BLASTX nr result

ID: Dioscorea21_contig00015539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015539
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40061.1| unknown [Medicago truncatula]                           85   7e-15
emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]      85   7e-15
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]       84   2e-14
gb|AFK39586.1| unknown [Medicago truncatula]                           83   2e-14
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...    82   3e-14

>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/51 (80%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
 Frame = +2

Query: 83  GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRPKYLGPFSGE 232
           GK VKL+PS  ELGA RF+MR+A TTKKV SSGSPWYGPDR KYLGPFSGE
Sbjct: 15  GKPVKLTPSSQELGAARFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGE 65


>emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
          Length = 266

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/51 (80%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
 Frame = +2

Query: 83  GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRPKYLGPFSGE 232
           GK VKLSPS  ELGA RF+MR++ TTKKV SSGSPWYGPDR KYLGPFSGE
Sbjct: 15  GKPVKLSPSSQELGASRFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGE 65


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/51 (78%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
 Frame = +2

Query: 83  GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRPKYLGPFSGE 232
           GK VKL+PS  ELGA RF+MR++ TTKKV SSGSPWYGPDR KYLGPFSGE
Sbjct: 15  GKPVKLTPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGE 65


>gb|AFK39586.1| unknown [Medicago truncatula]
          Length = 265

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = +2

Query: 83  GKAVKLSPSGAELGAGRFSMRRATTTKKVSSGSPWYGPDRPKYLGPFSGE 232
           GKA+KLSPS  ++G GR +MR+ATT K V SGSPWYGPDR KYLGPFSGE
Sbjct: 15  GKAIKLSPSTQDIGVGRVTMRKATTKKSVPSGSPWYGPDRVKYLGPFSGE 64


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
 Frame = +2

Query: 83  GKAVKLSPSGAELGAGRFSMRRATTTKKV-SSGSPWYGPDRPKYLGPFSGE 232
           GK +KL+PS  ELGA RF+MR++ TTKKV SSGSPWYGPDR KYLGPFSGE
Sbjct: 18  GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGE 68


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