BLASTX nr result

ID: Dioscorea21_contig00015346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015346
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   342   4e-92
emb|CBI34215.3| unnamed protein product [Vitis vinifera]              342   4e-92
gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]        330   2e-88
gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]        330   2e-88
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   330   2e-88

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  342 bits (878), Expect = 4e-92
 Identities = 168/223 (75%), Positives = 176/223 (78%)
 Frame = -3

Query: 669 MGVPAFYRWLADRYPLSIADVIEEEPPRGAATVDASRPNPNGMEFDNLYLDMNGIIHPCF 490
           MGVPAFYRWLADRYPL++ DV+EEEP  G A +D SRPNPNGMEFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 489 HPDGRPPPTTYDDVFRSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSXXXXXXX 310
           HPDG+P PTTYDDVF+SIFDYIDHLF LVRPR+LLYMAIDGVAPRAKMNQQRS       
Sbjct: 61  HPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAK 120

Query: 309 XXXXXXXXXXXXXXXXXXEGRNLSISEKPETLDSNVITPGTGFMGALSVALQYYIHLRLN 130
                             EG+ LS  EKPET DSNVITPGT FM  LSVALQYYIH RLN
Sbjct: 121 DAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLN 180

Query: 129 NTPGWQSIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTR 1
             PGW S KVILSDSNVPGEGEHKIMSYIR QRNL GFNPNTR
Sbjct: 181 RNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTR 223


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  342 bits (878), Expect = 4e-92
 Identities = 168/223 (75%), Positives = 176/223 (78%)
 Frame = -3

Query: 669 MGVPAFYRWLADRYPLSIADVIEEEPPRGAATVDASRPNPNGMEFDNLYLDMNGIIHPCF 490
           MGVPAFYRWLADRYPL++ DV+EEEP  G A +D SRPNPNGMEFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPSEGGAEIDVSRPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 489 HPDGRPPPTTYDDVFRSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSXXXXXXX 310
           HPDG+P PTTYDDVF+SIFDYIDHLF LVRPR+LLYMAIDGVAPRAKMNQQRS       
Sbjct: 61  HPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAK 120

Query: 309 XXXXXXXXXXXXXXXXXXEGRNLSISEKPETLDSNVITPGTGFMGALSVALQYYIHLRLN 130
                             EG+ LS  EKPET DSNVITPGT FM  LSVALQYYIH RLN
Sbjct: 121 DAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLN 180

Query: 129 NTPGWQSIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTR 1
             PGW S KVILSDSNVPGEGEHKIMSYIR QRNL GFNPNTR
Sbjct: 181 RNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTR 223


>gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
          Length = 652

 Score =  330 bits (846), Expect = 2e-88
 Identities = 163/227 (71%), Positives = 177/227 (77%), Gaps = 4/227 (1%)
 Frame = -3

Query: 669 MGVPAFYRWLADRYPLSIADVIEEEP----PRGAATVDASRPNPNGMEFDNLYLDMNGII 502
           MGVPAFYRWLADRYPL+++D  EEEP    P     VD  RPNPNG+EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60

Query: 501 HPCFHPDGRPPPTTYDDVFRSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSXXX 322
           HPCFHP+GRP PTTYD+VF+SIFDYIDHLFGL+RPRKLLYMAIDGVAPRAKMNQQRS   
Sbjct: 61  HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120

Query: 321 XXXXXXXXXXXXXXXXXXXXXXEGRNLSISEKPETLDSNVITPGTGFMGALSVALQYYIH 142
                                 EGR L+  EK E +DSNVITPGT FM  LS ALQYYI 
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180

Query: 141 LRLNNTPGWQSIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTR 1
           LRLN+T GWQS+K+ILSDSNVPGEGEHKIMSYIRLQRNLPGF+PNTR
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTR 227


>gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
          Length = 990

 Score =  330 bits (846), Expect = 2e-88
 Identities = 163/227 (71%), Positives = 177/227 (77%), Gaps = 4/227 (1%)
 Frame = -3

Query: 669 MGVPAFYRWLADRYPLSIADVIEEEP----PRGAATVDASRPNPNGMEFDNLYLDMNGII 502
           MGVPAFYRWLADRYPL+++D  EEEP    P     VD  RPNPNG+EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60

Query: 501 HPCFHPDGRPPPTTYDDVFRSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSXXX 322
           HPCFHP+GRP PTTYD+VF+SIFDYIDHLFGL+RPRKLLYMAIDGVAPRAKMNQQRS   
Sbjct: 61  HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120

Query: 321 XXXXXXXXXXXXXXXXXXXXXXEGRNLSISEKPETLDSNVITPGTGFMGALSVALQYYIH 142
                                 EGR L+  EK E +DSNVITPGT FM  LS ALQYYI 
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180

Query: 141 LRLNNTPGWQSIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTR 1
           LRLN+T GWQS+K+ILSDSNVPGEGEHKIMSYIRLQRNLPGF+PNTR
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTR 227


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  330 bits (846), Expect = 2e-88
 Identities = 165/228 (72%), Positives = 176/228 (77%), Gaps = 5/228 (2%)
 Frame = -3

Query: 669 MGVPAFYRWLADRYPLSIADVIEEEPPRGAATVDASRPNPNGMEFDNLYLDMNGIIHPCF 490
           MGVPAFYRWLADRYPLSIADV+EEEP  G+  VD S+PNPNGMEFDNLYLDMNGIIHPCF
Sbjct: 1   MGVPAFYRWLADRYPLSIADVVEEEPSVGSGAVDVSKPNPNGMEFDNLYLDMNGIIHPCF 60

Query: 489 HPDGRPPPTTYDDVFRSIFDYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSXXXXXXX 310
           HPDG+  PTTY+DVF+SIFDYIDH+F LVRPRKLLY+AIDGVAPRAKMNQQRS       
Sbjct: 61  HPDGKSAPTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAK 120

Query: 309 XXXXXXXXXXXXXXXXXXEG-----RNLSISEKPETLDSNVITPGTGFMGALSVALQYYI 145
                             E      + LS   KPET DSNVITPGT FMG LSVALQYYI
Sbjct: 121 DAAEKDAAEAEAEIERLREEFEGEMKLLSSKVKPETYDSNVITPGTPFMGVLSVALQYYI 180

Query: 144 HLRLNNTPGWQSIKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTR 1
             RLN  PGW++ KVILSDSNVPGEGEHKIM YIRLQRNLPGFNPNTR
Sbjct: 181 QTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTR 228


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