BLASTX nr result
ID: Dioscorea21_contig00015707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015707
(1103 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|2... 106 7e-30
ref|XP_002308216.1| predicted protein [Populus trichocarpa] gi|2... 108 1e-29
ref|XP_002528119.1| catalytic, putative [Ricinus communis] gi|22... 105 1e-27
emb|CBI30404.3| unnamed protein product [Vitis vinifera] 107 2e-25
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 100 3e-25
>ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|222867604|gb|EEF04735.1|
predicted protein [Populus trichocarpa]
Length = 295
Score = 106 bits (265), Expect(3) = 7e-30
Identities = 43/69 (62%), Positives = 58/69 (84%)
Frame = +1
Query: 568 RFLMVGNEAMLGLWEPKKAVPMEWSDGHIWTVELDIPVGTSIQFKFILRGVSGEISWQPG 747
+F +VG++ +LGLW+P+ +P+ WSDGH+WTVE+DIPVG SIQFKFIL+G++ +I WQPG
Sbjct: 113 QFTIVGDDPLLGLWDPESGIPLNWSDGHLWTVEMDIPVGKSIQFKFILKGIAEKIFWQPG 172
Query: 748 PDRCLQTRE 774
PDR L T E
Sbjct: 173 PDRILPTWE 181
Score = 39.7 bits (91), Expect(3) = 7e-30
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 851 TMVVWEDWEDAHKQKILEEEAAAS 922
T+VVWEDWEDA QKI EEE +A+
Sbjct: 185 TIVVWEDWEDAALQKITEEEPSAN 208
Score = 32.0 bits (71), Expect(3) = 7e-30
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 413 LDVGTYEPKTVHVKFVLHKECLFG 484
L + + KTVHVKF L KEC FG
Sbjct: 88 LSLSADDSKTVHVKFQLRKECSFG 111
>ref|XP_002308216.1| predicted protein [Populus trichocarpa] gi|222854192|gb|EEE91739.1|
predicted protein [Populus trichocarpa]
Length = 421
Score = 108 bits (269), Expect(3) = 1e-29
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 568 RFLMVGNEAMLGLWEPKKAVPMEWSDGHIWTVELDIPVGTSIQFKFILRGVSGEISWQPG 747
+F +VG++ +LGLW+P +P+ WSD H+WTVELD+PVG S QFKFIL+G+ G I WQPG
Sbjct: 45 QFTIVGDDPLLGLWDPGSVIPLNWSDEHLWTVELDLPVGKSFQFKFILKGIGGGICWQPG 104
Query: 748 PDRCLQTRE 774
PDR LQTRE
Sbjct: 105 PDRVLQTRE 113
Score = 39.3 bits (90), Expect(3) = 1e-29
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2
Query: 851 TMVVWEDWEDAHKQKILEEEAAAS 922
T+VVWEDWEDA QK+ EEE +A+
Sbjct: 117 TIVVWEDWEDAALQKVTEEEPSAN 140
Score = 30.0 bits (66), Expect(3) = 1e-29
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 413 LDVGTYEPKTVHVKFVLHKECLFG 484
L + E KTV VKF L KEC FG
Sbjct: 20 LSLSADESKTVRVKFQLQKECSFG 43
>ref|XP_002528119.1| catalytic, putative [Ricinus communis] gi|223532508|gb|EEF34298.1|
catalytic, putative [Ricinus communis]
Length = 323
Score = 105 bits (262), Expect(3) = 1e-27
Identities = 40/69 (57%), Positives = 60/69 (86%)
Frame = +1
Query: 568 RFLMVGNEAMLGLWEPKKAVPMEWSDGHIWTVELDIPVGTSIQFKFILRGVSGEISWQPG 747
+F++VG++ + G+W+P+ A+P+ WSDGH+W +ELDIP+G +IQFKFIL+ ++G+ISWQPG
Sbjct: 35 QFVVVGDDPIFGMWDPENAIPLNWSDGHVWILELDIPIGQTIQFKFILKEITGKISWQPG 94
Query: 748 PDRCLQTRE 774
PDR L+T E
Sbjct: 95 PDRVLKTWE 103
Score = 35.8 bits (81), Expect(3) = 1e-27
Identities = 17/58 (29%), Positives = 36/58 (62%)
Frame = +2
Query: 851 TMVVWEDWEDAHKQKILEEEAAASFICKDSDISSNRSVVAIADVINDALDSIKITSDD 1024
T+VV EDWEDA QK+LEEE + ++ + + N ++ +A+ + +++ + +++
Sbjct: 107 TIVVCEDWEDATFQKLLEEEPNCN---QNEEPTDNSEMLIVAENLTIVSENLTVQNEE 161
Score = 29.3 bits (64), Expect(3) = 1e-27
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 431 EPKTVHVKFVLHKECLFG 484
+ KTVHVK L+KEC FG
Sbjct: 16 QSKTVHVKIQLNKECSFG 33
>emb|CBI30404.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 107 bits (267), Expect(3) = 2e-25
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = +1
Query: 568 RFLMVGNEAMLGLWEPKKAVPMEWSDGHIWTVELDIPVGTSIQFKFILRGVSGEISWQPG 747
+FL+VG++ M GLW+P AVP+ WSDGH+WT ELDIP+G IQFKFIL+G++G I WQPG
Sbjct: 98 QFLIVGDDPMFGLWDPSSAVPLCWSDGHVWTAELDIPIGKLIQFKFILKGITGTILWQPG 157
Query: 748 PDRCLQT 768
PDR L+T
Sbjct: 158 PDRILRT 164
Score = 33.1 bits (74), Expect(3) = 2e-25
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Frame = +2
Query: 851 TMVVWEDWEDAHKQKILEEEAAASFICKDSDISSNRSVVA----------IADVINDALD 1000
T+ V EDWEDA QKI E S + ++ I+S+ + A ++D+ ++
Sbjct: 170 TITVVEDWEDAELQKITE--GPVSILNEEPVINSDTLIAAEDVTRTKYAHLSDINKESAI 227
Query: 1001 SI---------------KITSDDDDHAKLQTTFVGDPVLVPGLAPM 1093
++ K+T+ K PVLVPGL P+
Sbjct: 228 TVTTAHPSEKPPAEAQNKLTNPGSAEIKENLITYEGPVLVPGLTPL 273
Score = 22.3 bits (46), Expect(3) = 2e-25
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 440 TVHVKFVLHKECLFG 484
TVHV+ L K C +G
Sbjct: 82 TVHVRLQLQKRCSYG 96
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 100 bits (250), Expect(3) = 3e-25
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +1
Query: 568 RFLMVGNEAMLGLWEPKKAVPMEWSDGHIWTVELDIPVGTSIQFKFILRGVSGEISWQPG 747
+FL+VG++ MLGLW P A+PM WSD HIW+ ELD+P+ ++IQFKFIL+ SGEI WQPG
Sbjct: 559 QFLLVGDDPMLGLWNPADAIPMNWSDEHIWSTELDVPIESTIQFKFILKQCSGEIFWQPG 618
Query: 748 PDRCLQTRE 774
PDR ++ E
Sbjct: 619 PDRIFKSWE 627
Score = 33.1 bits (74), Expect(3) = 3e-25
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Frame = +2
Query: 851 TMVVWEDWEDAHKQKILEEEAAA----SFICKDSDISSNRSVVAIADVIND-------AL 997
T+++ EDWE++ QKI+EE+ + D++ +N+S +A++ ND A
Sbjct: 631 TIIISEDWENSEAQKIMEEKMESVINHDLTPTDAENITNQSEGLLANMNNDIMFSGNVAF 690
Query: 998 DSIKITSDDDDHAKLQTT------------FVGDPVLVPGLAPM 1093
K+ D++ + +T + VLVPG+ P+
Sbjct: 691 AEEKLIDDNELFTRGSSTLKQELPKKTLFSYEEGNVLVPGITPL 734
Score = 28.5 bits (62), Expect(3) = 3e-25
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 437 KTVHVKFVLHKECLFG 484
K +HVKF L K+C+FG
Sbjct: 542 KRIHVKFQLQKQCMFG 557