BLASTX nr result

ID: Dioscorea21_contig00015603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015603
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520494.1| protein with unknown function [Ricinus commu...    59   5e-07
ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [...    58   7e-07
gb|AFK33953.1| unknown [Medicago truncatula]                           58   9e-07
ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis...    56   3e-06
ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [...    56   3e-06

>ref|XP_002520494.1| protein with unknown function [Ricinus communis]
           gi|223540336|gb|EEF41907.1| protein with unknown
           function [Ricinus communis]
          Length = 216

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/51 (64%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -3

Query: 482 QTILTEIYHIISKKXXXXXXXXXXAT-PTQGTTINVTDSTGGSTKRNCCST 333
           QTILTEIYHIISKK          +T P QGTTINV D T G+TKR+CCST
Sbjct: 167 QTILTEIYHIISKKALAAQEAAGNSTLPGQGTTINVAD-TSGNTKRSCCST 216


>ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
           gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related
           protein Rab11C-like [Cucumis sativus]
          Length = 217

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -3

Query: 482 QTILTEIYHIISKKXXXXXXXXXXAT-PTQGTTINVTDSTGGSTKRNCCST 333
           QTILTEIYHIISKK           T P QGTTINV+D++G S +R CCS+
Sbjct: 167 QTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217


>gb|AFK33953.1| unknown [Medicago truncatula]
          Length = 215

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = -3

Query: 482 QTILTEIYHIISKKXXXXXXXXXXATPTQGTTINVTDSTGGSTKRNCCST 333
           QTILTEIYHI+SKK          + P QGTTINV DS+  +TKR CCST
Sbjct: 167 QTILTEIYHIVSKKALAAQEAAGTSLPGQGTTINVADSS-ANTKRGCCST 215


>ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
           gi|147777473|emb|CAN62732.1| hypothetical protein
           VITISV_031984 [Vitis vinifera]
          Length = 217

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/51 (56%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = -3

Query: 482 QTILTEIYHIISKKXXXXXXXXXXAT-PTQGTTINVTDSTGGSTKRNCCST 333
           QTILTEIYHIISKK             P QGTTINV D++G   K+ CCST
Sbjct: 167 QTILTEIYHIISKKALAAQEAAASTALPGQGTTINVNDASGNQNKKTCCST 217


>ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
          Length = 216

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/51 (60%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -3

Query: 482 QTILTEIYHIISKKXXXXXXXXXXAT-PTQGTTINVTDSTGGSTKRNCCST 333
           QTILTEIYHI+SKK           T P QGTTINV D++ G+TKR CCST
Sbjct: 167 QTILTEIYHIVSKKALAAQEAAVGTTLPGQGTTINVGDAS-GNTKRGCCST 216


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