BLASTX nr result
ID: Dioscorea21_contig00015741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015741
(552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l... 174 8e-45
emb|CBI20540.3| unnamed protein product [Vitis vinifera] 174 8e-45
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici... 172 2e-44
ref|XP_004157748.1| PREDICTED: peroxisome biogenesis protein 1-l... 169 1e-43
ref|XP_004150634.1| PREDICTED: peroxisome biogenesis protein 1-l... 169 1e-43
>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
Length = 1134
Score = 174 bits (441), Expect(2) = 8e-45
Identities = 89/147 (60%), Positives = 114/147 (77%)
Frame = +2
Query: 29 LTVSSLTWMEAAISDVINRLFVLLSPSSRKYQSTFGLPIPGHVLICGPSGSGKTSLATAV 208
LT SSL+W+ A SD+INRL LLSP+S + ST+ LP+PGHVLI GP GSGKT LA V
Sbjct: 552 LTASSLSWIGTAASDIINRLTTLLSPASGMWFSTYNLPLPGHVLIYGPPGSGKTLLARTV 611
Query: 209 AKYFEEHDAILAHIVFVSCSKLALERSQTIQQAITHSVSEALVHAPSVLIFDDLDRIISL 388
AK EE + +L HIVFVSCS+LALE++ TI+QA++ +S+AL H PS++IFDDLD IIS
Sbjct: 612 AKALEEQEDLLTHIVFVSCSQLALEKAVTIRQALSSYLSDALDHVPSLVIFDDLDLIISS 671
Query: 389 SSEAEGAQLNSSVTTLMKLFTDIMDEY 469
SS+ EG+Q ++SVT L + TDI+DEY
Sbjct: 672 SSDLEGSQPSTSVTALTEYLTDILDEY 698
Score = 31.6 bits (70), Expect(2) = 8e-45
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 489 EKTLSSCAYGPIAFIASVQSL 551
EK +SC GP+AFIAS QSL
Sbjct: 700 EKRKNSCGIGPLAFIASAQSL 720
>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
Length = 1114
Score = 174 bits (441), Expect(2) = 8e-45
Identities = 89/147 (60%), Positives = 114/147 (77%)
Frame = +2
Query: 29 LTVSSLTWMEAAISDVINRLFVLLSPSSRKYQSTFGLPIPGHVLICGPSGSGKTSLATAV 208
LT SSL+W+ A SD+INRL LLSP+S + ST+ LP+PGHVLI GP GSGKT LA V
Sbjct: 532 LTASSLSWIGTAASDIINRLTTLLSPASGMWFSTYNLPLPGHVLIYGPPGSGKTLLARTV 591
Query: 209 AKYFEEHDAILAHIVFVSCSKLALERSQTIQQAITHSVSEALVHAPSVLIFDDLDRIISL 388
AK EE + +L HIVFVSCS+LALE++ TI+QA++ +S+AL H PS++IFDDLD IIS
Sbjct: 592 AKALEEQEDLLTHIVFVSCSQLALEKAVTIRQALSSYLSDALDHVPSLVIFDDLDLIISS 651
Query: 389 SSEAEGAQLNSSVTTLMKLFTDIMDEY 469
SS+ EG+Q ++SVT L + TDI+DEY
Sbjct: 652 SSDLEGSQPSTSVTALTEYLTDILDEY 678
Score = 31.6 bits (70), Expect(2) = 8e-45
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 489 EKTLSSCAYGPIAFIASVQSL 551
EK +SC GP+AFIAS QSL
Sbjct: 680 EKRKNSCGIGPLAFIASAQSL 700
>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
gi|223543202|gb|EEF44734.1| peroxisome biogenesis factor,
putative [Ricinus communis]
Length = 1137
Score = 172 bits (436), Expect(2) = 2e-44
Identities = 92/157 (58%), Positives = 112/157 (71%), Gaps = 1/157 (0%)
Frame = +2
Query: 2 ESSIHRDHMLTVSSLTWMEAAISDVINRLFVLLSPSSRKYQSTFGLPIPGHVLICGPSGS 181
E + H+ +SSL+WM +DVINR LLSP+S ST+ LP PGHVLI GP GS
Sbjct: 545 ERNSHKGISANLSSLSWMGTTAADVINRTMALLSPTSGMLFSTYNLPFPGHVLIYGPHGS 604
Query: 182 GKTSLATAVAKYFEEHDAILAHIVFVSCSKLALERSQTIQQAITHSVSEALVHAPSVLIF 361
GKT LA AVAK EEH+ +LAHIVFV CS LALE++ I+QA++ +SEAL HAPS++IF
Sbjct: 605 GKTILARAVAKSLEEHEDLLAHIVFVGCSALALEKASIIRQALSAYISEALDHAPSLIIF 664
Query: 362 DDLDRIISLSSEAEG-AQLNSSVTTLMKLFTDIMDEY 469
DDLD IIS SS+ EG Q ++SV L K TDIMDEY
Sbjct: 665 DDLDTIISSSSDGEGPPQPSTSVVALTKFLTDIMDEY 701
Score = 32.0 bits (71), Expect(2) = 2e-44
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 489 EKTLSSCAYGPIAFIASVQSL 551
EK SSC GPIAFIASV +L
Sbjct: 703 EKRKSSCGIGPIAFIASVHTL 723
>ref|XP_004157748.1| PREDICTED: peroxisome biogenesis protein 1-like [Cucumis sativus]
Length = 1123
Score = 169 bits (427), Expect(2) = 1e-43
Identities = 79/147 (53%), Positives = 116/147 (78%)
Frame = +2
Query: 29 LTVSSLTWMEAAISDVINRLFVLLSPSSRKYQSTFGLPIPGHVLICGPSGSGKTSLATAV 208
L VSSL+W++ ++ +VINR+ VLLSP + + T +P+PGH+LICGP GSGKT LA A
Sbjct: 540 LDVSSLSWLDESLPNVINRIKVLLSPRAGVWFGTHNIPLPGHILICGPPGSGKTLLARAA 599
Query: 209 AKYFEEHDAILAHIVFVSCSKLALERSQTIQQAITHSVSEALVHAPSVLIFDDLDRIISL 388
AK+ +E+D +LAH+VFV CS+LA E+ QTI+Q++ + VSEAL HAPS+++FDDLD II
Sbjct: 600 AKFLQEYDDLLAHVVFVCCSQLASEKVQTIRQSLLNYVSEALEHAPSLIVFDDLDSIILS 659
Query: 389 SSEAEGAQLNSSVTTLMKLFTDIMDEY 469
+SE+EG+QL++S++ + + D++DEY
Sbjct: 660 TSESEGSQLSASMSAITEFLIDMIDEY 686
Score = 33.1 bits (74), Expect(2) = 1e-43
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 489 EKTLSSCAYGPIAFIASVQSL 551
EK SSC GPIAF+ASVQ+L
Sbjct: 688 EKRKSSCQVGPIAFVASVQTL 708
>ref|XP_004150634.1| PREDICTED: peroxisome biogenesis protein 1-like [Cucumis sativus]
Length = 935
Score = 169 bits (427), Expect(2) = 1e-43
Identities = 79/147 (53%), Positives = 116/147 (78%)
Frame = +2
Query: 29 LTVSSLTWMEAAISDVINRLFVLLSPSSRKYQSTFGLPIPGHVLICGPSGSGKTSLATAV 208
L VSSL+W++ ++ +VINR+ VLLSP + + T +P+PGH+LICGP GSGKT LA A
Sbjct: 540 LDVSSLSWLDESLPNVINRIKVLLSPRAGVWFGTHNIPLPGHILICGPPGSGKTLLARAA 599
Query: 209 AKYFEEHDAILAHIVFVSCSKLALERSQTIQQAITHSVSEALVHAPSVLIFDDLDRIISL 388
AK+ +E+D +LAH+VFV CS+LA E+ QTI+Q++ + VSEAL HAPS+++FDDLD II
Sbjct: 600 AKFLQEYDDLLAHVVFVCCSQLASEKVQTIRQSLLNYVSEALEHAPSLIVFDDLDSIILS 659
Query: 389 SSEAEGAQLNSSVTTLMKLFTDIMDEY 469
+SE+EG+QL++S++ + + D++DEY
Sbjct: 660 TSESEGSQLSASMSAITEFLIDMIDEY 686
Score = 33.1 bits (74), Expect(2) = 1e-43
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 489 EKTLSSCAYGPIAFIASVQSL 551
EK SSC GPIAF+ASVQ+L
Sbjct: 688 EKRKSSCQVGPIAFVASVQTL 708