BLASTX nr result

ID: Dioscorea21_contig00015361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015361
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   138   5e-31
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   138   5e-31
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
emb|CBI16457.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1148

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/109 (55%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +3

Query: 27  LQSSAEP-SGIFEDMDQGSVFSGIPNDFVCPLTGHLFKDPVTLETGQTFEKAAIKEWFKQ 203
           ++SSA+   G  +  ++GS FS IP DF+CPLTG LF+DPVT+ETGQTFE+ AI+EWF Q
Sbjct: 649 MESSAKDLHGNCQYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQ 708

Query: 204 GKKTCPVTGRGLESLSIPVTDFVLKCVMDEWRLEHCRNLLIYATQISGS 350
           G + CPVTG+ LE L +P+T+F+LK V+D W+ E+CR+LL +A+++ GS
Sbjct: 709 GNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGS 757


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/109 (55%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +3

Query: 27  LQSSAEP-SGIFEDMDQGSVFSGIPNDFVCPLTGHLFKDPVTLETGQTFEKAAIKEWFKQ 203
           ++SSA+   G  +  ++GS FS IP DF+CPLTG LF+DPVT+ETGQTFE+ AI+EWF Q
Sbjct: 649 MESSAKDLHGNCQYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQ 708

Query: 204 GKKTCPVTGRGLESLSIPVTDFVLKCVMDEWRLEHCRNLLIYATQISGS 350
           G + CPVTG+ LE L +P+T+F+LK V+D W+ E+CR+LL +A+++ GS
Sbjct: 709 GNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGS 757


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
           predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = +3

Query: 48  SGIFEDMDQGSVFSGIPNDFVCPLTGHLFKDPVTLETGQTFEKAAIKEWFKQGKKTCPVT 227
           +G  E  D+GS+F  IP DFVCPLT  LF+DPVTLETGQTFE+ AI++WF QG +TCP+T
Sbjct: 672 NGSHESFDEGSIFESIPQDFVCPLTRQLFEDPVTLETGQTFEREAIRKWFNQGNRTCPLT 731

Query: 228 GRGLESLSIPVTDFVLKCVMDEWRLEHCRNLLIYATQI 341
           G+ LE  +IP+T+F+LK ++D W+LE C +LL +A+QI
Sbjct: 732 GKTLECPTIPLTNFILKRMIDSWKLERCNHLLSFASQI 769


>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  133 bits (335), Expect = 1e-29
 Identities = 56/91 (61%), Positives = 75/91 (82%)
 Frame = +3

Query: 78  SVFSGIPNDFVCPLTGHLFKDPVTLETGQTFEKAAIKEWFKQGKKTCPVTGRGLESLSIP 257
           S FS IP DF+CPLTG LF+DPVT+ETGQTFE+ AI+EWF QG + CPVTG+ LE L +P
Sbjct: 603 SFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKALEGLGVP 662

Query: 258 VTDFVLKCVMDEWRLEHCRNLLIYATQISGS 350
           +T+F+LK V+D W+ E+CR+LL +A+++ GS
Sbjct: 663 LTNFILKRVIDGWKSENCRHLLAFASKVEGS 693


>ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|222844917|gb|EEE82464.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/100 (56%), Positives = 76/100 (76%)
 Frame = +3

Query: 3   NSEMASSLLQSSAEPSGIFEDMDQGSVFSGIPNDFVCPLTGHLFKDPVTLETGQTFEKAA 182
           +S+ A +   SS  P+G  E  D+GS+F  IP+DF+CPLTG LF+DPVTLETGQTFE+ A
Sbjct: 658 HSKKAINADASSEGPNGSHEHFDEGSIFDSIPHDFICPLTGQLFEDPVTLETGQTFEREA 717

Query: 183 IKEWFKQGKKTCPVTGRGLESLSIPVTDFVLKCVMDEWRL 302
           I+EWF QG KTCPV+G+ L   ++P+T+ +LK V+D W+L
Sbjct: 718 IREWFDQGNKTCPVSGKTLACSTVPLTNSILKLVIDSWKL 757


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