BLASTX nr result

ID: Dioscorea21_contig00015327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015327
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   122   2e-26
ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   120   9e-26
ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25
ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containin...   117   1e-24
ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arab...   117   1e-24

>ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 32-like [Glycine max]
          Length = 473

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/114 (52%), Positives = 70/114 (61%), Gaps = 9/114 (7%)
 Frame = -3

Query: 315 MELYGRGSGSGIPRP---------DPDTGLEESMWQLGLGGPGDVAVVLAYPERPGEPDC 163
           M+LYGRG    +  P           DTGLEESMW L LGG G+     +YPERPG P+C
Sbjct: 1   MDLYGRGPARNVHNPVNQPEWRSPGTDTGLEESMWHLTLGGGGE-----SYPERPGVPNC 55

Query: 162 AYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFLRTGT 1
            Y+MRTG CGYG RCRYNHP +             DYPER+GEP CQY+L+TGT
Sbjct: 56  VYYMRTGVCGYGGRCRYNHPHD-RAAVVAAVRVTGDYPERLGEPPCQYYLKTGT 108



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = -3

Query: 192 YPERPGEPDCAYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFL 13
           YP+RPGEPDC Y++RTG C +G  C+Y+HP++            V  P R G   C ++L
Sbjct: 293 YPKRPGEPDCQYYLRTGDCKFGLACQYHHPQD--HVVAQPLLSPVGLPLRPGLQPCAFYL 350

Query: 12  RTG 4
           + G
Sbjct: 351 QNG 353


>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 32-like [Glycine max]
          Length = 494

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/114 (56%), Positives = 73/114 (64%), Gaps = 9/114 (7%)
 Frame = -3

Query: 315 MELYGRG---SGSGIPR------PDPDTGLEESMWQLGLGGPGDVAVVLAYPERPGEPDC 163
           M+LYGRG   +GS          P  DTGLEESMW L LGG G+     +YPERPG P+C
Sbjct: 1   MDLYGRGQARNGSNPVNQPEWRSPGTDTGLEESMWHLTLGG-GE-----SYPERPGVPNC 54

Query: 162 AYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFLRTGT 1
            Y+MRTG CGYG RCRYNHPR+             DYPERVGEP CQY+L+TGT
Sbjct: 55  VYYMRTGVCGYGSRCRYNHPRD-RAAVAAAVRVTGDYPERVGEPPCQYYLKTGT 107



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%)
 Frame = -3

Query: 192 YPERPGEPDCAYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFL 13
           +PERPGEP+C Y++RTG C +G  CRY+HPR+            V  P R G   C ++L
Sbjct: 293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRD--HIVARPLLSPVGLPLRPGVQPCAFYL 350

Query: 12  RTG 4
           + G
Sbjct: 351 QNG 353


>ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Glycine max]
          Length = 339

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/111 (54%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
 Frame = -3

Query: 315 MELYGRGSGSGIPRP------DPDTGLEESMWQLGLGGPGDVAVVLAYPERPGEPDCAYF 154
           M+LYGR        P        DT LEESMW L LGG      V +YPERPG P+C Y+
Sbjct: 1   MDLYGRAPARNGSNPLNQPEWGTDTALEESMWHLTLGG------VESYPERPGVPNCVYY 54

Query: 153 MRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFLRTGT 1
           MRTG CGYGDRCR+NHPR+             DYPERVGEP CQY+L+TGT
Sbjct: 55  MRTGVCGYGDRCRFNHPRD-RAAVAAAVRATGDYPERVGEPPCQYYLKTGT 104



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = -3

Query: 192 YPERPGEPDCAYFMRTGTCGYGDRCRYNHPRE 97
           +PERPGEP+C Y++RTG C +G  CRY+HPR+
Sbjct: 290 FPERPGEPECQYYLRTGDCKFGLACRYHHPRD 321


>ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           isoform 1 [Brachypodium distachyon]
          Length = 472

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
 Frame = -3

Query: 303 GRGSGSGIPRPDPDTGLEESMWQLGLGGPGDVAVVLAYPERPGEPDCAYFMRTGTCGYGD 124
           G G G G  R D DTGLEESMW+LGLGG G+ A  L  PERPGE +C Y++RTG+C YG+
Sbjct: 16  GGGGGEGGGRADADTGLEESMWRLGLGGGGEAAPRL--PERPGEANCIYYLRTGSCSYGE 73

Query: 123 RCRYNHPR-----EXXXXXXXXXXXXVDYPERVGEPVCQYFLRTGT 1
            CRYNHPR     E            V+YPER G+P+C+Y+++ GT
Sbjct: 74  SCRYNHPRDRAAAEFNGGARTTIAMGVEYPERPGQPLCEYYMKNGT 119



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/138 (28%), Positives = 57/138 (41%)
 Frame = -3

Query: 417 PLRVLCSTSIGPQASSATVLQQSRAVWNLNVAIPMELYGRGSGSGIPRPDPDTGLEESMW 238
           P  V+      P  SS   L  +    N+       L  +G  S +        L  S W
Sbjct: 234 PSAVIPMQGWNPYMSSMNQLASAGGQQNVQAGPLYGLSHQGPSSSVAYGSNYAPLPSSTW 293

Query: 237 QLGLGGPGDVAVVLAYPERPGEPDCAYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXV 58
                 P     V A+PERPG+P+C ++M+TGTC +G  C+Y+HP+             +
Sbjct: 294 ------PSSNKQV-AFPERPGQPECHHYMKTGTCKFGATCKYSHPQYLSAPNSNCMLSPL 346

Query: 57  DYPERVGEPVCQYFLRTG 4
             P R G   C Y+ + G
Sbjct: 347 GLPIRPGAQQCVYYSQHG 364


>ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
           lyrata] gi|297317659|gb|EFH48081.1| hypothetical protein
           ARALYDRAFT_488738 [Arabidopsis lyrata subsp. lyrata]
          Length = 474

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 9/114 (7%)
 Frame = -3

Query: 315 MELYGRGSGSGIPRPDP---------DTGLEESMWQLGLGGPGDVAVVLAYPERPGEPDC 163
           ME YG G+G    R DP         +TG+E SMW+LGL G G      ++PERP EPDC
Sbjct: 1   MERYG-GAGEDESRSDPSHEWSAPGTETGIEASMWRLGLRGAGGGGE--SFPERPDEPDC 57

Query: 162 AYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXXVDYPERVGEPVCQYFLRTGT 1
            YF+RTG CGYG RCR+NHPR              ++PER+G+PVCQ+F+RTGT
Sbjct: 58  IYFLRTGVCGYGSRCRFNHPRNRAPVLGSLRTEAGEFPERMGQPVCQHFMRTGT 111



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
 Frame = -3

Query: 225 GGPGDVAV-----VLAYPERPGEPDCAYFMRTGTCGYGDRCRYNHP 103
           GG GD         + +P RPGE +C+YFMRTG C +G  CRY+HP
Sbjct: 127 GGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHP 172



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/79 (34%), Positives = 38/79 (48%)
 Frame = -3

Query: 240 WQLGLGGPGDVAVVLAYPERPGEPDCAYFMRTGTCGYGDRCRYNHPREXXXXXXXXXXXX 61
           +Q G    G       +P+RP +P+C YFMRTG C +G  CR++HP E            
Sbjct: 281 YQSGPSSTGVTNKEQTFPQRPEQPECQYFMRTGDCKFGSSCRFHHPME-AASPEASTLSH 339

Query: 60  VDYPERVGEPVCQYFLRTG 4
           +  P R G   C +F + G
Sbjct: 340 IGLPLRPGAVPCTHFAQHG 358


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