BLASTX nr result

ID: Dioscorea21_contig00015329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015329
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum]               165   4e-39
ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 ...   164   7e-39
ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 ...   164   7e-39
ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 ...   163   1e-38

>ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|222839068|gb|EEE77419.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = -1

Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95
           FFV+TKK+VRVYDLVK KLIKKLE G+RE+SSISIHP GDNVIVGS+EGK+CWFDMDLSS
Sbjct: 422 FFVSTKKNVRVYDLVKQKLIKKLETGLREVSSISIHPAGDNVIVGSREGKLCWFDMDLSS 481

Query: 94  QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2
           +PYK LK HPKDITNVAFHRSYPLFASCSDD
Sbjct: 482 KPYKVLKCHPKDITNVAFHRSYPLFASCSDD 512


>gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum]
          Length = 412

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/91 (83%), Positives = 85/91 (93%)
 Frame = -1

Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95
           FFVATKK+VRVYDL+K KLIKKLE  +RE+SSI++HP GDN+IVGSKEGK+CWFDMDLSS
Sbjct: 259 FFVATKKNVRVYDLLKQKLIKKLETQLREVSSIAVHPAGDNLIVGSKEGKLCWFDMDLSS 318

Query: 94  QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2
           +PYKTLK HPKDIT VAFHRSYPLFASCSDD
Sbjct: 319 KPYKTLKCHPKDITKVAFHRSYPLFASCSDD 349


>ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 718

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/91 (82%), Positives = 83/91 (91%)
 Frame = -1

Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95
           FFV TKK VRVYDL+KTK+IKKL+ G+RE SSI++HPGGDN+IVGSKEGKMCWFDMDLSS
Sbjct: 565 FFVCTKKSVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSS 624

Query: 94  QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2
           +PYK LK HPKDI NV FHRSYPLFASCSDD
Sbjct: 625 KPYKILKCHPKDINNVIFHRSYPLFASCSDD 655


>ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 716

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/91 (82%), Positives = 83/91 (91%)
 Frame = -1

Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95
           FFV TKK VRVYDL+KTK+IKKL+ G+RE SSI++HPGGDN+IVGSKEGKMCWFDMDLSS
Sbjct: 563 FFVCTKKSVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSS 622

Query: 94  QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2
           +PYK LK HPKDI NV FHRSYPLFASCSDD
Sbjct: 623 KPYKILKCHPKDINNVIFHRSYPLFASCSDD 653


>ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Vitis
           vinifera]
          Length = 691

 Score =  163 bits (413), Expect = 1e-38
 Identities = 72/91 (79%), Positives = 85/91 (93%)
 Frame = -1

Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95
           FF++TKK+VRVYDL+K KL+KKLE G+RE+SSI++HP GDNVIVGS+EGK+CWFDMDLSS
Sbjct: 565 FFISTKKNVRVYDLLKQKLVKKLETGLREVSSIAVHPAGDNVIVGSREGKLCWFDMDLSS 624

Query: 94  QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2
           QPY+ LK HPKDITNVAFH SYPLFA+CSDD
Sbjct: 625 QPYRILKCHPKDITNVAFHHSYPLFATCSDD 655


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