BLASTX nr result

ID: Dioscorea21_contig00015384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015384
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   210   9e-53
ref|XP_003564886.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   210   9e-53
dbj|BAJ96252.1| predicted protein [Hordeum vulgare subsp. vulgare]    210   9e-53
gb|ACR36132.1| unknown [Zea mays] gi|414877811|tpg|DAA54942.1| T...   209   2e-52
ref|NP_001150002.1| copine family protein [Zea mays] gi|19563599...   209   2e-52

>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  210 bits (535), Expect = 9e-53
 Identities = 104/119 (87%), Positives = 110/119 (92%)
 Frame = +2

Query: 2   GGQYHVLLIIADGQVTRSVDIESGQLSSQEQKTVDAIVKASQLPLSIILVGVGDGPWDMM 181
           GGQYHVLLIIADGQVTRSVD E G+LS QEQKTVDAIV AS+ PLSI+LVGVGDGPWDMM
Sbjct: 231 GGQYHVLLIIADGQVTRSVDTERGRLSPQEQKTVDAIVAASKYPLSIVLVGVGDGPWDMM 290

Query: 182 KEFDDNIPARSFDNFQFVNFTQIMSKNVPQTRKETEFALAALMEIPLQYRATLELGLLG 358
           KEFDDNIPAR FDNFQFVNFT IM+KN PQTRKETEFAL+ALMEIPLQY+ATLEL LLG
Sbjct: 291 KEFDDNIPARDFDNFQFVNFTNIMAKNAPQTRKETEFALSALMEIPLQYKATLELNLLG 349


>ref|XP_003564886.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Brachypodium
           distachyon]
          Length = 464

 Score =  210 bits (535), Expect = 9e-53
 Identities = 102/119 (85%), Positives = 114/119 (95%)
 Frame = +2

Query: 2   GGQYHVLLIIADGQVTRSVDIESGQLSSQEQKTVDAIVKASQLPLSIILVGVGDGPWDMM 181
           GGQYHVLLIIADGQVTRSVD  SGQLSSQEQKTVDAIV+AS+LPLSI+LVGVGDGPWDMM
Sbjct: 236 GGQYHVLLIIADGQVTRSVDTASGQLSSQEQKTVDAIVRASELPLSIVLVGVGDGPWDMM 295

Query: 182 KEFDDNIPARSFDNFQFVNFTQIMSKNVPQTRKETEFALAALMEIPLQYRATLELGLLG 358
           KEFDDNIPAR+FDNFQFVNF++IMSKN+PQ+RKE  FAL+ALMEIP QY+AT+ELG+LG
Sbjct: 296 KEFDDNIPARAFDNFQFVNFSEIMSKNMPQSRKEAAFALSALMEIPQQYKATVELGILG 354


>dbj|BAJ96252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score =  210 bits (535), Expect = 9e-53
 Identities = 102/119 (85%), Positives = 114/119 (95%)
 Frame = +2

Query: 2   GGQYHVLLIIADGQVTRSVDIESGQLSSQEQKTVDAIVKASQLPLSIILVGVGDGPWDMM 181
           GGQYHVLLIIADGQVTRSVD  SGQLSSQEQKTVDAIV+AS+LPLSI+LVGVGDGPWDMM
Sbjct: 240 GGQYHVLLIIADGQVTRSVDTASGQLSSQEQKTVDAIVRASELPLSIVLVGVGDGPWDMM 299

Query: 182 KEFDDNIPARSFDNFQFVNFTQIMSKNVPQTRKETEFALAALMEIPLQYRATLELGLLG 358
           KEFDDNIPAR+FDNFQFVNF++IMSKN+PQ+RKE  FAL+ALMEIP QY+AT+ELG+LG
Sbjct: 300 KEFDDNIPARAFDNFQFVNFSEIMSKNMPQSRKEAAFALSALMEIPQQYKATVELGILG 358


>gb|ACR36132.1| unknown [Zea mays] gi|414877811|tpg|DAA54942.1| TPA: copine family
           protein [Zea mays]
          Length = 541

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +2

Query: 2   GGQYHVLLIIADGQVTRSVDIESGQLSSQEQKTVDAIVKASQLPLSIILVGVGDGPWDMM 181
           GGQYHVL+IIADGQVTRSVD E GQLS+QEQ TVDAIV+ASQ PLSIILVGVGDGPWDMM
Sbjct: 310 GGQYHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASQFPLSIILVGVGDGPWDMM 369

Query: 182 KEFDDNIPARSFDNFQFVNFTQIMSKNVPQTRKETEFALAALMEIPLQYRATLELGLLGN 361
           KEFDDNIPARSFDNFQFVNFT IMSK + Q++KETEFAL+ALMEIPLQY+ATLELG+LG 
Sbjct: 370 KEFDDNIPARSFDNFQFVNFTAIMSKKISQSKKETEFALSALMEIPLQYKATLELGILGR 429

Query: 362 LV 367
            +
Sbjct: 430 RI 431


>ref|NP_001150002.1| copine family protein [Zea mays] gi|195635995|gb|ACG37466.1| copine
           family protein [Zea mays]
          Length = 541

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +2

Query: 2   GGQYHVLLIIADGQVTRSVDIESGQLSSQEQKTVDAIVKASQLPLSIILVGVGDGPWDMM 181
           GGQYHVL+IIADGQVTRSVD E GQLS+QEQ TVDAIV+ASQ PLSIILVGVGDGPWDMM
Sbjct: 310 GGQYHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASQFPLSIILVGVGDGPWDMM 369

Query: 182 KEFDDNIPARSFDNFQFVNFTQIMSKNVPQTRKETEFALAALMEIPLQYRATLELGLLGN 361
           KEFDDNIPARSFDNFQFVNFT IMSK + Q++KETEFAL+ALMEIPLQY+ATLELG+LG 
Sbjct: 370 KEFDDNIPARSFDNFQFVNFTAIMSKKISQSKKETEFALSALMEIPLQYKATLELGILGR 429

Query: 362 LV 367
            +
Sbjct: 430 RI 431


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