L+ A  VF    +KDV  W++
Sbjct: 335 ----LKQGMKLNC-----------HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSA 379

Query: 485 IIAAFSRAARCDEALELFS 541
           +IA  +      +A+ LFS
Sbjct: 380 MIAGLAMHGHGKDAIALFS 398


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  213 bits (541), Expect = 2e-53
 Identities = 111/179 (62%), Positives = 133/179 (74%)
 Frame = +2

Query: 2   EAARVKQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTL 181
           E  ++KQIHA MLR  LF D  SA+RL+TA +LSP P+L YA++VFDQIP PNLY+WNTL
Sbjct: 47  ETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTL 106

Query: 182 IRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSP 361
           IRAYASSS+P  +LL+  +ML+ S   PDKFTFPF IKAA+ L  L  G A H M +K  
Sbjct: 107 IRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL 166

Query: 362 FHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
             SDVFILNSLIHFYA CGEL L Y+VF   P++DVVSWNS+I AF +    +EALELF
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELF 225



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/139 (31%), Positives = 68/139 (48%)
 Frame = +2

Query: 125 ARRVFDQIPQPNLYSWNTLIRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAA 304
           A+ +FD +P  ++ +WN LI AY     P  AL L  ++       PD+ T    + A A
Sbjct: 322 AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACA 381

Query: 305 GLSALKVGSALHAMAVKSPFHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNS 484
            L A+ +G  +H    K     +  +  SLI  Y  CG+L+ A  VF    +KDV  W++
Sbjct: 382 QLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSA 441

Query: 485 IIAAFSRAARCDEALELFS 541
           +IA  +      +A+ LFS
Sbjct: 442 MIAGLAMHGHGKDAIALFS 460



 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 48/174 (27%), Positives = 86/174 (49%)
 Frame = +2

Query: 17  KQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTLIRAYA 196
           K  H  ++++ L SD      L+  Y+      L Y  RVF  IP+ ++ SWN++I A+ 
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY--RVFVNIPRRDVVSWNSMITAFV 213

Query: 197 SSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHSDV 376
               P  AL L  +M       P+  T    + A A  S  + G  +H+   ++     +
Sbjct: 214 QGGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL 272

Query: 377 FILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
            + N+++  Y  CG +E A ++F+K P+KD+VSW +++  +++    D A  +F
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIF 326


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  213 bits (541), Expect = 2e-53
 Identities = 111/179 (62%), Positives = 133/179 (74%)
 Frame = +2

Query: 2   EAARVKQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTL 181
           E  ++KQIHA MLR  LF D  SA+RL+TA +LSP P+L YA++VFDQIP PNLY+WNTL
Sbjct: 47  ETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTL 106

Query: 182 IRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSP 361
           IRAYASSS+P  +LL+  +ML+ S   PDKFTFPF IKAA+ L  L  G A H M +K  
Sbjct: 107 IRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL 166

Query: 362 FHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
             SDVFILNSLIHFYA CGEL L Y+VF   P++DVVSWNS+I AF +    +EALELF
Sbjct: 167 LGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELF 225



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/170 (27%), Positives = 83/170 (48%)
 Frame = +2

Query: 17  KQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTLIRAYA 196
           K  H  ++++ L SD      L+  Y+      L Y  RVF   P+ ++ SWN++I A+ 
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY--RVFVNXPRRDVVSWNSMITAFV 213

Query: 197 SSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHSDV 376
               P  AL L  +M       P+  T    + A A  S  + G  +H+   ++     +
Sbjct: 214 QGGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESL 272

Query: 377 FILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEA 526
            + N+++  Y  CG +E A ++F+K P+KD+VSW +++  +++    D A
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAA 322


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  192 bits (487), Expect = 4e-47
 Identities = 96/176 (54%), Positives = 130/176 (73%)
 Frame = +2

Query: 11  RVKQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTLIRA 190
           ++K++HA MLR  LF D  SA++L TA +LS    L YAR +FDQIPQPNLY+WNTLIRA
Sbjct: 40  QLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRA 99

Query: 191 YASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHS 370
           YASSSDP  + ++   +L+     P+KFTFPF IKAA+ L A +VG+A+H MA+K  F  
Sbjct: 100 YASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGM 159

Query: 371 DVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
           D++ILNSL+ FY ACG+L +A ++F+    KDVVSWNS+I+AF++    ++ALELF
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELF 215



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/138 (31%), Positives = 71/138 (51%)
 Frame = +2

Query: 125 ARRVFDQIPQPNLYSWNTLIRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAA 304
           AR VF+ +P   + +WN LI AY  +  P  AL + +++       PD+ T    + A A
Sbjct: 312 ARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACA 371

Query: 305 GLSALKVGSALHAMAVKSPFHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNS 484
            L A+ +G  +H    +     +  +++SL+  YA CG LE A +VF    ++DV  W++
Sbjct: 372 QLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSA 431

Query: 485 IIAAFSRAARCDEALELF 538
           +IA      R   A++LF
Sbjct: 432 MIAGLGMHGRGKAAIDLF 449



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   EAARV-KQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNT 178
           +A+RV   +H   ++LS   D +    L+  Y      +L  A R+F  I   ++ SWN+
Sbjct: 140 KASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACG--DLSMAERLFKGISCKDVVSWNS 197

Query: 179 LIRAYASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKS 358
           +I A+A  + P  AL L  +M   +   P+  T    + A A    L+ G  + +   + 
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVM-PNSVTMVGVLSACAKKLDLEFGRWVCSYIERK 256

Query: 359 PFHSDVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
               D+ + N+++  Y  CG ++ A ++F++ P++DV SW  ++  +++    D A  +F
Sbjct: 257 GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVF 316

Query: 539 S 541
           +
Sbjct: 317 N 317


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  190 bits (482), Expect = 1e-46
 Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +2

Query: 11  RVKQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPNLYSWNTLIRA 190
           ++KQIHA MLR +   D ++A+ L TA + S    L YAR+VFDQIPQPNLYSWN LIRA
Sbjct: 154 QLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRA 213

Query: 191 YASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHS 370
            A+SSDP+ ++L+  +ML+ S F P+KFTFP  IKA A      VG A+H MA+K+ F  
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273

Query: 371 DVFILNSLIHFYAACGELELAYQVFE--KTPQKDVVSWNSIIAAFSRAARCDEALELF 538
           DVF+LNSLIHFYA+CG L+LAY VFE  +   KD+VSWNS++  F +    D+AL+LF
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLF 331



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
 Frame = +2

Query: 59  DFHSATRLLTAYS-LSPHPNLVYARRVFDQIPQPNLYSWNTLIRAYASSSDPLVALLLLS 235
           D  S T ++  Y+ +S H     AR +FD +P+ ++ +WN LI  Y  S  P  AL +  
Sbjct: 408 DVVSWTTIIDGYAKMSEHG---IARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFR 464

Query: 236 QM-LNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHSDVFILNSLIHFYAA 412
           ++ L  S   PD+ T    + A A L A+ +G  +H    K     +  +  SLI  Y+ 
Sbjct: 465 ELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSK 524

Query: 413 CGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
            G++E A +VF     KDV  W+++IA  +   R + A+ELF
Sbjct: 525 SGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
 Frame = +2

Query: 17  KQIHATMLRLSLFSDFHSATRLLTAYSLSPHPNLVYARRVFDQIPQPN--LYSWNTLIRA 190
           K +H   ++ S   D      L+  Y+   H +L Y   VF+ I   N  + SWN+++  
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYL--VFEMIEGNNKDIVSWNSMVTG 317

Query: 191 YASSSDPLVALLLLSQMLNCSCFTPDKFTFPFAIKAAAGLSALKVGSALHAMAVKSPFHS 370
           +     P  AL L  +M N     P+  T    + A A    L +G  +     ++    
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVH-PNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMM 376

Query: 371 DVFILNSLIHFYAACGELELAYQVFEKTPQKDVVSWNSIIAAFSRAARCDEALELF 538
           ++ + N+ I  +  CGE+E+A  +F+   ++DVVSW +II  +++ +    A ++F
Sbjct: 377 NLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIF 432