BLASTX nr result

ID: Dioscorea21_contig00015407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015407
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   164   5e-39
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...   162   3e-38
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indi...   149   3e-34
ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/118 (71%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 361 MSSGRYMAYXXXXXXXXXXH-LAGIRSASSALTDQEKYLSELLGERHKLSPFTPVLPHAY 185
           MSSGRYMAY            +AG+RSA+SAL +QEKYLSELL ERHKLSPF PVLPH+Y
Sbjct: 1   MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60

Query: 184 RLLNQEILRVTTLLGNASLLDQSGLEQGSPLNTGGLFANGAADLNGWASTFQQERLGL 11
           RLLNQEILRVTTLLGNAS+LDQSGLE  SPL +GG+F+NG A++NGWAS FQ E  GL
Sbjct: 61  RLLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGL 118


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/116 (70%), Positives = 92/116 (79%)
 Frame = -3

Query: 352 GRYMAYXXXXXXXXXXHLAGIRSASSALTDQEKYLSELLGERHKLSPFTPVLPHAYRLLN 173
           GR+MAY          HL+G+RSASSAL +QEKYLSELL ERHKLSPF PVLPH YRLL+
Sbjct: 15  GRFMAYSPSPSAPHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLLS 74

Query: 172 QEILRVTTLLGNASLLDQSGLEQGSPLNTGGLFANGAADLNGWASTFQQERLGLLQ 5
           QEILRVTTLLGNAS+L QSGLE  SPL +GG+F+NG AD NGWAS FQ E  GL+Q
Sbjct: 75  QEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWASRFQSEMSGLIQ 130


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  152 bits (384), Expect = 3e-35
 Identities = 81/122 (66%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
 Frame = -3

Query: 361 MSSGRYMAYXXXXXXXXXXHLAGIRS--ASSALT-DQEKYLSELLGERHKLSPFTPVLPH 191
           + +GR+MAY          H++G+RS  ASSAL  +QEKYLSELL ERHK+SPF PVLP+
Sbjct: 11  VGAGRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPN 70

Query: 190 AYRLLNQEILRVTTLLGNASLLDQSGLEQGSPLNTGGLFANGAADLNGWASTFQQERLGL 11
            YRLLNQEILRVTTLLGNAS+L QSGLE  SPL +GG+F+NGAAD NGWAS FQ E  G+
Sbjct: 71  TYRLLNQEILRVTTLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGI 130

Query: 10  LQ 5
           LQ
Sbjct: 131 LQ 132


>gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica Group]
           gi|215769394|dbj|BAH01623.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 286

 Score =  149 bits (375), Expect = 3e-34
 Identities = 78/115 (67%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
 Frame = -3

Query: 361 MSSGRYMAYXXXXXXXXXXH-LAGIRSASSALTDQEKYLSELLGERHKLSPFTPVLPHAY 185
           M+SGRYMAY            + G+R+ASSA+ DQEKYL+ELL ERHKLSPF PVLP++ 
Sbjct: 1   MASGRYMAYSPSPSTTPHSPRIPGLRAASSAVADQEKYLAELLAERHKLSPFIPVLPNSV 60

Query: 184 RLLNQEILRVTTLLGNASLLDQSGLEQGSPLNTGGLFANG-AADLNGWASTFQQE 23
           RLLNQEILRV+TLL NASLL+QSGLE GSPL TGGL++NG AAD+NGW S FQ E
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAAADMNGWTSAFQSE 115


>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  148 bits (374), Expect = 4e-34
 Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
 Frame = -3

Query: 361 MSSGRYMAYXXXXXXXXXXHLAGIRS--ASSALT-DQEKYLSELLGERHKLSPFTPVLPH 191
           + + R+MAY          H++G+RS  ASSAL  +QEKYLSELL ERHK+ PF PVLP+
Sbjct: 10  VGASRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKIIPFMPVLPN 69

Query: 190 AYRLLNQEILRVTTLLGNASLLDQSGLEQGSPLNTGGLFANGAADLNGWASTFQQERLGL 11
            YRLLNQEILRVTTLLGNAS+L QSGLE  SPL++GG+F+NGAAD NGWAS FQ E  G+
Sbjct: 70  IYRLLNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGM 129

Query: 10  LQ 5
           LQ
Sbjct: 130 LQ 131


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