BLASTX nr result
ID: Dioscorea21_contig00015329
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00015329 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum] 165 4e-39 ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 ... 164 7e-39 ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 ... 164 7e-39 ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 ... 163 1e-38 >ref|XP_002328770.1| predicted protein [Populus trichocarpa] gi|222839068|gb|EEE77419.1| predicted protein [Populus trichocarpa] Length = 573 Score = 170 bits (430), Expect = 1e-40 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -1 Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95 FFV+TKK+VRVYDLVK KLIKKLE G+RE+SSISIHP GDNVIVGS+EGK+CWFDMDLSS Sbjct: 422 FFVSTKKNVRVYDLVKQKLIKKLETGLREVSSISIHPAGDNVIVGSREGKLCWFDMDLSS 481 Query: 94 QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2 +PYK LK HPKDITNVAFHRSYPLFASCSDD Sbjct: 482 KPYKVLKCHPKDITNVAFHRSYPLFASCSDD 512 >gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum] Length = 412 Score = 165 bits (417), Expect = 4e-39 Identities = 76/91 (83%), Positives = 85/91 (93%) Frame = -1 Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95 FFVATKK+VRVYDL+K KLIKKLE +RE+SSI++HP GDN+IVGSKEGK+CWFDMDLSS Sbjct: 259 FFVATKKNVRVYDLLKQKLIKKLETQLREVSSIAVHPAGDNLIVGSKEGKLCWFDMDLSS 318 Query: 94 QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2 +PYKTLK HPKDIT VAFHRSYPLFASCSDD Sbjct: 319 KPYKTLKCHPKDITKVAFHRSYPLFASCSDD 349 >ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max] Length = 718 Score = 164 bits (415), Expect = 7e-39 Identities = 75/91 (82%), Positives = 83/91 (91%) Frame = -1 Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95 FFV TKK VRVYDL+KTK+IKKL+ G+RE SSI++HPGGDN+IVGSKEGKMCWFDMDLSS Sbjct: 565 FFVCTKKSVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSS 624 Query: 94 QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2 +PYK LK HPKDI NV FHRSYPLFASCSDD Sbjct: 625 KPYKILKCHPKDINNVIFHRSYPLFASCSDD 655 >ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max] Length = 716 Score = 164 bits (415), Expect = 7e-39 Identities = 75/91 (82%), Positives = 83/91 (91%) Frame = -1 Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95 FFV TKK VRVYDL+KTK+IKKL+ G+RE SSI++HPGGDN+IVGSKEGKMCWFDMDLSS Sbjct: 563 FFVCTKKSVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSS 622 Query: 94 QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2 +PYK LK HPKDI NV FHRSYPLFASCSDD Sbjct: 623 KPYKILKCHPKDINNVIFHRSYPLFASCSDD 653 >ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Vitis vinifera] Length = 691 Score = 163 bits (413), Expect = 1e-38 Identities = 72/91 (79%), Positives = 85/91 (93%) Frame = -1 Query: 274 FFVATKKHVRVYDLVKTKLIKKLEAGVREISSISIHPGGDNVIVGSKEGKMCWFDMDLSS 95 FF++TKK+VRVYDL+K KL+KKLE G+RE+SSI++HP GDNVIVGS+EGK+CWFDMDLSS Sbjct: 565 FFISTKKNVRVYDLLKQKLVKKLETGLREVSSIAVHPAGDNVIVGSREGKLCWFDMDLSS 624 Query: 94 QPYKTLKIHPKDITNVAFHRSYPLFASCSDD 2 QPY+ LK HPKDITNVAFH SYPLFA+CSDD Sbjct: 625 QPYRILKCHPKDITNVAFHHSYPLFATCSDD 655