BLASTX nr result

ID: Dioscorea21_contig00015477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015477
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452286.1| hypothetical protein SORBIDRAFT_04g023010 [S...   237   5e-60
ref|NP_001149074.1| nucleic acid binding protein [Zea mays] gi|1...   230   8e-58
dbj|BAD46509.1| proline-rich spliceosome-associated protein-like...   226   1e-56
ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247...   224   6e-56
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              219   2e-54

>ref|XP_002452286.1| hypothetical protein SORBIDRAFT_04g023010 [Sorghum bicolor]
            gi|241932117|gb|EES05262.1| hypothetical protein
            SORBIDRAFT_04g023010 [Sorghum bicolor]
          Length = 519

 Score =  237 bits (605), Expect = 5e-60
 Identities = 149/357 (41%), Positives = 193/357 (54%), Gaps = 2/357 (0%)
 Frame = +1

Query: 1    LDNKRRKEEINDIQLENESVPLYDRGYTLGSTSVDGSTNSNWIETPDTSRCFNCGSYSHM 180
            +DN+ R+ +I D    ++SVPLYDR +TLGST +  S+N+   +  D SRCFNCGSYSH 
Sbjct: 206  VDNQARESDIVD----DDSVPLYDREFTLGSTPLGDSSNTERADKDD-SRCFNCGSYSHA 260

Query: 181  LRECPRPRNRFAISNARRLHGSKRNQPSGPRVQIRYYQKSSGKIDDIKPGVLGTEAKESL 360
            L++CP+PR+ FAISNAR+ H  KRNQ +  RVQ RYYQK+ GK DD+K GVLG E ++ L
Sbjct: 261  LKDCPKPRDNFAISNARKQHNLKRNQSNVNRVQNRYYQKTPGKFDDLKAGVLGPETRQCL 320

Query: 361  GIRESDPPPWLHRTQEPGHPPGYLEGAEDEDQPSGITIFSXXXXXXXXXXXXXXXXXXXX 540
            GI E+DPPPWLHR +E G+PPGYL+  +DED+PSGITIF                     
Sbjct: 321  GIGENDPPPWLHRMRELGYPPGYLDVVDDEDKPSGITIFG-DGEMKLEYEEGELSEQAEA 379

Query: 541  XXPLRKMAAEFPGINASSPANANQRLWAVHSGGFPGSYPSKXXXXXXXXXXXXXXXXXXX 720
              P ++M  EFPGINA  P N +Q LW    G  P    S+                   
Sbjct: 380  SPPKKRMTVEFPGINAPVPENGDQWLW----GSAPPQSSSRHHSLD-------------- 421

Query: 721  XXWSEDHRDNRLPSSD--TCGYYSPRYSPYGQYPALNRSLSDRERGTPLPDKNSANPFTY 894
               S D+RD   P +D  +  Y+S  Y P    P+L RS SDR            +P  Y
Sbjct: 422  ---SRDYRDRGPPGADHYSSRYHSHDYGPLS--PSLGRSHSDR---------GWRSPPRY 467

Query: 895  XXXXXXXGTTRQSSYHSPTTSGEHRKNYSSYNGITSPSVSSQQARDRHDHHYRNHSR 1065
                   G     SY S   SG    +YSS + ++S   S  + RDRHD  + +H R
Sbjct: 468  DNPPADDGAWTPHSYPSRQYSG----HYSSSSDMSSRH-SRDRDRDRHDSRHYHHRR 519


>ref|NP_001149074.1| nucleic acid binding protein [Zea mays] gi|195624520|gb|ACG34090.1|
            nucleic acid binding protein [Zea mays]
            gi|238006148|gb|ACR34109.1| unknown [Zea mays]
          Length = 527

 Score =  230 bits (586), Expect = 8e-58
 Identities = 145/358 (40%), Positives = 190/358 (53%), Gaps = 3/358 (0%)
 Frame = +1

Query: 1    LDNKRRKEEINDIQLENESVPLYDRGYTLGSTSVDGSTNSNWIETPDTSRCFNCGSYSHM 180
            +DN+ R+ +  D    + SVPLYDR +TL ST + GS+N+  ++  D SRCFNCGSYSH 
Sbjct: 214  VDNQARESDTVD----DGSVPLYDREFTLHSTPLGGSSNTERVDKDD-SRCFNCGSYSHA 268

Query: 181  LRECPRPRNRFAISNARRLHGSKRNQPSGPRVQIRYYQKSSGKIDDIKPGVLGTEAKESL 360
            +++CP+PR+  AISNAR+ H  KRNQ +  RVQ RYYQK+ GK DD+K GVLG E ++ L
Sbjct: 269  MKDCPKPRDNVAISNARKQHNLKRNQSNVNRVQNRYYQKTPGKFDDLKAGVLGPETRQCL 328

Query: 361  GIRESDPPPWLHRTQEPGHPPGYLEGAEDEDQPSGITIFSXXXXXXXXXXXXXXXXXXXX 540
            GI E+DPPPWLHR +E G+PPGYL+  +DED+PSGITIF                     
Sbjct: 329  GIGENDPPPWLHRMRELGYPPGYLDVVDDEDRPSGITIFG-DGEVKLEYEEGELSEQGEA 387

Query: 541  XXPLRKMAAEFPGINASSPANANQRLWAVHSGGFPGSYPSKXXXXXXXXXXXXXXXXXXX 720
              P +KM  EFPGINA  P N +Q LW        GS P +                   
Sbjct: 388  SPPKKKMTVEFPGINAPIPENGDQWLW--------GSTPPQSSGRHHSLD---------- 429

Query: 721  XXWSEDHRDNRLPSSDTCGYYSPRYSPYG---QYPALNRSLSDRERGTPLPDKNSANPFT 891
               S D  D   P +D   +YSPRY  +      P++ RS SDR            +P  
Sbjct: 430  ---SRDFHDRGPPGAD---HYSPRYHSHDFGPLRPSIGRSHSDR---------GWRSPPR 474

Query: 892  YXXXXXXXGTTRQSSYHSPTTSGEHRKNYSSYNGITSPSVSSQQARDRHDHHYRNHSR 1065
            Y       G     SY     S +H  +YSS + ++S   S  + RDRHD  + +H R
Sbjct: 475  YDNPPADDGAWTPHSY----PSRQHLGHYSSSSEMSSRH-SRDKDRDRHDSRHYHHRR 527


>dbj|BAD46509.1| proline-rich spliceosome-associated protein-like [Oryza sativa
            Japonica Group]
          Length = 646

 Score =  226 bits (576), Expect = 1e-56
 Identities = 135/344 (39%), Positives = 176/344 (51%)
 Frame = +1

Query: 37   IQLENESVPLYDRGYTLGSTSVDGSTNSNWIETPDTSRCFNCGSYSHMLRECPRPRNRFA 216
            + L+++SVPLYDR +TLGST +   +N+      D SRCFNCGSYSH L+ECP+PR+  A
Sbjct: 346  VVLDDDSVPLYDREFTLGSTPLGDPSNTESRADKDDSRCFNCGSYSHALKECPKPRDNAA 405

Query: 217  ISNARRLHGSKRNQPSGPRVQIRYYQKSSGKIDDIKPGVLGTEAKESLGIRESDPPPWLH 396
            I+NAR+ H  KRNQ +  R Q RYYQK+ GK DD++PG+LG E +E LGI E+DPPPWLH
Sbjct: 406  INNARKQHNMKRNQSNVNRGQNRYYQKTPGKFDDLRPGILGPETRECLGIGENDPPPWLH 465

Query: 397  RTQEPGHPPGYLEGAEDEDQPSGITIFSXXXXXXXXXXXXXXXXXXXXXXPLRKMAAEFP 576
            R +E G+PPGYL+  +DED+PSGITIF                       P +K   EFP
Sbjct: 466  RMRELGYPPGYLDVVDDEDKPSGITIFG-DEDPKEEYEEGELPDQGEPSPPRKKKTVEFP 524

Query: 577  GINASSPANANQRLWAVHSGGFPGSYPSKXXXXXXXXXXXXXXXXXXXXXWSEDHRDNRL 756
            GIN   P N ++ LW      +   Y S                       S + RD   
Sbjct: 525  GINGPIPENGDRWLWDSTPPQYSERYHSSD---------------------SREERDRGP 563

Query: 757  PSSDTCGYYSPRYSPYGQYPALNRSLSDRERGTPLPDKNSANPFTYXXXXXXXGTTRQSS 936
            P +D       RYS Y  Y   +   +    G   PD+   +   Y       G     +
Sbjct: 564  PGAD-------RYSRYHSY---DYGPASPSHGRSHPDRGWRSSSGYENLPADDGAWTPHA 613

Query: 937  YHSPTTSGEHRKNYSSYNGITSPSVSSQQARDRHDHHYRNHSRR 1068
            Y    +S ++   YS     TS   SS+ +RDRHD HY  H RR
Sbjct: 614  Y----SSRQYSSQYS-----TSSETSSRHSRDRHDRHY--HHRR 646


>ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera]
          Length = 575

 Score =  224 bits (570), Expect = 6e-56
 Identities = 147/379 (38%), Positives = 200/379 (52%), Gaps = 23/379 (6%)
 Frame = +1

Query: 1    LDNKRRKEEIND-IQLENESVPLYDRGYTLGSTSVDGSTNSNW-IETPDTSRCFNCGSYS 174
            +DN+ RK++  + I L+ +SVPLYDRG+ LG  S DG +     +E  D SRCFNCGSY+
Sbjct: 214  VDNQTRKQQDKEFISLDGDSVPLYDRGFALGLVSEDGQSKPEGALEIIDASRCFNCGSYN 273

Query: 175  HMLRECPRPRNRFAISNARRLHGSKRNQPSGPRVQIRYYQKS-SGKIDDIKPGVLGTEAK 351
            H ++ECP+PR+  A++NAR+ H S+RNQ  G R   RYYQ S  G+ D ++PG LG E +
Sbjct: 274  HSMKECPKPRDNVAVNNARKQHKSRRNQNPGSRNPTRYYQNSPGGRYDGLRPGALGVETR 333

Query: 352  ESLGIRESDPPPWLHRTQEPGHPPGYLEGAEDEDQPSGITIFSXXXXXXXXXXXXXXXXX 531
            E LG+ E DPPPWL+R +E G+PPGYL+  E+E+QPSGITI++                 
Sbjct: 334  ELLGLGELDPPPWLNRMREMGYPPGYLD-PEEEEQPSGITIYA--DEEVKDEQEDGEILE 390

Query: 532  XXXXXPLRKMAAEFPGINASSPANANQRLWAVHSGGFPGSYPSKXXXXXXXXXXXXXXXX 711
                 P RKM+ EFPGINA  P NA++R WA       GS P +                
Sbjct: 391  TEYLEPQRKMSVEFPGINAPIPKNADERRWAA------GSRPHR---RLNHSYEPSSRRN 441

Query: 712  XXXXXWSEDHRDNRLPSSD-----TCGYYSPRY----SPYGQY-----------PALNRS 831
                 WS D+RD+    SD         Y PR+    S Y  Y           P   RS
Sbjct: 442  SHEQRWSRDYRDDGPCDSDMEISPPRSSYPPRHGGIDSSYTSYSTRGNIPRPRSPNFGRS 501

Query: 832  LSDRERGTPLPDKNSANPFTYXXXXXXXGTTRQSSYHSPTTSGEHRKNYSSYNGITSPSV 1011
            LSDR   + L  ++S    +Y        ++R S ++  + S E+  +   +NG +S   
Sbjct: 502  LSDRGGRSSLVHEDSLGYNSYSSLSYSSSSSRLSPHNYGSASYENNID-DRWNGSSS--- 557

Query: 1012 SSQQARDRHDHHYRNHSRR 1068
             S + R RHD H R HSRR
Sbjct: 558  WSNKDRHRHDEH-RYHSRR 575


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  219 bits (557), Expect = 2e-54
 Identities = 137/356 (38%), Positives = 192/356 (53%), Gaps = 4/356 (1%)
 Frame = +1

Query: 1    LDNKRRKEEIND-IQLENESVPLYDRGYTLGSTSVDGSTNSNW-IETPDTSRCFNCGSYS 174
            +DN+ RK++  + I L+ +SVPLYDRG+ LG  S DG +     +E  D SRCFNCGSY+
Sbjct: 804  VDNQTRKQQDKEFISLDGDSVPLYDRGFALGLVSEDGQSKPEGALEIIDASRCFNCGSYN 863

Query: 175  HMLRECPRPRNRFAISNARRLHGSKRNQPSGPRVQIRYYQKS-SGKIDDIKPGVLGTEAK 351
            H ++ECP+PR+  A++NAR+ H S+RNQ  G R   RYYQ S  G+ D ++PG LG E +
Sbjct: 864  HSMKECPKPRDNVAVNNARKQHKSRRNQNPGSRNPTRYYQNSPGGRYDGLRPGALGVETR 923

Query: 352  ESLGIRESDPPPWLHRTQEPGHPPGYLEGAEDEDQPSGITIFSXXXXXXXXXXXXXXXXX 531
            E LG+ E DPPPWL+R +E G+PPGYL+  E+E+QPSGITI++                 
Sbjct: 924  ELLGLGELDPPPWLNRMREMGYPPGYLD-PEEEEQPSGITIYA--DEEVKDEQEDGEILE 980

Query: 532  XXXXXPLRKMAAEFPGINASSPANANQRLWAVHSGGFPGSYPSKXXXXXXXXXXXXXXXX 711
                 P RKM+ EFPGINA  P NA++R WA       GS P +                
Sbjct: 981  TEYLEPQRKMSVEFPGINAPIPKNADERRWAA------GSRPHRRLNHSYEPSSRRN--- 1031

Query: 712  XXXXXWSEDHRDNRLPSSDTCGYYSPRYS-PYGQYPALNRSLSDRERGTPLPDKNSANPF 888
                  S + R   + SS T   YS R + P  + P   RSLSDR   + L  ++S    
Sbjct: 1032 ------SHEQRHGGIDSSYTS--YSTRGNIPRPRSPNFGRSLSDRGGRSSLVHEDSLGYN 1083

Query: 889  TYXXXXXXXGTTRQSSYHSPTTSGEHRKNYSSYNGITSPSVSSQQARDRHDHHYRN 1056
            +Y        ++R S ++  + S E+  +   +NG +S S   +   D H +H  N
Sbjct: 1084 SYSSLSYSSSSSRLSPHNYGSASYENNID-DRWNGSSSWSNKDRHRHDEHRYHKNN 1138


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