BLASTX nr result

ID: Dioscorea21_contig00015446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015446
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   279   4e-73
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              279   4e-73
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   268   1e-69
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...   239   6e-61
ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|2...   229   7e-58

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  279 bits (714), Expect = 4e-73
 Identities = 138/219 (63%), Positives = 170/219 (77%)
 Frame = +3

Query: 60  PRLPSGVLCGLRDGPRKSLWRGRILSTEAIQAVQXXXXXXXXXXXXXDQVFQSRIGRLLK 239
           P+ P  + CGLR GPRK LWR R+LSTEAIQ VQ             ++VF SR+ RLLK
Sbjct: 22  PQFPK-IACGLRGGPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKL--EEVFSSRVSRLLK 78

Query: 240 ADLISVLAELRRQHEWDLALQVFGFIRKEVWYKPDLSLYSDMIMMFGKKKMIETAEQLFS 419
           +DL+  LAEL+RQ E DL L+VF FIRKEVWYKPDLSLYSDMIM+ GKKK+IE AE LFS
Sbjct: 79  SDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFS 138

Query: 420 EIEKEGIKPDTRAYTEMIGAFLRVGMVEKAMDLYKSMKEEGCNPDKLTLVILIRNLEKAG 599
           E++KEG++PDTR YTEMIGA+L+VGM EKAM++Y  MK  GC PDKLTL ILIRNLE AG
Sbjct: 139 ELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAG 198

Query: 600 AQDLACSVRRDCEKYIDEPEKFLREVDTKFPKRRSFKVV 716
            ++LA  V+++CE+Y+D P+KFL E++ K+PKRRS  +V
Sbjct: 199 EEELAAGVKKECEEYVDYPKKFLEEIEKKYPKRRSVNLV 237


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  279 bits (714), Expect = 4e-73
 Identities = 138/219 (63%), Positives = 170/219 (77%)
 Frame = +3

Query: 60  PRLPSGVLCGLRDGPRKSLWRGRILSTEAIQAVQXXXXXXXXXXXXXDQVFQSRIGRLLK 239
           P+ P  + CGLR GPRK LWR R+LSTEAIQ VQ             ++VF SR+ RLLK
Sbjct: 27  PQFPK-IACGLRGGPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKL--EEVFSSRVSRLLK 83

Query: 240 ADLISVLAELRRQHEWDLALQVFGFIRKEVWYKPDLSLYSDMIMMFGKKKMIETAEQLFS 419
           +DL+  LAEL+RQ E DL L+VF FIRKEVWYKPDLSLYSDMIM+ GKKK+IE AE LFS
Sbjct: 84  SDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFS 143

Query: 420 EIEKEGIKPDTRAYTEMIGAFLRVGMVEKAMDLYKSMKEEGCNPDKLTLVILIRNLEKAG 599
           E++KEG++PDTR YTEMIGA+L+VGM EKAM++Y  MK  GC PDKLTL ILIRNLE AG
Sbjct: 144 ELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAG 203

Query: 600 AQDLACSVRRDCEKYIDEPEKFLREVDTKFPKRRSFKVV 716
            ++LA  V+++CE+Y+D P+KFL E++ K+PKRRS  +V
Sbjct: 204 EEELAAGVKKECEEYVDYPKKFLEEIEKKYPKRRSVNLV 242


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  268 bits (684), Expect = 1e-69
 Identities = 132/210 (62%), Positives = 163/210 (77%)
 Frame = +3

Query: 60  PRLPSGVLCGLRDGPRKSLWRGRILSTEAIQAVQXXXXXXXXXXXXXDQVFQSRIGRLLK 239
           P+ P  + CGLR GPRK LWR R+LSTEAIQ VQ             ++VF SR+ RLLK
Sbjct: 22  PQFPK-IACGLRGGPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKL--EEVFSSRVSRLLK 78

Query: 240 ADLISVLAELRRQHEWDLALQVFGFIRKEVWYKPDLSLYSDMIMMFGKKKMIETAEQLFS 419
           +DL+  LAEL+RQ E DL L+VF FIRKEVWYKPDLSLYSDMIM+ GKKK+IE AE LFS
Sbjct: 79  SDLLDTLAELQRQGELDLTLKVFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFS 138

Query: 420 EIEKEGIKPDTRAYTEMIGAFLRVGMVEKAMDLYKSMKEEGCNPDKLTLVILIRNLEKAG 599
           E++KEG++PDTR YTEMIGA+L+VGM EKAM++Y  MK  GC PDKLTL ILIRNLE AG
Sbjct: 139 ELKKEGLEPDTRVYTEMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAG 198

Query: 600 AQDLACSVRRDCEKYIDEPEKFLREVDTKF 689
            ++LA  V+++CE+Y+D P+KFL E++ K+
Sbjct: 199 EEELAAGVKKECEEYVDYPKKFLEEIEKKY 228


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score =  239 bits (609), Expect = 6e-61
 Identities = 123/220 (55%), Positives = 153/220 (69%)
 Frame = +3

Query: 27  PKAPTFCHGFHPRLPSGVLCGLRDGPRKSLWRGRILSTEAIQAVQXXXXXXXXXXXXXDQ 206
           PK P F   F       V C LR GPRK LWR + +STEAIQA+Q              Q
Sbjct: 20  PKTPNFKTSF-------VTCSLRGGPRKPLWRSKRVSTEAIQAIQSLKLAKSSNPRLH-Q 71

Query: 207 VFQSRIGRLLKADLISVLAELRRQHEWDLALQVFGFIRKEVWYKPDLSLYSDMIMMFGKK 386
           VF +++ RLLK DL+ VL  L++Q+E DLAL+VF F++KE+WYKPDL+LY  MI M GK 
Sbjct: 72  VFNTKLSRLLKTDLLDVLEILQKQNELDLALKVFEFVQKEIWYKPDLTLYYGMIEMLGKN 131

Query: 387 KMIETAEQLFSEIEKEGIKPDTRAYTEMIGAFLRVGMVEKAMDLYKSMKEEGCNPDKLTL 566
           KM E AE  FS++EKEG+KPDTRA+ EMIGA+L+VG  EKAM++Y  MKE GC PDKLT 
Sbjct: 132 KMTEMAEGYFSKLEKEGLKPDTRAFNEMIGAYLKVGTTEKAMEMYGRMKESGCVPDKLTF 191

Query: 567 VILIRNLEKAGAQDLACSVRRDCEKYIDEPEKFLREVDTK 686
           VILIRNLE+AG  DL   ++++C  Y+D PEKFL EV+ K
Sbjct: 192 VILIRNLEEAGRNDLVDIIKKECGDYMDYPEKFLEEVERK 231


>ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|222852675|gb|EEE90222.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  229 bits (583), Expect = 7e-58
 Identities = 118/220 (53%), Positives = 154/220 (70%), Gaps = 8/220 (3%)
 Frame = +3

Query: 51  GFH-----PRLP--SGVLCGLRDGPRKSLWRGRILSTEAIQAVQXXXXXXXXXXXXXDQV 209
           GFH     P LP  S + C LR  PR  LWR + LSTEAIQ +Q             ++V
Sbjct: 12  GFHKTLQKPHLPRSSVITCSLRGKPRPPLWRAKRLSTEAIQVIQSLKLARSSTPRL-EEV 70

Query: 210 FQSRIGRLLKADLISVLAELRRQHEWDLALQVFGFIRKEVWYKPDLSLYSDMIMMFGKKK 389
           F S++ RLLK DL+  LA L+ Q+E DLAL+VF F+RKEVWYKPD+ LY  MI M G+ K
Sbjct: 71  FNSKLSRLLKTDLLDTLAVLQNQNELDLALKVFEFVRKEVWYKPDILLYHAMIQMVGRNK 130

Query: 390 MIETAEQLFSEIEKE-GIKPDTRAYTEMIGAFLRVGMVEKAMDLYKSMKEEGCNPDKLTL 566
           M+E AE+ F ++EKE G+KPDTRA+TEMIGA+L+VGM++KAM+ Y+ MK  GC+PDKLT 
Sbjct: 131 MVEMAEEFFGKLEKEEGLKPDTRAFTEMIGAYLQVGMIDKAMETYERMKASGCDPDKLTF 190

Query: 567 VILIRNLEKAGAQDLACSVRRDCEKYIDEPEKFLREVDTK 686
            ILIRNLE AG ++L   ++++C  Y+D P+KFL EV+ K
Sbjct: 191 RILIRNLEDAGKEELVDRIKKECGDYMDYPKKFLEEVERK 230


Top