BLASTX nr result

ID: Dioscorea21_contig00015402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015402
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   114   4e-30
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              114   4e-30
ref|XP_002457814.1| hypothetical protein SORBIDRAFT_03g014130 [S...   116   6e-30
gb|AFW80747.1| hypothetical protein ZEAMMB73_402927 [Zea mays]        116   7e-30
gb|AAX21200.1| putative protein [Phormium cookianum]                  116   8e-30

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  114 bits (284), Expect(2) = 4e-30
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = -3

Query: 296  VMLKQSRILFMDEATASVDSQTDAVIQKIIREDFASCTIFSIAHRIPTVMDCDRVLVIDA 117
            VMLK+SRILF+DEATASVDSQTDAVIQ+IIREDFA+CTI SIAHRIPTVMDCDRVLVIDA
Sbjct: 1417 VMLKRSRILFLDEATASVDSQTDAVIQRIIREDFANCTIISIAHRIPTVMDCDRVLVIDA 1476

Query: 116  GYA 108
            G A
Sbjct: 1477 GRA 1479



 Score = 42.4 bits (98), Expect(2) = 4e-30
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -2

Query: 108  EPSKLLELNSLFGALVQEYANRSA 37
            +PS+LLE +SLFGALVQEYANRSA
Sbjct: 1484 KPSRLLERHSLFGALVQEYANRSA 1507


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  114 bits (284), Expect(2) = 4e-30
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = -3

Query: 296  VMLKQSRILFMDEATASVDSQTDAVIQKIIREDFASCTIFSIAHRIPTVMDCDRVLVIDA 117
            VMLK+SRILF+DEATASVDSQTDAVIQ+IIREDFA+CTI SIAHRIPTVMDCDRVLVIDA
Sbjct: 987  VMLKRSRILFLDEATASVDSQTDAVIQRIIREDFANCTIISIAHRIPTVMDCDRVLVIDA 1046

Query: 116  GYA 108
            G A
Sbjct: 1047 GRA 1049



 Score = 42.4 bits (98), Expect(2) = 4e-30
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -2

Query: 108  EPSKLLELNSLFGALVQEYANRSA 37
            +PS+LLE +SLFGALVQEYANRSA
Sbjct: 1054 KPSRLLERHSLFGALVQEYANRSA 1077


>ref|XP_002457814.1| hypothetical protein SORBIDRAFT_03g014130 [Sorghum bicolor]
           gi|241929789|gb|EES02934.1| hypothetical protein
           SORBIDRAFT_03g014130 [Sorghum bicolor]
          Length = 779

 Score =  116 bits (291), Expect(2) = 6e-30
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = -3

Query: 296 VMLKQSRILFMDEATASVDSQTDAVIQKIIREDFASCTIFSIAHRIPTVMDCDRVLVIDA 117
           VMLK+SRILFMDEATASVDSQTDAVIQKIIREDFA+CTI SIAHRIPTVMDCDRVLVIDA
Sbjct: 687 VMLKRSRILFMDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDA 746

Query: 116 GYA 108
           G A
Sbjct: 747 GLA 749



 Score = 39.3 bits (90), Expect(2) = 6e-30
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 105 PSKLLELNSLFGALVQEYANRSAD 34
           P+ L+E  SLFGALVQEYANRS+D
Sbjct: 755 PANLIERPSLFGALVQEYANRSSD 778


>gb|AFW80747.1| hypothetical protein ZEAMMB73_402927 [Zea mays]
          Length = 1509

 Score =  116 bits (290), Expect(2) = 7e-30
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = -3

Query: 296  VMLKQSRILFMDEATASVDSQTDAVIQKIIREDFASCTIFSIAHRIPTVMDCDRVLVIDA 117
            VMLK SRILFMDEATASVDSQTDAVIQKIIREDFA+CTI SIAHRIPTVMDCDRVLVIDA
Sbjct: 1417 VMLKHSRILFMDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDA 1476

Query: 116  GYA 108
            G A
Sbjct: 1477 GLA 1479



 Score = 39.3 bits (90), Expect(2) = 7e-30
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 105  PSKLLELNSLFGALVQEYANRSAD 34
            P+ L+E  SLFGALVQEYANRS+D
Sbjct: 1485 PANLIERPSLFGALVQEYANRSSD 1508


>gb|AAX21200.1| putative protein [Phormium cookianum]
          Length = 94

 Score =  116 bits (291), Expect(2) = 8e-30
 Identities = 59/63 (93%), Positives = 61/63 (96%)
 Frame = -3

Query: 296 VMLKQSRILFMDEATASVDSQTDAVIQKIIREDFASCTIFSIAHRIPTVMDCDRVLVIDA 117
           VMLK+SRILFMDEATASVDSQTDAVIQKIIREDFA+CTI SIAHRIPTVMDCDRVLVIDA
Sbjct: 2   VMLKKSRILFMDEATASVDSQTDAVIQKIIREDFATCTIISIAHRIPTVMDCDRVLVIDA 61

Query: 116 GYA 108
           G A
Sbjct: 62  GLA 64



 Score = 38.9 bits (89), Expect(2) = 8e-30
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -2

Query: 108 EPSKLLELNSLFGALVQEYANRSAD 34
           +PS L+E  SLFGALVQEY NRS+D
Sbjct: 69  KPSNLIERPSLFGALVQEYLNRSSD 93


Top