BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015511
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   561   e-157
ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containi...   553   e-155
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   552   e-155
dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]    550   e-154
gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indi...   549   e-154

>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Vitis vinifera]
            gi|296082481|emb|CBI21486.3| unnamed protein product
            [Vitis vinifera]
          Length = 489

 Score =  561 bits (1447), Expect = e-157
 Identities = 278/410 (67%), Positives = 335/410 (81%), Gaps = 3/410 (0%)
 Frame = +1

Query: 133  TFPIPKPRHSLLPIRVPIKP---VRALAQIPSRPKKKAVSNPEGPSEAEELVRTLLKKAD 303
            TF +P  R    P R+ + P      ++ + +RP++K    P+  SE EELVR L+K   
Sbjct: 23   TFTLPSSRF-YKPTRLHLPPRPSTTVVSCVSTRPRRKPGPKPD-KSEVEELVRVLMKNFG 80

Query: 304  GDDKRPLVSTLDKHVKILRTEHCFLLFEELGRRDRWLQCLEVFRWMQKQRWYIADNGIYS 483
            G+  RPL+STL+K+VK++RTEHCF LFEELG+ D+WLQCLEVFRWMQKQRWYIADNG+YS
Sbjct: 81   GE--RPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYS 138

Query: 484  KLISIMGKKGQTRSAMWLFSEMRSSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYFQK 663
            KLIS+MGKKGQTR AMWLFSEMR+SGCRPDTSVYNALITAHLHS+DK+KAL KA+GYF K
Sbjct: 139  KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDK 198

Query: 664  MKGIERCKPNTVTYNILLRAFAQAGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGKNR 843
            MKG+ERCKPN VTYNILLRAFAQA +V Q   LFK+L  S VSPDI+T+NGVMDAYGKN 
Sbjct: 199  MKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNG 258

Query: 844  MVAEMESVLRLMKSNQCKPDVITFNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFN 1023
            M+ EMESVL  MKSNQCKPD+ITFN+LIDSYG+RQ FDKMEQVFKSLLRSKEKPTLPTFN
Sbjct: 259  MIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFN 318

Query: 1024 SMITSYGRARLRDKAESVFKNMNELGFKPSTVTYDCLITAYGYCDSVSRAREIFDEILNT 1203
            SMIT+YG+ARL++KAE+VFK M ++G+ P+ +TY+ LI  YG+CD +SRAREIFDE++ +
Sbjct: 319  SMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMAS 378

Query: 1204 QKDVQVSTLNAMLDAYCINNLQAEADQLLGLALSKGLKTNASTYKLLYGA 1353
            +K+++VSTLNAML+ YC+N L  EAD LL  A        +STYKLLY A
Sbjct: 379  KKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKA 428



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
 Frame = +1

Query: 478  YSKLISIMGKKGQTRSAMWLFSEMRSSGCRPDTSVYNALITAH----------------L 609
            ++ ++   GK G  +    + S M+S+ C+PD   +N LI ++                L
Sbjct: 247  FNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLL 306

Query: 610  HSKDK---------------TKALAKAMGYFQKMKGIERCKPNTVTYNILLRAFAQAGDV 744
             SK+K                +   KA   F+KM  +    PN +TY  L+  +     +
Sbjct: 307  RSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYA-PNFITYESLIMMYGFCDCI 365

Query: 745  KQVEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRLMKSNQCKPDVITFNLL 924
             +  E+F ++ AS+    + T N +++ Y  N +  E + +L   + N+  P   T+ LL
Sbjct: 366  SRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLL 425

Query: 925  IDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITSYG 1044
              +Y K    + +E++ K +      P    F   + ++G
Sbjct: 426  YKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFG 465


>ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Brachypodium distachyon]
          Length = 519

 Score =  553 bits (1425), Expect = e-155
 Identities = 272/387 (70%), Positives = 323/387 (83%)
 Frame = +1

Query: 193  VRALAQIPSRPKKKAVSNPEGPSEAEELVRTLLKKADGDDKRPLVSTLDKHVKILRTEHC 372
            V A A  P+R K++  ++  G  EA ELVR  L+K  G  +R LV+ LD+HVK++RTEHC
Sbjct: 22   VAAAAAAPARGKRRGAADA-GEGEAAELVRFFLRKTAGGKER-LVAVLDRHVKVVRTEHC 79

Query: 373  FLLFEELGRRDRWLQCLEVFRWMQKQRWYIADNGIYSKLISIMGKKGQTRSAMWLFSEMR 552
            FLLFEELGR D W+QCLE+FRWMQKQRWY+ADNGIYSKLIS+MGKKGQ R AMWLFS+MR
Sbjct: 80   FLLFEELGRHDGWVQCLEIFRWMQKQRWYVADNGIYSKLISVMGKKGQIRMAMWLFSQMR 139

Query: 553  SSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYFQKMKGIERCKPNTVTYNILLRAFAQ 732
            +SGC+PDTSVYN+LI AHLHS+DK+KALAKA+GYF KMK IERC+PN VTYNILLRA A+
Sbjct: 140  NSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFDKMKTIERCQPNIVTYNILLRACAR 199

Query: 733  AGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRLMKSNQCKPDVIT 912
            A D KQVE LFKDL  S V+PDIYTYNGV+D YGKN M+ EMESVL  MKS QC+PDVIT
Sbjct: 200  ASDAKQVEILFKDLDESLVTPDIYTYNGVIDGYGKNGMIKEMESVLVRMKSKQCRPDVIT 259

Query: 913  FNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITSYGRARLRDKAESVFKNMN 1092
            FN+LIDSYG++Q FDKMEQVFKSLLRSKE+PT PTFNSMIT+YG+ARL++KAESV + M+
Sbjct: 260  FNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLKEKAESVLEKMD 319

Query: 1093 ELGFKPSTVTYDCLITAYGYCDSVSRAREIFDEILNTQKDVQVSTLNAMLDAYCINNLQA 1272
            ELGFKPS VT +CLI  Y YCD VS+A++IFDE++N+Q  V +S+LNAMLDAYC+N L  
Sbjct: 320  ELGFKPSYVTQECLIMMYAYCDCVSKAQQIFDELVNSQSTVPLSSLNAMLDAYCMNRLPM 379

Query: 1273 EADQLLGLALSKGLKTNASTYKLLYGA 1353
            EAD+LL  A+ KG+   ASTYKLLY A
Sbjct: 380  EADRLLDAAIEKGVVPGASTYKLLYKA 406


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  552 bits (1422), Expect = e-155
 Identities = 271/381 (71%), Positives = 321/381 (84%)
 Frame = +1

Query: 211  IPSRPKKKAVSNPEGPSEAEELVRTLLKKADGDDKRPLVSTLDKHVKILRTEHCFLLFEE 390
            + +RP+KK     E  SE E+LVR +L+    D K PLV TLDK+V+++RTEHCFLLFEE
Sbjct: 48   VSTRPRKKRFPISE-ESETEDLVRYVLRSFSSD-KVPLVRTLDKYVRVVRTEHCFLLFEE 105

Query: 391  LGRRDRWLQCLEVFRWMQKQRWYIADNGIYSKLISIMGKKGQTRSAMWLFSEMRSSGCRP 570
            LGRRD+WLQCLEVFRWMQKQRWYIAD+G+YSKLIS+MGKKGQTR AMWLFSEMR+SGCRP
Sbjct: 106  LGRRDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRP 165

Query: 571  DTSVYNALITAHLHSKDKTKALAKAMGYFQKMKGIERCKPNTVTYNILLRAFAQAGDVKQ 750
            D+SVYNALITAHLHSKDK KAL KA+GYF+KMKG++RC+PN VTYNILLRAFAQA +V Q
Sbjct: 166  DSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQ 225

Query: 751  VEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRLMKSNQCKPDVITFNLLID 930
            V  LFKDL  S VSPDIYTYNGVMDAYGKN M+ EMESVL  MKSNQCKPD+ITFNLLID
Sbjct: 226  VNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLID 285

Query: 931  SYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITSYGRARLRDKAESVFKNMNELGFKP 1110
            SYGK+Q FDKMEQVFKSLL SKE+PTLPTFNSMIT+YG+AR ++ AESV + M ++ + P
Sbjct: 286  SYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTP 345

Query: 1111 STVTYDCLITAYGYCDSVSRAREIFDEILNTQKDVQVSTLNAMLDAYCINNLQAEADQLL 1290
            + +TY+ LI  YG+CDSVS+AREIFD+++ + K+V+VSTLNAMLD YC+N L  EAD L 
Sbjct: 346  NFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLF 405

Query: 1291 GLALSKGLKTNASTYKLLYGA 1353
              A + GL  +++TYKLLY A
Sbjct: 406  DNARNVGLLPDSTTYKLLYKA 426



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
 Frame = +1

Query: 478 YSKLISIMGKKGQTRSAMWLFSEMRSSGCRPDTSVYNALITAH----------------L 609
           Y+ ++   GK G  R    + S M+S+ C+PD   +N LI ++                L
Sbjct: 245 YNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLL 304

Query: 610 HSKD---------------KTKALAKAMGYFQKMKGIERCKPNTVTYNILLRAFAQAGDV 744
           HSK+               K +    A    QKM  + +  PN +TY  L+  +     V
Sbjct: 305 HSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKM-KYTPNFITYESLIMMYGFCDSV 363

Query: 745 KQVEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRLMKSNQCKPDVITFNLL 924
            +  E+F D+  S     + T N ++D Y  N +  E + +    ++    PD  T+ LL
Sbjct: 364 SKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLLPDSTTYKLL 423

Query: 925 IDSYGKRQAFDKMEQVFKSLLR 990
             +Y K      ++++ K + R
Sbjct: 424 YKAYTKANMKKLVQKLLKHMDR 445


>dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 539

 Score =  550 bits (1418), Expect = e-154
 Identities = 272/399 (68%), Positives = 327/399 (81%), Gaps = 4/399 (1%)
 Frame = +1

Query: 169  PIRVPIKPVRALAQIPSRPKKKAVSNPEGPSE----AEELVRTLLKKADGDDKRPLVSTL 336
            P RV +    A A  P+R K++     +G ++    A ELVR  L++ DG   R LVS L
Sbjct: 21   PRRVAV--AAAPAGAPARGKRRRAGAGDGEADPAAGAAELVRFFLRRTDGGKDR-LVSVL 77

Query: 337  DKHVKILRTEHCFLLFEELGRRDRWLQCLEVFRWMQKQRWYIADNGIYSKLISIMGKKGQ 516
            D+HVK++RTEHCFLLFEELGRRD W+QCLE+FRWMQKQRWY+ADNGIYSKLIS+MG+KGQ
Sbjct: 78   DRHVKVVRTEHCFLLFEELGRRDGWVQCLEIFRWMQKQRWYVADNGIYSKLISVMGRKGQ 137

Query: 517  TRSAMWLFSEMRSSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYFQKMKGIERCKPNT 696
             R AMWLFS+MR+SGC+PDTSVYN+LI AHLHS+DK+KAL KA+GYF KMKG+ERC+PN 
Sbjct: 138  IRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALVKALGYFDKMKGMERCQPNI 197

Query: 697  VTYNILLRAFAQAGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRL 876
            VTYNILLRA A+A D KQV+ LFKDL  S VSPDIYTYNGV+D YGKN M+ EMESVL  
Sbjct: 198  VTYNILLRACARASDTKQVDILFKDLDESIVSPDIYTYNGVIDGYGKNGMITEMESVLVR 257

Query: 877  MKSNQCKPDVITFNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITSYGRARL 1056
            MKS QC+PDVITFN+LIDSYG++Q FDKMEQVFKSLLRSKE+PT PTFNSMIT+YG+ARL
Sbjct: 258  MKSKQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARL 317

Query: 1057 RDKAESVFKNMNELGFKPSTVTYDCLITAYGYCDSVSRAREIFDEILNTQKDVQVSTLNA 1236
            R+KAESV + M ELGFKP+ VT +CLI  Y YCD VS+A++IFDE++++Q  V +S+LNA
Sbjct: 318  REKAESVIEKMQELGFKPNYVTQECLINMYAYCDCVSKAQQIFDELVSSQSTVPLSSLNA 377

Query: 1237 MLDAYCINNLQAEADQLLGLALSKGLKTNASTYKLLYGA 1353
            MLDAYC+N L  EAD+LL  A+ KG+  +ASTYKLLY A
Sbjct: 378  MLDAYCMNRLPMEADRLLDTAIEKGVVPSASTYKLLYRA 416



 Score =  103 bits (257), Expect = 1e-19
 Identities = 63/223 (28%), Positives = 110/223 (49%)
 Frame = +1

Query: 478  YSKLISIMGKKGQTRSAMWLFSEMRSSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYF 657
            Y+ L+    +   T+    LF ++  S   PD   YN +I  +     K   + +     
Sbjct: 200  YNILLRACARASDTKQVDILFKDLDESIVSPDIYTYNGVIDGY----GKNGMITEMESVL 255

Query: 658  QKMKGIERCKPNTVTYNILLRAFAQAGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGK 837
             +MK  ++C+P+ +T+NIL+ ++ +     ++E++FK L  S+  P   T+N ++  YGK
Sbjct: 256  VRMKS-KQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGK 314

Query: 838  NRMVAEMESVLRLMKSNQCKPDVITFNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPT 1017
             R+  + ESV+  M+    KP+ +T   LI+ Y       K +Q+F  L+ S+    L +
Sbjct: 315  ARLREKAESVIEKMQELGFKPNYVTQECLINMYAYCDCVSKAQQIFDELVSSQSTVPLSS 374

Query: 1018 FNSMITSYGRARLRDKAESVFKNMNELGFKPSTVTYDCLITAY 1146
             N+M+ +Y   RL  +A+ +     E G  PS  TY  L  AY
Sbjct: 375  LNAMLDAYCMNRLPMEADRLLDTAIEKGVVPSASTYKLLYRAY 417


>gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
          Length = 482

 Score =  549 bits (1415), Expect = e-154
 Identities = 271/387 (70%), Positives = 318/387 (82%), Gaps = 14/387 (3%)
 Frame = +1

Query: 235  AVSNPEGPSEAEELVRTLLKKADGDDKRPLVSTLDKHVKILRTEHCFLLFEELGRRDRWL 414
            A    +  +EA +LVR  L++  G  +R LV+ LD+HVK++RTEHCFLLFEELGRRD WL
Sbjct: 17   AAEGADEAAEAADLVRFFLRRTSGGKER-LVAVLDRHVKVVRTEHCFLLFEELGRRDGWL 75

Query: 415  QCLE--------------VFRWMQKQRWYIADNGIYSKLISIMGKKGQTRSAMWLFSEMR 552
            QCLE              VFRWMQKQRWY+ADNGIYSKLIS+MG+KGQ R AMWLFS+MR
Sbjct: 76   QCLEGVDVDQQEMNFEVPVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMR 135

Query: 553  SSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYFQKMKGIERCKPNTVTYNILLRAFAQ 732
            +SGCRPDTSVYN+LI AHLHS+DK+KALAKA+GYF+KMK I+RC+PN VTYNILLRAFAQ
Sbjct: 136  NSGCRPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQ 195

Query: 733  AGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGKNRMVAEMESVLRLMKSNQCKPDVIT 912
            AGD KQ++ LFKDL  S VSPDIYTYNGVMDAYGKN M+ EMESVL  MKSNQC+PDVIT
Sbjct: 196  AGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVIT 255

Query: 913  FNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITSYGRARLRDKAESVFKNMN 1092
            FN+LIDSYG++QAFDKMEQVFKSLLRSKEKPT PTFNSMIT+YG+ARLR+KAE V   M 
Sbjct: 256  FNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMT 315

Query: 1093 ELGFKPSTVTYDCLITAYGYCDSVSRAREIFDEILNTQKDVQVSTLNAMLDAYCINNLQA 1272
            E+GFKP+ VT +CLI  Y YCD VSRAR+IFDE++++Q +V +S++NAMLDAYC+N L  
Sbjct: 316  EMGFKPNYVTQECLIMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPM 375

Query: 1273 EADQLLGLALSKGLKTNASTYKLLYGA 1353
            EADQLL   + KG   +ASTYKLLY A
Sbjct: 376  EADQLLDSVIKKGAVPSASTYKLLYKA 402



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 61/223 (27%), Positives = 108/223 (48%)
 Frame = +1

Query: 478  YSKLISIMGKKGQTRSAMWLFSEMRSSGCRPDTSVYNALITAHLHSKDKTKALAKAMGYF 657
            Y+ L+    + G T+    LF ++  S   PD   YN ++ A+     K   + +     
Sbjct: 186  YNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAY----GKNGMITEMESVL 241

Query: 658  QKMKGIERCKPNTVTYNILLRAFAQAGDVKQVEELFKDLKASEVSPDIYTYNGVMDAYGK 837
             +MK   +C+P+ +T+NIL+ ++ +     ++E++FK L  S+  P   T+N ++  YGK
Sbjct: 242  VRMKS-NQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPTFNSMITNYGK 300

Query: 838  NRMVAEMESVLRLMKSNQCKPDVITFNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPT 1017
             R+  + E VL  M     KP+ +T   LI  Y       +  Q+F  L+ S+    L +
Sbjct: 301  ARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDCVSRARQIFDELVSSQNNVHLSS 360

Query: 1018 FNSMITSYGRARLRDKAESVFKNMNELGFKPSTVTYDCLITAY 1146
             N+M+ +Y    L  +A+ +  ++ + G  PS  TY  L  AY
Sbjct: 361  VNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYKAY 403