BLASTX nr result

ID: Dioscorea21_contig00015429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015429
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19138.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002306583.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_003615006.1| Xylan 1 4-beta-xylosidase [Medicago truncatu...   114   8e-24
ref|XP_003615003.1| Xylan 1 4-beta-xylosidase [Medicago truncatu...   114   8e-24
ref|XP_003592512.1| Xylosidase [Medicago truncatula] gi|35548156...   114   8e-24

>emb|CBI19138.3| unnamed protein product [Vitis vinifera]
          Length = 1411

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/119 (49%), Positives = 67/119 (56%)
 Frame = +1

Query: 1    NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQGDSFNNKKGGXXXXXXXXXXXXXX 180
            NIN+FRDPRWGRGQETPGEDP    +YAVSYVRG+QGD+F   K                
Sbjct: 826  NINIFRDPRWGRGQETPGEDPVVAGKYAVSYVRGLQGDTFEGGKVDV------------- 872

Query: 181  XXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQDL 357
                                    L+ SACCKH+TAYDLDNW  + RYTFDA+VT QDL
Sbjct: 873  ------------------------LQASACCKHFTAYDLDNWTSIDRYTFDARVTMQDL 907



 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/119 (46%), Positives = 64/119 (53%)
 Frame = +1

Query: 1   NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQGDSFNNKKGGXXXXXXXXXXXXXX 180
           NIN+FRDPRWGRGQETPGEDP     YAVSYVRG+QGD     K                
Sbjct: 158 NINIFRDPRWGRGQETPGEDPLVTGSYAVSYVRGVQGDCLRGLK---------------- 201

Query: 181 XXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQDL 357
                                   L+ SACCKH+TAYDLD+W+ + R+ FDA+VT QDL
Sbjct: 202 --------------------RCGELQASACCKHFTAYDLDDWKGIDRFKFDARVTMQDL 240


>ref|XP_002306583.1| predicted protein [Populus trichocarpa] gi|222856032|gb|EEE93579.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/119 (51%), Positives = 67/119 (56%)
 Frame = +1

Query: 1   NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQGDSFNNKKGGXXXXXXXXXXXXXX 180
           NIN+FRDPRWGRGQETPGEDP    +YAVSYVRG+QGDSF   KGG              
Sbjct: 157 NINIFRDPRWGRGQETPGEDPLMTGKYAVSYVRGLQGDSF---KGGEIKGP--------- 204

Query: 181 XXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQDL 357
                                   L+ SACCKH+TAYDL+NW    RY FDA VTAQDL
Sbjct: 205 ------------------------LQASACCKHFTAYDLENWNGTSRYVFDAYVTAQDL 239


>ref|XP_003615006.1| Xylan 1 4-beta-xylosidase [Medicago truncatula]
           gi|355516341|gb|AES97964.1| Xylan 1 4-beta-xylosidase
           [Medicago truncatula]
          Length = 685

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/121 (51%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
 Frame = +1

Query: 1   NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQGDSFNNKK--GGXXXXXXXXXXXX 174
           NIN+FRDPRWGRGQET GEDP   S+Y VSYVRG+QGDSF   K  GG            
Sbjct: 59  NINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGR----------- 107

Query: 175 XXXXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQD 354
                                     LK SACCKH+TAYDL+NW+ V RY FDAKVT QD
Sbjct: 108 --------------------------LKASACCKHFTAYDLENWKGVNRYVFDAKVTLQD 141

Query: 355 L 357
           L
Sbjct: 142 L 142


>ref|XP_003615003.1| Xylan 1 4-beta-xylosidase [Medicago truncatula]
           gi|355516338|gb|AES97961.1| Xylan 1 4-beta-xylosidase
           [Medicago truncatula]
          Length = 780

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/121 (51%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
 Frame = +1

Query: 1   NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQGDSFNNKK--GGXXXXXXXXXXXX 174
           NIN+FRDPRWGRGQET GEDP   S+Y VSYVRG+QGDSF   K  GG            
Sbjct: 163 NINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGR----------- 211

Query: 175 XXXXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQD 354
                                     LK SACCKH+TAYDL+NW+ V RY FDAKVT QD
Sbjct: 212 --------------------------LKASACCKHFTAYDLENWKGVNRYVFDAKVTLQD 245

Query: 355 L 357
           L
Sbjct: 246 L 246


>ref|XP_003592512.1| Xylosidase [Medicago truncatula] gi|355481560|gb|AES62763.1|
           Xylosidase [Medicago truncatula]
          Length = 781

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/121 (51%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +1

Query: 1   NINVFRDPRWGRGQETPGEDPETVSRYAVSYVRGMQ--GDSFNNKKGGXXXXXXXXXXXX 174
           N+NVFRDPRWGRGQETPGEDP  VSRYAV+YVRG+Q  GD                    
Sbjct: 152 NVNVFRDPRWGRGQETPGEDPLVVSRYAVNYVRGLQEVGDE------------------- 192

Query: 175 XXXXXXXXXXXXXXXXXXTASSSSTGLKVSACCKHYTAYDLDNWEKVVRYTFDAKVTAQD 354
                              AS+    LKVS+CCKHYTAYD+DNW+ V R+ FDAKVT QD
Sbjct: 193 -------------------ASAKGDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQD 233

Query: 355 L 357
           L
Sbjct: 234 L 234


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