BLASTX nr result
ID: Dioscorea21_contig00015561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015561
(2421 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2... 745 0.0
ref|XP_002455105.1| hypothetical protein SORBIDRAFT_03g004420 [S... 744 0.0
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2... 742 0.0
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 739 0.0
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 739 0.0
>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 745 bits (1924), Expect = 0.0
Identities = 398/598 (66%), Positives = 453/598 (75%), Gaps = 27/598 (4%)
Frame = -3
Query: 2395 LASMTVKSSDSPRYAPYDPSLPKPWRALVDGRNGNLYFWNPLTKVTQYERPSAS-----E 2231
+ + SS PRYAP DP+LPKPWR LVDG+ G LYFWNP T VTQYERPS S
Sbjct: 1 MTAAATTSSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSTSAIPPKS 60
Query: 2230 SENL-------VAQSCS----APSSDDPAIMNASSSGSGQT------SLPNPRVPALTA- 2105
S ++ V QS S +P NA S T ++PN ++A
Sbjct: 61 SSSVPITPSVQVEQSSSHRGYSPDDRYGRAHNAESKADAVTRSSQAWNVPNGTANGISAR 120
Query: 2104 ---GNESPAGLSAEAYRRHHEITVIGNHVPPPYTTFQSAGFPSEILRELQHAGFSAPTPI 1934
+ +GL+ EAYRR HEITV G+ VPPP T+F++ GFPSEIL+E+ AGFS+PTPI
Sbjct: 121 GHGSSSGGSGLTGEAYRRRHEITVTGDEVPPPLTSFEATGFPSEILKEVLKAGFSSPTPI 180
Query: 1933 QAQSWPIALDGRDIVAVAKTGSGKTLGYLIPGFIHLKNLGSNSQMGPLVLVLSPTRELAT 1754
QAQSWP+AL RDIVAVAKTGSGKTLGYLIPGFIHLK ++ Q+GP VLVLSPTRELAT
Sbjct: 181 QAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLGPTVLVLSPTRELAT 240
Query: 1753 QIQDEAVKFGRSSRISSVCLYGGAPKGPQLRDLSKGAHVVVATPGRLNDILEMKKVSLHQ 1574
QIQDEAVKFG+SSRIS CLYGGAPKGPQL++L +GA +VVATPGRLNDILEM++VSL+Q
Sbjct: 241 QIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRRVSLNQ 300
Query: 1573 VSYLVLDEADRMLDMGFEPQIRRIVKEIPPRRQTLMYTATWPKEVRKIAADLLVNPVQVN 1394
V YLVLDEADRMLDMGFEPQIR+IVKE+P RRQTLMYTATWPKEVRKIAADLLVNPVQVN
Sbjct: 301 VKYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVNPVQVN 360
Query: 1393 IGNIDELVANKSITQHVEMISPMEKRKRLEQILHSQEPGSKIIIFCSTKRMCDQLARNLG 1214
IGNIDELVANKSITQHVE+++P+EK +RLEQIL SQEPGSKIIIFCSTK+MCDQLARNL
Sbjct: 361 IGNIDELVANKSITQHVELLAPLEKHRRLEQILRSQEPGSKIIIFCSTKKMCDQLARNLT 420
Query: 1213 HQFGANAIHGDKSQNERDLVLNQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVE 1034
QFGA AIHGDKSQ+ERD VL+QFRTG+SPILVATDVAARGLDIKDIRVV+NYDFPTGVE
Sbjct: 421 RQFGAAAIHGDKSQSERDHVLSQFRTGRSPILVATDVAARGLDIKDIRVVVNYDFPTGVE 480
Query: 1033 DYVHRIXXXXXXXXXGVSYTFLSDQDSRYASDLVKVLEGANQCVPSELRDMAAQ-GGYGG 857
DYVHRI GV+YTF DQD++YASDL+KVLEGANQ VP E+R MA++ GG G
Sbjct: 481 DYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGANQLVPPEIRAMASRGGGVMG 540
Query: 856 RFRRWRSDSGVHDRVHSYGGTCTGSSYDKSPSFGGVCNDSSYDKGGGWGQALSSGWSD 683
RFRRW S SG D GG S + +GG + GG G SGW D
Sbjct: 541 RFRRWGSGSGGRD-----GGRGGHSDF----GYGG--------RDGGRGSWGGSGWGD 581
>ref|XP_002455105.1| hypothetical protein SORBIDRAFT_03g004420 [Sorghum bicolor]
gi|241927080|gb|EES00225.1| hypothetical protein
SORBIDRAFT_03g004420 [Sorghum bicolor]
Length = 673
Score = 744 bits (1921), Expect = 0.0
Identities = 393/604 (65%), Positives = 451/604 (74%), Gaps = 28/604 (4%)
Frame = -3
Query: 2392 ASMTVKSSDSPRYAPYDPSLPKPWRALVDGRNGNLYFWNPLTKVTQYERPSAS------- 2234
+S + +S PRYAP DP+LPKPWR L+DG G LYFWNP TKVTQYERP A+
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPSSPSQ 62
Query: 2233 -------------------ESENLVAQSCSAPSSDDPAIMNASSSGSGQTSLPNPRVPAL 2111
SE V++ P SD+ A + S S + P+
Sbjct: 63 PPGYSRHDEKPRSSAPSEQRSEAAVSRQQYVPPSDNRARNDHSEPRSASGVNLSQSAPST 122
Query: 2110 TAGNESPAG--LSAEAYRRHHEITVIGNHVPPPYTTFQSAGFPSEILRELQHAGFSAPTP 1937
+++ G +S EAYR HEIT++GN P P+ TFQS GFPSEILRE+ AGFSAPTP
Sbjct: 123 NQVSQAANGSQMSTEAYRAKHEITIVGNEAPAPFMTFQSTGFPSEILREVLQAGFSAPTP 182
Query: 1936 IQAQSWPIALDGRDIVAVAKTGSGKTLGYLIPGFIHLKNLGSNSQMGPLVLVLSPTRELA 1757
IQAQSWPIA+ GRDIVAVAKTGSGKTLGYL+PGFI LK L NS+ GP VLVLSPTRELA
Sbjct: 183 IQAQSWPIAIKGRDIVAVAKTGSGKTLGYLLPGFILLKRLQHNSREGPTVLVLSPTRELA 242
Query: 1756 TQIQDEAVKFGRSSRISSVCLYGGAPKGPQLRDLSKGAHVVVATPGRLNDILEMKKVSLH 1577
TQIQDEA+KFGRSSRISS CLYGGAPKGPQLR+L +GA VVVATPGRLNDILEM KVSL
Sbjct: 243 TQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRELERGADVVVATPGRLNDILEMNKVSLR 302
Query: 1576 QVSYLVLDEADRMLDMGFEPQIRRIVKEIPPRRQTLMYTATWPKEVRKIAADLLVNPVQV 1397
QVSYLVLDEADRMLDMGFEPQIR+IVK+IPPRRQTLMYTATWPKEVR+IA+DLL NPVQV
Sbjct: 303 QVSYLVLDEADRMLDMGFEPQIRKIVKQIPPRRQTLMYTATWPKEVRRIASDLLNNPVQV 362
Query: 1396 NIGNIDELVANKSITQHVEMISPMEKRKRLEQILHSQEPGSKIIIFCSTKRMCDQLARNL 1217
NIGN D+LVANKSITQHVE+I MEK +RL+QIL SQ+PGSKIIIFCSTKRMCDQLARNL
Sbjct: 363 NIGNTDQLVANKSITQHVEVIPHMEKSRRLDQILRSQDPGSKIIIFCSTKRMCDQLARNL 422
Query: 1216 GHQFGANAIHGDKSQNERDLVLNQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGV 1037
Q+GA+AIHGDKSQ+ERD VLN FR+G+ P+LVATDVAARGLDIKDIRVV+NYDFPTGV
Sbjct: 423 SRQYGASAIHGDKSQSERDSVLNDFRSGRCPVLVATDVAARGLDIKDIRVVVNYDFPTGV 482
Query: 1036 EDYVHRIXXXXXXXXXGVSYTFLSDQDSRYASDLVKVLEGANQCVPSELRDMAAQGGYGG 857
EDYVHRI G +YTF DQDS+YASDLVK+LEGANQ VP +L++MA +GGYGG
Sbjct: 483 EDYVHRIGRTGRAGATGSAYTFFGDQDSKYASDLVKILEGANQSVPQQLKEMALRGGYGG 542
Query: 856 RFRRWRSDSGVHDRVHSYGGTCTGSSYDKSPSFGGVCNDSSYDKGGGWGQALSSGWSDSI 677
R RRW S SYGG G+ + SF N+SS+ G G + S + +S
Sbjct: 543 RSRRWASSD------DSYGGQGYGAK-RSTDSF----NNSSFGNQAGGGSSFHSSFHNSS 591
Query: 676 SNHR 665
S ++
Sbjct: 592 SGNQ 595
>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
predicted protein [Populus trichocarpa]
Length = 791
Score = 742 bits (1916), Expect = 0.0
Identities = 404/628 (64%), Positives = 464/628 (73%), Gaps = 48/628 (7%)
Frame = -3
Query: 2395 LASMTVKSSDSPRYAPYDPSLPKPWRALVDGRNGNLYFWNPLTKVTQYERPSASESENLV 2216
+A+ SS PRYAP DP+LPKPWR LVDG+ G LYFWNP T VTQYERP+ +S + +
Sbjct: 1 MAATATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVSSL 60
Query: 2215 AQSCSA-----------PS--SDD-----------PAIMNASSSGSGQTS---------L 2135
+ S PS DD P + S S S Q++ +
Sbjct: 61 PITSSVQVHQSSHRGYNPSVKEDDRYGRANNAGSKPDAVTRSISSSNQSARGAAIQSENV 120
Query: 2134 PNPRVPALTA----GNESPAGLSAEAYRRHHEITVIGNHVPPPYTTFQSAGFPSEILREL 1967
PN L+A + +G+S EAYRR HEITV G+ VPPP T+F++ GFPSEIL+E+
Sbjct: 121 PNGTANGLSARVYGSSAGGSGMSGEAYRRRHEITVTGDEVPPPLTSFETTGFPSEILKEV 180
Query: 1966 QHAGFSAPTPIQAQSWPIALDGRDIVAVAKTGSGKTLGYLIPGFIHLKNLGSNSQMGPLV 1787
+AGFSAPTPIQAQSWPIAL RDIVAVAKTGSGKTLGYLIPGFIHLK ++ ++GP V
Sbjct: 181 LNAGFSAPTPIQAQSWPIALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRSCNDPRLGPTV 240
Query: 1786 LVLSPTRELATQIQDEAVKFGRSSRISSVCLYGGAPKGPQLRDLSKGAHVVVATPGRLND 1607
LVLSPTRELATQIQ EAVKFG+SSR S CLYGGAPKGPQL++L +GA +VVATPGRLND
Sbjct: 241 LVLSPTRELATQIQVEAVKFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVATPGRLND 300
Query: 1606 ILEMKKVSLHQVSYLVLDEADRMLDMGFEPQIRRIVKEIPPRRQTLMYTATWPKEVRKIA 1427
ILEM++VSL QVSYLVLDEADRMLDMGFEPQIR+IVKE+P RRQTLMYTATWPKEVRKIA
Sbjct: 301 ILEMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA 360
Query: 1426 ADLLVNPVQVNIGNIDELVANKSITQHVEMISPMEKRKRLEQILHSQEPGSKIIIFCSTK 1247
ADLLVNPVQVNIGN+DELVANKSITQ+VE+++P+EK +RLEQIL SQE GSKIIIFCSTK
Sbjct: 361 ADLLVNPVQVNIGNVDELVANKSITQYVELLAPLEKHRRLEQILRSQESGSKIIIFCSTK 420
Query: 1246 RMCDQLARNLGHQFGANAIHGDKSQNERDLVLNQFRTGKSPILVATDVAARGLDIKDIRV 1067
+MCDQL+RNL QFGA AIHGDKSQ+ERD VL+QFRTG+SPILVATDVAARGLDIKDIRV
Sbjct: 421 KMCDQLSRNLTRQFGAAAIHGDKSQSERDYVLSQFRTGRSPILVATDVAARGLDIKDIRV 480
Query: 1066 VINYDFPTGVEDYVHRIXXXXXXXXXGVSYTFLSDQDSRYASDLVKVLEGANQCVPSELR 887
VINYDFPTGVEDYVHRI GV+YTF DQD+++ASDL+KVLEGANQ VP E+R
Sbjct: 481 VINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEIR 540
Query: 886 DMAAQGGYG-GRFRRWRSDSGVHD------RVHSYGGT----CTGSSYDKSPSFGGVCND 740
DMA++GG G GRFRRW SG HD YGG + SS + GG ND
Sbjct: 541 DMASRGGGGMGRFRRW--GSGGHDGGRGGRSDFGYGGRGSWGMSNSSSSRPERGGGRGND 598
Query: 739 SSYDKGGGWGQALSSGWSDSISNHRPSP 656
YD+G G G D NH SP
Sbjct: 599 HEYDRGYGDGH-------DKGHNHNRSP 619
>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 739 bits (1909), Expect = 0.0
Identities = 401/603 (66%), Positives = 446/603 (73%), Gaps = 43/603 (7%)
Frame = -3
Query: 2374 SSDSPRYAPYDPSLPKPWRALVDGRNGNLYFWNPLTKVTQYERP---------------- 2243
++ PRYAP DP+LPKPW+ LVDG+ G LYFWNP T VTQYERP
Sbjct: 4 TATGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNASLAPPPK 63
Query: 2242 -SASESENLVAQSCSAPSSDDPAI----------MNASSSGSGQT----SLPNPRVPALT 2108
SAS S ++ Q S D + N S G T PN V A
Sbjct: 64 SSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRARNLQQSARGGTVHSHDPPNGIVGAGH 123
Query: 2107 AGNE--------SPAGLSAEAYRRHHEITVIGNHVPPPYTTFQSAGFPSEILRELQHAGF 1952
G+ +G S E+YRR HEITV G+ VP P+T+F+S GFP EI+RE+ AGF
Sbjct: 124 GGSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGF 183
Query: 1951 SAPTPIQAQSWPIALDGRDIVAVAKTGSGKTLGYLIPGFIHLKNLGSNSQMGPLVLVLSP 1772
SAPTPIQAQSWP+AL RDIVA+AKTGSGKTLGYLIPGFIHLK + +N QMGP VLVLSP
Sbjct: 184 SAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLVLSP 243
Query: 1771 TRELATQIQDEAVKFGRSSRISSVCLYGGAPKGPQLRDLSKGAHVVVATPGRLNDILEMK 1592
TRELATQIQDEAVKFGRSSR+S CLYGGAPKGPQLRDL +GA +VVATPGRLNDILEM+
Sbjct: 244 TRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMR 303
Query: 1591 KVSLHQVSYLVLDEADRMLDMGFEPQIRRIVKEIPPRRQTLMYTATWPKEVRKIAADLLV 1412
+VSL QVSYLVLDEADRMLDMGFEPQIR+IVKE+P RRQTLMYTATWPKEVRKIAADLLV
Sbjct: 304 RVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLV 363
Query: 1411 NPVQVNIGNIDELVANKSITQHVEMISPMEKRKRLEQILHSQEPGSKIIIFCSTKRMCDQ 1232
NPVQVNIGN+DELVANK+ITQ+VE++ MEK KRLEQIL SQEPGSKIIIFCSTK+MCDQ
Sbjct: 364 NPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQ 423
Query: 1231 LARNLGHQFGANAIHGDKSQNERDLVLNQFRTGKSPILVATDVAARGLDIKDIRVVINYD 1052
LARNL FGA AIHGDKSQ ERD VLNQFRTG+SP+LVATDVAARGLDIKDIRVVINYD
Sbjct: 424 LARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYD 483
Query: 1051 FPTGVEDYVHRIXXXXXXXXXGVSYTFLSDQDSRYASDLVKVLEGANQCVPSELRDMAAQ 872
FPTGVEDYVHRI GV+YTF ++QD++YASDLVKVLEGANQ VP E+RDMA++
Sbjct: 484 FPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEIRDMASR 543
Query: 871 GGYGGRFRRWRSDSGVHDRVHSYGGTCTGSSYDKSPSFGGVCNDSSY---DKG-GGWGQA 704
GG GR RRW S +G D GG G NDSSY D G GGWG A
Sbjct: 544 GGGMGRSRRWGSGTGGRD-----GGR-------------GGRNDSSYGGRDGGRGGWGMA 585
Query: 703 LSS 695
SS
Sbjct: 586 PSS 588
>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 739 bits (1909), Expect = 0.0
Identities = 401/603 (66%), Positives = 446/603 (73%), Gaps = 43/603 (7%)
Frame = -3
Query: 2374 SSDSPRYAPYDPSLPKPWRALVDGRNGNLYFWNPLTKVTQYERP---------------- 2243
++ PRYAP DP+LPKPW+ LVDG+ G LYFWNP T VTQYERP
Sbjct: 4 TATGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNASLAPPPK 63
Query: 2242 -SASESENLVAQSCSAPSSDDPAI----------MNASSSGSGQT----SLPNPRVPALT 2108
SAS S ++ Q S D + N S G T PN V A
Sbjct: 64 SSASISSSVQVQQSSQGQRRDHGLNEEDDKYNRARNLQQSARGGTVHSHDPPNGIVGAGH 123
Query: 2107 AGNE--------SPAGLSAEAYRRHHEITVIGNHVPPPYTTFQSAGFPSEILRELQHAGF 1952
G+ +G S E+YRR HEITV G+ VP P+T+F+S GFP EI+RE+ AGF
Sbjct: 124 GGSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGF 183
Query: 1951 SAPTPIQAQSWPIALDGRDIVAVAKTGSGKTLGYLIPGFIHLKNLGSNSQMGPLVLVLSP 1772
SAPTPIQAQSWP+AL RDIVA+AKTGSGKTLGYLIPGFIHLK + +N QMGP VLVLSP
Sbjct: 184 SAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLVLSP 243
Query: 1771 TRELATQIQDEAVKFGRSSRISSVCLYGGAPKGPQLRDLSKGAHVVVATPGRLNDILEMK 1592
TRELATQIQDEAVKFGRSSR+S CLYGGAPKGPQLRDL +GA +VVATPGRLNDILEM+
Sbjct: 244 TRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMR 303
Query: 1591 KVSLHQVSYLVLDEADRMLDMGFEPQIRRIVKEIPPRRQTLMYTATWPKEVRKIAADLLV 1412
+VSL QVSYLVLDEADRMLDMGFEPQIR+IVKE+P RRQTLMYTATWPKEVRKIAADLLV
Sbjct: 304 RVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLV 363
Query: 1411 NPVQVNIGNIDELVANKSITQHVEMISPMEKRKRLEQILHSQEPGSKIIIFCSTKRMCDQ 1232
NPVQVNIGN+DELVANK+ITQ+VE++ MEK KRLEQIL SQEPGSKIIIFCSTK+MCDQ
Sbjct: 364 NPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQ 423
Query: 1231 LARNLGHQFGANAIHGDKSQNERDLVLNQFRTGKSPILVATDVAARGLDIKDIRVVINYD 1052
LARNL FGA AIHGDKSQ ERD VLNQFRTG+SP+LVATDVAARGLDIKDIRVVINYD
Sbjct: 424 LARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYD 483
Query: 1051 FPTGVEDYVHRIXXXXXXXXXGVSYTFLSDQDSRYASDLVKVLEGANQCVPSELRDMAAQ 872
FPTGVEDYVHRI GV+YTF ++QD++YASDLVKVLEGANQ VP E+RDMA++
Sbjct: 484 FPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEIRDMASR 543
Query: 871 GGYGGRFRRWRSDSGVHDRVHSYGGTCTGSSYDKSPSFGGVCNDSSY---DKG-GGWGQA 704
GG GR RRW S +G D GG G NDSSY D G GGWG A
Sbjct: 544 GGGMGRSRRWGSGTGGRD-----GGR-------------GGRNDSSYGGRDGGRGGWGMA 585
Query: 703 LSS 695
SS
Sbjct: 586 PSS 588