BLASTX nr result

ID: Dioscorea21_contig00015347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015347
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH23795.1| putative auxin transport facilitator protein [Pi...   111   7e-23
ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier com...   109   3e-22
emb|CBI32786.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002322614.1| auxin efflux carrier component [Populus tric...   107   8e-22
gb|AAM54034.1|AF515435_1 PIN1-like auxin transport protein [Popu...   107   8e-22

>dbj|BAH23795.1| putative auxin transport facilitator protein [Pisum sativum]
          Length = 595

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/108 (61%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   FVWSSSASPVSEGGLHVFK-AGEFGAE-LNGVSHPSDHLAQKDGQPCGYDDEFSFRNRPI 176
           FVWSSSASPVSEGG+HVF+ AGE+G E LNGV+H      QKD +  G+ DEFSF NR +
Sbjct: 339 FVWSSSASPVSEGGIHVFRGAGEYGNEHLNGVAH------QKDYEEFGH-DEFSFGNRTV 391

Query: 177 SRAVNSFKKDKPSLSKIGSNSTAQLHHKTGSE-DLKPTSMPPASVMTR 317
           +  V+   KD P LSK+GS+ST +LH K GS+ + KPT+MPPASVMTR
Sbjct: 392 ANGVD---KDGPVLSKLGSSSTTELHPKDGSQVESKPTNMPPASVMTR 436


>ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           2 [Vitis vinifera]
          Length = 597

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/105 (57%), Positives = 75/105 (71%)
 Frame = +3

Query: 3   FVWSSSASPVSEGGLHVFKAGEFGAELNGVSHPSDHLAQKDGQPCGYDDEFSFRNRPISR 182
           FVWSSSASPVSEGG+HVF+ G++G EL GV H  D+   + GQ     DEFSF NR    
Sbjct: 345 FVWSSSASPVSEGGIHVFRGGDYGNELGGVPHTKDY--DEFGQ-----DEFSFGNR---A 394

Query: 183 AVNSFKKDKPSLSKIGSNSTAQLHHKTGSEDLKPTSMPPASVMTR 317
           +VN   ++ P++SK+GS+ST +LH KT  +  KPTSMPPASVMTR
Sbjct: 395 SVNGGDREGPTMSKLGSSSTTELHPKTAPQS-KPTSMPPASVMTR 438


>emb|CBI32786.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/105 (57%), Positives = 75/105 (71%)
 Frame = +3

Query: 3   FVWSSSASPVSEGGLHVFKAGEFGAELNGVSHPSDHLAQKDGQPCGYDDEFSFRNRPISR 182
           FVWSSSASPVSEGG+HVF+ G++G EL GV H  D+   + GQ     DEFSF NR    
Sbjct: 303 FVWSSSASPVSEGGIHVFRGGDYGNELGGVPHTKDY--DEFGQ-----DEFSFGNR---A 352

Query: 183 AVNSFKKDKPSLSKIGSNSTAQLHHKTGSEDLKPTSMPPASVMTR 317
           +VN   ++ P++SK+GS+ST +LH KT  +  KPTSMPPASVMTR
Sbjct: 353 SVNGGDREGPTMSKLGSSSTTELHPKTAPQS-KPTSMPPASVMTR 396


>ref|XP_002322614.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222867244|gb|EEF04375.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 588

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   FVWSSSASPVSEGGLHVFKAGEFGAELNGVSHPSDHLAQKDGQPCGYDDEFSFRNRPISR 182
           FVWSSSASPVSEGGLHVFK G++G +L GV+H  D+   + G+     DEFSF NRP   
Sbjct: 334 FVWSSSASPVSEGGLHVFKGGDYGNDLGGVAHHKDY--DEFGR-----DEFSFGNRP--- 383

Query: 183 AVNSFKKDKPSLSKIGSNSTAQLHHKTGSE-DLKPTSMPPASVMTR 317
             N   +D P LSK+GS+STA+LH K+ +  + KPT MPP SVMTR
Sbjct: 384 GPNGVDRDGPVLSKLGSSSTAELHPKSAANGEAKPTVMPPTSVMTR 429


>gb|AAM54034.1|AF515435_1 PIN1-like auxin transport protein [Populus tremula x Populus
           tremuloides]
          Length = 588

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   FVWSSSASPVSEGGLHVFKAGEFGAELNGVSHPSDHLAQKDGQPCGYDDEFSFRNRPISR 182
           FVWSSSASPVSEGGLHVFK G++G +L GV+H  D+   + G+     DEFSF NRP   
Sbjct: 334 FVWSSSASPVSEGGLHVFKGGDYGNDLGGVAHHKDY--DEFGR-----DEFSFGNRP--- 383

Query: 183 AVNSFKKDKPSLSKIGSNSTAQLHHKTGSE-DLKPTSMPPASVMTR 317
             N   +D P LSK+GS+STA+LH K+ +  + KPT MPP SVMTR
Sbjct: 384 GPNGVDRDGPVLSKLGSSSTAELHPKSAANGEAKPTVMPPTSVMTR 429


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