BLASTX nr result

ID: Dioscorea21_contig00015676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015676
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21810.3| unnamed protein product [Vitis vinifera]              303   3e-80
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   303   3e-80
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   296   3e-78
gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indi...   296   3e-78
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   296   3e-78

>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  303 bits (776), Expect = 3e-80
 Identities = 151/200 (75%), Positives = 168/200 (84%)
 Frame = -1

Query: 758 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALK 579
           GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALK
Sbjct: 183 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 242

Query: 578 FFASVRLEIRPIGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFEIIFGEGVSTLGCI 399
           FFAS+RLEIRPIGKIKS KGDEDIG             RPYKQAEFEIIFGEGVS LGCI
Sbjct: 243 FFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCI 302

Query: 398 LDCAEMLDIVAKKGSWYSYNDHRLGQGRDKALQFLRENPLICNEVEKAVRSMMLAGVNHV 219
           LDCAE++D+V KKGSWYSY D+RLGQGRD+ALQ+LRENPL+C+E+EK VR MM  G+  +
Sbjct: 303 LDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQL 362

Query: 218 SSVTLGHSPTIEEDDQILNE 159
            +  +  SPT  ED+ IL E
Sbjct: 363 GAPHVRLSPTSPEDEDILEE 382


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Vitis vinifera]
          Length = 415

 Score =  303 bits (776), Expect = 3e-80
 Identities = 151/200 (75%), Positives = 168/200 (84%)
 Frame = -1

Query: 758 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALK 579
           GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALK
Sbjct: 214 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 273

Query: 578 FFASVRLEIRPIGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFEIIFGEGVSTLGCI 399
           FFAS+RLEIRPIGKIKS KGDEDIG             RPYKQAEFEIIFGEGVS LGCI
Sbjct: 274 FFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCI 333

Query: 398 LDCAEMLDIVAKKGSWYSYNDHRLGQGRDKALQFLRENPLICNEVEKAVRSMMLAGVNHV 219
           LDCAE++D+V KKGSWYSY D+RLGQGRD+ALQ+LRENPL+C+E+EK VR MM  G+  +
Sbjct: 334 LDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQL 393

Query: 218 SSVTLGHSPTIEEDDQILNE 159
            +  +  SPT  ED+ IL E
Sbjct: 394 GAPHVRLSPTSPEDEDILEE 413


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
           gi|241920620|gb|EER93764.1| hypothetical protein
           SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  296 bits (758), Expect = 3e-78
 Identities = 148/200 (74%), Positives = 169/200 (84%)
 Frame = -1

Query: 758 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALK 579
           GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALK
Sbjct: 216 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALK 275

Query: 578 FFASVRLEIRPIGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFEIIFGEGVSTLGCI 399
           FFASVRLEIRPIGKIKS KGDED+G             RPYKQAEFEIIFGEGVS LGC+
Sbjct: 276 FFASVRLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCV 335

Query: 398 LDCAEMLDIVAKKGSWYSYNDHRLGQGRDKALQFLRENPLICNEVEKAVRSMMLAGVNHV 219
           LDCAE++D+VAKKGSWYSY D RLGQGR+KALQ+LRE+P IC+E+EK VR+M+  G  H+
Sbjct: 336 LDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHM 395

Query: 218 SSVTLGHSPTIEEDDQILNE 159
           S +  G + +  ED+Q+ +E
Sbjct: 396 SLLAFGQTSS-TEDEQVYDE 414


>gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indica Group]
           gi|222625431|gb|EEE59563.1| hypothetical protein
           OsJ_11852 [Oryza sativa Japonica Group]
          Length = 436

 Score =  296 bits (758), Expect = 3e-78
 Identities = 146/194 (75%), Positives = 165/194 (85%)
 Frame = -1

Query: 758 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALK 579
           GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALK
Sbjct: 238 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALK 297

Query: 578 FFASVRLEIRPIGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFEIIFGEGVSTLGCI 399
           FFASVRLEIRPIGKIKS KGDED+G             RPYKQAEFEIIFGEGVS LGC+
Sbjct: 298 FFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCV 357

Query: 398 LDCAEMLDIVAKKGSWYSYNDHRLGQGRDKALQFLRENPLICNEVEKAVRSMMLAGVNHV 219
           LDCAE++++VAKKGSWYSY + RLGQGR+KALQ+LRE+P IC+E+EKAVR+M+  G  H+
Sbjct: 358 LDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHM 417

Query: 218 SSVTLGHSPTIEED 177
           S +  G S   EE+
Sbjct: 418 SLLAFGRSSLTEEE 431


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
           gi|108710024|gb|ABF97819.1| DNA repair protein recA,
           chloroplast precursor, putative, expressed [Oryza sativa
           Japonica Group] gi|113549209|dbj|BAF12652.1|
           Os03g0639700 [Oryza sativa Japonica Group]
           gi|215704578|dbj|BAG94211.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 418

 Score =  296 bits (758), Expect = 3e-78
 Identities = 146/194 (75%), Positives = 165/194 (85%)
 Frame = -1

Query: 758 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALK 579
           GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALK
Sbjct: 220 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALK 279

Query: 578 FFASVRLEIRPIGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFEIIFGEGVSTLGCI 399
           FFASVRLEIRPIGKIKS KGDED+G             RPYKQAEFEIIFGEGVS LGC+
Sbjct: 280 FFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCV 339

Query: 398 LDCAEMLDIVAKKGSWYSYNDHRLGQGRDKALQFLRENPLICNEVEKAVRSMMLAGVNHV 219
           LDCAE++++VAKKGSWYSY + RLGQGR+KALQ+LRE+P IC+E+EKAVR+M+  G  H+
Sbjct: 340 LDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHM 399

Query: 218 SSVTLGHSPTIEED 177
           S +  G S   EE+
Sbjct: 400 SLLAFGRSSLTEEE 413


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