BLASTX nr result

ID: Dioscorea21_contig00015654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015654
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACO35357.1| Acyl-CoA dehydrogenase [Elaeis oleifera]                92   3e-17
ref|XP_002868103.1| Acyl-coenzyme A oxidase [Arabidopsis lyrata ...    91   8e-17
emb|CAB10450.1| acyl-CoA oxidase like protein [Arabidopsis thali...    91   1e-16
pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1 gi|5...    91   1e-16
ref|NP_567513.4| peroxisomal acyl-coenzyme A oxidase 1 [Arabidop...    91   1e-16

>gb|ACO35357.1| Acyl-CoA dehydrogenase [Elaeis oleifera]
          Length = 212

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/58 (77%), Positives = 49/58 (84%)
 Frame = +3

Query: 87  MEGVDHLDHERRKAQFDVEAMKIVWAGSKHDLVVSDRMARLVASDPVFEKDNRQRIDR 260
           ME VDHL HER KAQFDV+AMK+VWAGSKH L VSDRMARLVASDPVF KD+R  + R
Sbjct: 1   MEEVDHLAHERSKAQFDVDAMKVVWAGSKHALDVSDRMARLVASDPVFRKDDRTMLGR 58


>ref|XP_002868103.1| Acyl-coenzyme A oxidase [Arabidopsis lyrata subsp. lyrata]
           gi|297313939|gb|EFH44362.1| Acyl-coenzyme A oxidase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 664

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = +3

Query: 87  MEGVDHLDHERRKAQFDVEAMKIVWAGSKHDLVVSDRMARLVASDPVFEKDNRQRIDR 260
           MEGVDHL  ER KA+FDVE MKIVWAGS+H   VSDR+ARLVASDPVFEK NR R+ R
Sbjct: 1   MEGVDHLADERNKAEFDVEEMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSR 58


>emb|CAB10450.1| acyl-CoA oxidase like protein [Arabidopsis thaliana]
           gi|7268426|emb|CAB78718.1| acyl-CoA oxidase like protein
           [Arabidopsis thaliana]
          Length = 895

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/61 (72%), Positives = 49/61 (80%)
 Frame = +3

Query: 78  LGAMEGVDHLDHERRKAQFDVEAMKIVWAGSKHDLVVSDRMARLVASDPVFEKDNRQRID 257
           L  MEG+DHL  ER KA+FDVE MKIVWAGS+H   VSDR+ARLVASDPVFEK NR R+ 
Sbjct: 211 LRIMEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLS 270

Query: 258 R 260
           R
Sbjct: 271 R 271


>pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1
           gi|58177067|pdb|1W07|B Chain B, Arabidopsis Thaliana
           Acyl-Coa Oxidase 1
          Length = 659

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = +3

Query: 87  MEGVDHLDHERRKAQFDVEAMKIVWAGSKHDLVVSDRMARLVASDPVFEKDNRQRIDR 260
           MEG+DHL  ER KA+FDVE MKIVWAGS+H   VSDR+ARLVASDPVFEK NR R+ R
Sbjct: 1   MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSR 58


>ref|NP_567513.4| peroxisomal acyl-coenzyme A oxidase 1 [Arabidopsis thaliana]
           gi|62286589|sp|O65202.1|ACOX1_ARATH RecName:
           Full=Peroxisomal acyl-coenzyme A oxidase 1; Short=AOX 1;
           AltName: Full=Long-chain acyl-CoA oxidase; Short=AtCX1
           gi|3044214|gb|AAC13498.1| acyl-CoA oxidase [Arabidopsis
           thaliana] gi|16604462|gb|AAL24237.1| AT4g16760/dl4405c
           [Arabidopsis thaliana] gi|24111395|gb|AAN46824.1|
           At4g16760/dl4405c [Arabidopsis thaliana]
           gi|332658398|gb|AEE83798.1| peroxisomal acyl-coenzyme A
           oxidase 1 [Arabidopsis thaliana]
          Length = 664

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = +3

Query: 87  MEGVDHLDHERRKAQFDVEAMKIVWAGSKHDLVVSDRMARLVASDPVFEKDNRQRIDR 260
           MEG+DHL  ER KA+FDVE MKIVWAGS+H   VSDR+ARLVASDPVFEK NR R+ R
Sbjct: 1   MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSR 58


Top