BLASTX nr result

ID: Dioscorea21_contig00015677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015677
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21810.3| unnamed protein product [Vitis vinifera]              337   1e-90
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   337   1e-90
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   334   1e-89
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   332   7e-89
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   332   7e-89

>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  337 bits (865), Expect = 1e-90
 Identities = 168/179 (93%), Positives = 174/179 (97%)
 Frame = -2

Query: 538 RCEFDVKGNGALSGDTDPHLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 359
           RCEF+VK NGALS D DP  +DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSG
Sbjct: 11  RCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSG 70

Query: 358 CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 179
           CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 71  CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 130

Query: 178 RALGVDVENLIVCQPDNGEMALEVADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 2
           +ALGVDVENLIVCQPD+GEMALE+ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ
Sbjct: 131 KALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 189


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Vitis vinifera]
          Length = 415

 Score =  337 bits (865), Expect = 1e-90
 Identities = 168/179 (93%), Positives = 174/179 (97%)
 Frame = -2

Query: 538 RCEFDVKGNGALSGDTDPHLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 359
           RCEF+VK NGALS D DP  +DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSG
Sbjct: 42  RCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSG 101

Query: 358 CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 179
           CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 102 CLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 161

Query: 178 RALGVDVENLIVCQPDNGEMALEVADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 2
           +ALGVDVENLIVCQPD+GEMALE+ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ
Sbjct: 162 KALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 220


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  334 bits (856), Expect = 1e-89
 Identities = 165/183 (90%), Positives = 174/183 (95%), Gaps = 1/183 (0%)
 Frame = -2

Query: 547 RNPRCEFDVK-GNGALSGDTDPHLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVET 371
           R  RCEF    GNGALSG+ DP LIDRQKAL+AAMNDINNSFGKGSVTRLGSAGGA VET
Sbjct: 37  RRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVET 96

Query: 370 FPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFD 191
           FPSGCLTLDFALGGGLPKGR+VE+YGPESSGKTTLALHAIAE+QKLGGNAMLVDAEHAFD
Sbjct: 97  FPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFD 156

Query: 190 PAYSRALGVDVENLIVCQPDNGEMALEVADRMCRSGAIDLICVDSVSALTPRAEIEGEIG 11
           PAYS+ALGVD+ENLIVCQPDNGEMALE+ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIG
Sbjct: 157 PAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIG 216

Query: 10  MQQ 2
           MQQ
Sbjct: 217 MQQ 219


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Glycine max]
          Length = 414

 Score =  332 bits (850), Expect = 7e-89
 Identities = 166/184 (90%), Positives = 174/184 (94%)
 Frame = -2

Query: 553 KLRNPRCEFDVKGNGALSGDTDPHLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVE 374
           K  N +CE + + NGALSGD DP  IDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVE
Sbjct: 37  KHANIQCELEGRPNGALSGDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVE 96

Query: 373 TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 194
           TFPSGCLTLD ALGGGLPKGRI+EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 97  TFPSGCLTLDCALGGGLPKGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 156

Query: 193 DPAYSRALGVDVENLIVCQPDNGEMALEVADRMCRSGAIDLICVDSVSALTPRAEIEGEI 14
           DPAYS+ALGVDVENLIVCQPD+GEMALE+ADRMCRSGAIDLICVDSVSALTPRAEIEGEI
Sbjct: 157 DPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEI 216

Query: 13  GMQQ 2
           GMQQ
Sbjct: 217 GMQQ 220


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
           gi|241920620|gb|EER93764.1| hypothetical protein
           SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  332 bits (850), Expect = 7e-89
 Identities = 164/185 (88%), Positives = 175/185 (94%), Gaps = 1/185 (0%)
 Frame = -2

Query: 553 KLRNPRCEFDVKG-NGALSGDTDPHLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALV 377
           + R  RCEF   G NGALSG+ DP L+DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA V
Sbjct: 38  RARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFV 97

Query: 376 ETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 197
           ETFPSGCLTLDFALGGGLPKGR+VE+YGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 98  ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 157

Query: 196 FDPAYSRALGVDVENLIVCQPDNGEMALEVADRMCRSGAIDLICVDSVSALTPRAEIEGE 17
           FDPAYS+ALGVD+ENLIVCQPDNGEMALE+ADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 217

Query: 16  IGMQQ 2
           IGMQQ
Sbjct: 218 IGMQQ 222


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