BLASTX nr result

ID: Dioscorea21_contig00015321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015321
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    62   6e-08
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...    59   5e-07
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]    57   1e-06
ref|XP_004170164.1| PREDICTED: uncharacterized protein LOC101232...    57   2e-06
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    56   3e-06

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/57 (47%), Positives = 36/57 (63%)
 Frame = -2

Query: 386  LQTPASVLKQREVLKSGKVFREILVQWKGQSSEDATWEDKEDFCNTFPDFTLEDKSD 216
            L  PA++   R +L+ GK  ++ILVQW     E+ATWED   FC  +PD+ LEDK D
Sbjct: 1260 LLVPAAICAVRTILRQGKEVQQILVQWTASDPENATWEDFVAFCRLYPDYHLEDKVD 1316


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/53 (49%), Positives = 34/53 (64%)
 Frame = -2

Query: 374 ASVLKQREVLKSGKVFREILVQWKGQSSEDATWEDKEDFCNTFPDFTLEDKSD 216
           A+V   R +L+ GK  ++ILVQW     E+ATWED   FC  +PD+ LEDK D
Sbjct: 650 AAVCAVRTILRQGKEVQQILVQWTASDPENATWEDFVAFCRLYPDYHLEDKVD 702


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/60 (43%), Positives = 34/60 (56%)
 Frame = -2

Query: 377 PASVLKQREVLKSGKVFREILVQWKGQSSEDATWEDKEDFCNTFPDFTLEDKSDIREGAI 198
           P  ++  R   K GK F E LV+WK    EDATWE+  +  + FPD  LEDK  ++ G I
Sbjct: 546 PXEIIDTRWFXKGGKFFEECLVKWKNLPVEDATWENAXELHDRFPDLNLEDKVPVKVGGI 605


>ref|XP_004170164.1| PREDICTED: uncharacterized protein LOC101232729 [Cucumis sativus]
          Length = 262

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -2

Query: 344 KSGKVFREILVQWKGQSSEDATWEDKEDFCNTFPDFTLEDKSDI-REGAIVAEAGHQGCN 168
           + GK   E+L+ WKGQS  +ATWE+ +DF  +FPDF LEDK  + RE  +     HQ   
Sbjct: 177 QDGKGVWEVLISWKGQSRHEATWENYDDFHQSFPDFHLEDKVKLDRECNVRPPIIHQYSR 236

Query: 167 QDDMLVRRSARR-VRGESSTK 108
           +  M  +R  +  V+  + TK
Sbjct: 237 RRKMTGKREGKELVKNVNGTK 257


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = -2

Query: 377  PASVLKQREVLKSGKVFREILVQWKGQSSEDATWEDKEDFCNTFPDFTLEDKSDIREGAI 198
            P +VL +R +   G+   ++LV W GQ  E+ATWED     + FP+F LEDK+ +  G+I
Sbjct: 1207 PETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAMLSGGSI 1266

Query: 197  VAEA 186
            V  A
Sbjct: 1267 VRTA 1270


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