BLASTX nr result

ID: Dioscorea21_contig00015488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015488
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...    85   7e-15
ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subun...    80   2e-13
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...    78   8e-13
gb|ACU19554.1| unknown [Glycine max]                                   78   8e-13
ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo...    77   1e-12

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +2

Query: 2   PPKTKVWGLWKVEGSRKAKKNLPSEHNISRNGYEGRDGSDGEKGTPQTEEASTPV 166
           PPKT+VWGLWKVEGSRKAKKNLPSEH + +NG++   G D EKGT Q +EAS+PV
Sbjct: 269 PPKTRVWGLWKVEGSRKAKKNLPSEHKLLQNGHQ---GGDDEKGTEQEKEASSPV 320


>ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223527632|gb|EEF29744.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 334

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +2

Query: 2   PPKTKVWGLWKVEGSRKAKKNLPSEHNISRNGYEGRDGSDGEKGTPQTEE 151
           PPKT+VW LWK+EG +KAKKNLPSEH I RNGY GR G D ++GT Q ++
Sbjct: 280 PPKTRVWDLWKIEGGKKAKKNLPSEHKILRNGYAGRQGDDEDRGTDQEKD 329


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +2

Query: 2   PPKTKVWGLWKVEGSRKAKKNLPSEHNISRNGYEGRDGSDGEKGTPQTEEASTPV 166
           PPKT+VW  WK+EGSRKAKKNLPSEH   +N  +G  GSDG+KGT Q  E  TPV
Sbjct: 268 PPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASKGSQGSDGDKGTVQ--EGETPV 320


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +2

Query: 2   PPKTKVWGLWKVEGSRKAKKNLPSEHNISRNGYEGRDGSDGEKGTPQTEEASTPV 166
           PPKT+VW  WK+EGSRKAKKNLPSEH   +N  +G  GSDG+KGT Q  E  TPV
Sbjct: 268 PPKTRVWDQWKIEGSRKAKKNLPSEHKFLQNASKGSQGSDGDKGTVQ--EGETPV 320


>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Cucumis sativus]
          Length = 339

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/56 (66%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = +2

Query: 2   PPKTKVWGLWKVEGSRKAKKNLPSEHNISRNGY-EGRDGSDGEKGTPQTEEASTPV 166
           PPKT++W LWKVEGSRKAKKNLPSE  I +NGY EG  GSD E+G  Q  E  +PV
Sbjct: 284 PPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339


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