BLASTX nr result

ID: Dioscorea21_contig00015489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015489
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]      78   8e-13
ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group] g...    71   8e-11
gb|ADB85257.1| putative retrotransposon protein [Phyllostachys e...    69   4e-10
gb|EAZ12182.1| hypothetical protein OsJ_02065 [Oryza sativa Japo...    68   9e-10
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                  67   1e-09

>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = -1

Query: 257 LQQGEDTVDQFYSRYSAVWRQIDALTPPYCAAHATQILTCSESCSRRRRHDETRRMYEFI 78
           LQQG+ TVD+FY++ S++WRQ+D+L P  C  +          C R+R H + RR+Y+F+
Sbjct: 151 LQQGDSTVDEFYTQLSSIWRQLDSLGPTICHTY--------PCCQRQRSHMDLRRIYDFL 202

Query: 77  MRLRPEFEPTRAQLL 33
            RLR E+E TRAQLL
Sbjct: 203 TRLRSEYESTRAQLL 217


>ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group]
           gi|255671092|dbj|BAH91807.1| Os02g0616666 [Oryza sativa
           Japonica Group]
          Length = 1228

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/75 (50%), Positives = 48/75 (64%)
 Frame = -1

Query: 257 LQQGEDTVDQFYSRYSAVWRQIDALTPPYCAAHATQILTCSESCSRRRRHDETRRMYEFI 78
           L+Q + TVD+F+ + SAVWRQ+D      C        TC+  C R+R   ET R+YEF+
Sbjct: 12  LRQLDATVDEFFRKMSAVWRQMDLQGADVCR-------TCT-CCQRQRVQTETTRLYEFL 63

Query: 77  MRLRPEFEPTRAQLL 33
            RLRPEFEP RAQLL
Sbjct: 64  SRLRPEFEPVRAQLL 78


>gb|ADB85257.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 2039

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -1

Query: 257 LQQGEDTVDQFYSRYSAVWRQIDALTPPYCAAHATQILTCSESCSRRRRHD-ETRRMYEF 81
           LQQG+ T+D FY++ SAVWRQ+D+L    C         CS  C    R D E +R+Y+F
Sbjct: 444 LQQGDATIDAFYAQSSAVWRQLDSLLTAGC---------CSYPCCLAVRADLEFQRVYDF 494

Query: 80  IMRLRPEFEPTRAQLL 33
           + RLRPEFE  RAQLL
Sbjct: 495 LTRLRPEFEQRRAQLL 510


>gb|EAZ12182.1| hypothetical protein OsJ_02065 [Oryza sativa Japonica Group]
          Length = 404

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = -1

Query: 257 LQQGEDTVDQFYSRYSAVWRQIDALTPPYCAAHATQILTCSESCSRRRRHDETRRMYEFI 78
           L+Q + TVD+F+ + S VWRQ+D      C        TC+  C R+R   ET R+YEF+
Sbjct: 231 LRQLDATVDEFFRKMSTVWRQMDLQGADVCR-------TCT-CCQRQRVQTETTRLYEFL 282

Query: 77  MRLRPEFEPTRAQLL 33
             LRPEFEP RAQLL
Sbjct: 283 SHLRPEFEPVRAQLL 297


>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/75 (49%), Positives = 46/75 (61%)
 Frame = -1

Query: 257 LQQGEDTVDQFYSRYSAVWRQIDALTPPYCAAHATQILTCSESCSRRRRHDETRRMYEFI 78
           LQQG+ TVD FY++ SAVWRQ+D+L    C +           C   R   E +R+YEF+
Sbjct: 157 LQQGDATVDAFYAQSSAVWRQLDSLRTAGCRS--------CPCCLAVRADLEFQRVYEFL 208

Query: 77  MRLRPEFEPTRAQLL 33
            RLRPEFE  RAQLL
Sbjct: 209 TRLRPEFEQRRAQLL 223


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