BLASTX nr result
ID: Dioscorea21_contig00015394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00015394
(1456 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ... 328 e-111
gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indi... 320 e-108
ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group] g... 319 e-108
gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japo... 319 e-108
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic... 316 e-103
>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
gi|296089196|emb|CBI38899.3| unnamed protein product
[Vitis vinifera]
Length = 346
Score = 328 bits (840), Expect(2) = e-111
Identities = 162/223 (72%), Positives = 190/223 (85%), Gaps = 3/223 (1%)
Frame = -2
Query: 1047 IQLAINVQIPYDFGGLGGKAVYIDTEGSFMAERAYQIAEASILDTFDNFGCQLKEIPE-- 874
IQLA+NVQIP ++GGLGGKA+YIDTEGSFM ER+ QIAEA I D N K+
Sbjct: 124 IQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQSCQ 183
Query: 873 -KLKPESFLENIFYFRICSNTEQIALINYLEQFLVEHKDVKIVIIDSVTFHFRQDFDDLA 697
K +P+ FL+NIFYFR+CS TEQIA+INYL++F+ EHKDV +VIIDSVTFHFRQDFDDLA
Sbjct: 184 VKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFDDLA 243
Query: 696 LRTRVLGGMSLKLMNLAKKFSLSVVLMNQVTTKFTEGSFHLTLALGDSWSHSCTNRVILY 517
LRTR+L GM+LKLM LAKKFSL+VVL+NQVTTK TEGSF LTLALGDSWSHSCTNRVILY
Sbjct: 244 LRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILY 303
Query: 516 WNGNDRHAYLDKSPYLRPASVHFSVTGKGIRDATSQCKRVRMM 388
WNG++R+AY+DKSP LR AS +SVTGKGIR ATS+CKR+++M
Sbjct: 304 WNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346
Score = 102 bits (253), Expect(2) = e-111
Identities = 55/114 (48%), Positives = 72/114 (63%)
Frame = -1
Query: 1456 ASHRAKLLSAGYTTXXXXXXXXXXXXSRDLNVALQEAVDILKVSSESCRVEVQDGAVEFC 1277
AS R KL+SAGYT+ ++DL ++ EA++IL+V S+ R++ DG+
Sbjct: 10 ASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLDKPDGSHAIV 69
Query: 1276 KGAQTAWDMLSEEQALRHISTXXXXXXXXXXXXIHCKEVTEIGGVPGIGKTQLG 1115
GAQTAWDML EE++L+ I+T I CKEVTEIGGVPGIGKTQLG
Sbjct: 70 NGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLG 123
>gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indica Group]
Length = 349
Score = 320 bits (821), Expect(2) = e-108
Identities = 165/224 (73%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Frame = -2
Query: 1047 IQLAINVQIPYDFGGLGGKAVYIDTEGSFMAERAYQIAEASILDTFDNFGCQLKEIP--- 877
IQLAINVQIP ++GGLGGKAVYIDTEGSFM ER YQIAE I D + F + P
Sbjct: 126 IQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQ 185
Query: 876 EKLKPESFLENIFYFRICSNTEQIALINYLEQFLVEHKDVKIVIIDSVTFHFRQDFDDLA 697
EKLKPESFL +I+YFRICS TEQIA+INYLE+FL EHKDV+IVIIDSVTFHFRQDFDD+A
Sbjct: 186 EKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVTFHFRQDFDDMA 245
Query: 696 LRTRVLGGMSLKLMNLAKKFSLSVVLMNQVTTKFTEGSFHLTLALGDSWSHSCTNRVILY 517
LRTRVL G+SLKLM L+K ++L+VVL+NQVTTKFTEGSF LTLALGDSWSHSCTNR+ILY
Sbjct: 246 LRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRLILY 305
Query: 516 WNGNDRHAYLDKSPYLRPASVHFSVTGKGIRDA-TSQCKRVRMM 388
WNGN+R+ YLDKSP L AS ++VT KG+RDA S KRVR+M
Sbjct: 306 WNGNERYGYLDKSPSLPVASAPYAVTIKGVRDAVNSNSKRVRVM 349
Score = 101 bits (251), Expect(2) = e-108
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = -1
Query: 1453 SHRAKLLSAGYTTXXXXXXXXXXXXSRDLNVALQEAVDILKVSSESCRVEVQDG--AVEF 1280
SHRA LL+AGY++ +RDL++ + EA +ILKV+ + + + DG
Sbjct: 11 SHRANLLAAGYSSLAALSAASPPRLARDLSIEVHEAEEILKVAVGANKSKGADGPSTSSV 70
Query: 1279 CKGAQTAWDMLSEEQALRHISTXXXXXXXXXXXXIHCKEVTEIGGVPGIGKTQLG 1115
KGAQ AWDMLS+EQ+ RHI+T IHCKEVTEIGGVPG+GKTQLG
Sbjct: 71 LKGAQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLG 125
>ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|13161340|dbj|BAB32931.1| DNA repair protein radA
(radA)-like [Oryza sativa Japonica Group]
gi|20521295|dbj|BAB91810.1| DNA repair protein radA
(radA)-like [Oryza sativa Japonica Group]
gi|113532925|dbj|BAF05308.1| Os01g0578000 [Oryza sativa
Japonica Group] gi|215686387|dbj|BAG87648.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|343466352|gb|AEM43048.1| RAD51C-1 [Oryza sativa]
Length = 349
Score = 319 bits (818), Expect(2) = e-108
Identities = 164/224 (73%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Frame = -2
Query: 1047 IQLAINVQIPYDFGGLGGKAVYIDTEGSFMAERAYQIAEASILDTFDNFGCQLKEIP--- 877
IQLAINVQIP ++GGLGGKAVYIDTEGSFM ER YQIAE I D + F + P
Sbjct: 126 IQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQ 185
Query: 876 EKLKPESFLENIFYFRICSNTEQIALINYLEQFLVEHKDVKIVIIDSVTFHFRQDFDDLA 697
EKLKPESFL +I+YFRICS TEQIA+INYLE+FL EHKDV+IVIIDSVTFHFRQDFDD+A
Sbjct: 186 EKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVTFHFRQDFDDMA 245
Query: 696 LRTRVLGGMSLKLMNLAKKFSLSVVLMNQVTTKFTEGSFHLTLALGDSWSHSCTNRVILY 517
LRTRVL G+SLKLM L+K ++L+VVL+NQVTTKFTEGSF LTLALGDSWSHSCTNR+ILY
Sbjct: 246 LRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRLILY 305
Query: 516 WNGNDRHAYLDKSPYLRPASVHFSVTGKGIRDA-TSQCKRVRMM 388
WNGN+R+ +LDKSP L AS ++VT KG+RDA S KRVR+M
Sbjct: 306 WNGNERYGFLDKSPSLPVASAPYAVTVKGVRDAVNSNSKRVRVM 349
Score = 99.8 bits (247), Expect(2) = e-108
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = -1
Query: 1453 SHRAKLLSAGYTTXXXXXXXXXXXXSRDLNVALQEAVDILKVSSESCRVEVQDG--AVEF 1280
SHRA LL+AGY++ +RDL++ + EA +ILKV+ + + + DG
Sbjct: 11 SHRANLLAAGYSSLAALSAASPPRLARDLSIEVHEAEEILKVAVGANKSKGADGPSTSSV 70
Query: 1279 CKGAQTAWDMLSEEQALRHISTXXXXXXXXXXXXIHCKEVTEIGGVPGIGKTQLG 1115
KG Q AWDMLS+EQ+ RHI+T IHCKEVTEIGGVPG+GKTQLG
Sbjct: 71 LKGVQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLG 125
>gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japonica Group]
Length = 349
Score = 319 bits (818), Expect(2) = e-108
Identities = 164/224 (73%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Frame = -2
Query: 1047 IQLAINVQIPYDFGGLGGKAVYIDTEGSFMAERAYQIAEASILDTFDNFGCQLKEIP--- 877
IQLAINVQIP ++GGLGGKAVYIDTEGSFM ER YQIAE I D + F + P
Sbjct: 126 IQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQ 185
Query: 876 EKLKPESFLENIFYFRICSNTEQIALINYLEQFLVEHKDVKIVIIDSVTFHFRQDFDDLA 697
EKLKPESFL +I+YFRICS TEQIA+INYLE+FL EHKDV+IVIIDSVTFHFRQDFDD+A
Sbjct: 186 EKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVTFHFRQDFDDMA 245
Query: 696 LRTRVLGGMSLKLMNLAKKFSLSVVLMNQVTTKFTEGSFHLTLALGDSWSHSCTNRVILY 517
LRTRVL G+SLKLM L+K ++L+VVL+NQVTTKFTEGSF LTLALGDSWSHSCTNR+ILY
Sbjct: 246 LRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRLILY 305
Query: 516 WNGNDRHAYLDKSPYLRPASVHFSVTGKGIRDA-TSQCKRVRMM 388
WNGN+R+ +LDKSP L AS ++VT KG+RDA S KRVR+M
Sbjct: 306 WNGNERYGFLDKSPSLPVASAPYAVTVKGVRDAVNSNSKRVRVM 349
Score = 99.8 bits (247), Expect(2) = e-108
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = -1
Query: 1453 SHRAKLLSAGYTTXXXXXXXXXXXXSRDLNVALQEAVDILKVSSESCRVEVQDG--AVEF 1280
SHRA LL+AGY++ +RDL++ + EA +ILKV+ + + + DG
Sbjct: 11 SHRANLLAAGYSSLAAFSAASPPRLARDLSIEVHEAEEILKVAVGANKSKGADGPSTSSV 70
Query: 1279 CKGAQTAWDMLSEEQALRHISTXXXXXXXXXXXXIHCKEVTEIGGVPGIGKTQLG 1115
KG Q AWDMLS+EQ+ RHI+T IHCKEVTEIGGVPG+GKTQLG
Sbjct: 71 LKGVQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLG 125
>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|357477663|ref|XP_003609117.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
gi|355510139|gb|AES91281.1| DNA repair protein RAD51-like
protein [Medicago truncatula] gi|355510172|gb|AES91314.1|
DNA repair protein RAD51-like protein [Medicago
truncatula]
Length = 347
Score = 316 bits (809), Expect(2) = e-103
Identities = 155/223 (69%), Positives = 185/223 (82%), Gaps = 3/223 (1%)
Frame = -2
Query: 1047 IQLAINVQIPYDFGGLGGKAVYIDTEGSFMAERAYQIAEASILDTFD---NFGCQLKEIP 877
IQLA+NVQIP D+GGLGGKA+YIDTEGSFM ER QIAEA I D + +F +
Sbjct: 125 IQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFG 184
Query: 876 EKLKPESFLENIFYFRICSNTEQIALINYLEQFLVEHKDVKIVIIDSVTFHFRQDFDDLA 697
K+ P S LENIFYFR+CS TEQIAL+NYL++F+ EHKDVKI+IIDSVTFHFRQDFDD+A
Sbjct: 185 VKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFDDMA 244
Query: 696 LRTRVLGGMSLKLMNLAKKFSLSVVLMNQVTTKFTEGSFHLTLALGDSWSHSCTNRVILY 517
LRTR+LG MSLKLM LAK SL+VV++NQVTTK EGSF LTLALGDSWSHSCTNR+ILY
Sbjct: 245 LRTRLLGEMSLKLMKLAKNLSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILY 304
Query: 516 WNGNDRHAYLDKSPYLRPASVHFSVTGKGIRDATSQCKRVRMM 388
WNG++RHAY+DKSP L+ AS +SVT +GIR++TS KR++M+
Sbjct: 305 WNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 347
Score = 87.4 bits (215), Expect(2) = e-103
Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = -1
Query: 1456 ASHRAKLLSAGYTTXXXXXXXXXXXXSRDLNVALQEAVDILKVSSESCRVEVQDGA-VEF 1280
AS R KLL+AGYTT RD+ V+ EA++IL ++ S ++ G+
Sbjct: 10 ASKRGKLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLDKSSGSNTNV 69
Query: 1279 CKGAQTAWDMLSEEQALRHISTXXXXXXXXXXXXIHCKEVTEIGGVPGIGKTQLG 1115
G QTAWDML+EE+ I+T I+CKEVTEIGGVPGIGKTQ+G
Sbjct: 70 IDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIG 124