BLASTX nr result
ID: Dioscorea21_contig00015300
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00015300 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] g... 84 1e-16 gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 83 2e-16 ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group] g... 61 8e-08 emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis] 60 1e-07 emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera] 59 4e-07 >ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] gi|255677790|dbj|BAH93941.1| Os07g0500000 [Oryza sativa Japonica Group] Length = 662 Score = 84.0 bits (206), Expect(2) = 1e-16 Identities = 37/43 (86%), Positives = 41/43 (95%) Frame = -2 Query: 175 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDESRPYFYSFAAQ 47 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDE++P+FYS +Q Sbjct: 353 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFFYSSTSQ 395 Score = 27.3 bits (59), Expect(2) = 1e-16 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -1 Query: 215 PHECTKLTAQSIECL 171 P E TKLTAQS+EC+ Sbjct: 339 PRERTKLTAQSVECV 353 >gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] gi|78708691|gb|ABB47666.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1682 Score = 82.8 bits (203), Expect(2) = 2e-16 Identities = 37/43 (86%), Positives = 40/43 (93%) Frame = -2 Query: 175 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDESRPYFYSFAAQ 47 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDE++P+FYS Q Sbjct: 575 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFFYSSTNQ 617 Score = 27.3 bits (59), Expect(2) = 2e-16 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -1 Query: 215 PHECTKLTAQSIECL 171 P E TKLTAQS+EC+ Sbjct: 561 PRERTKLTAQSVECV 575 >ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group] gi|255671092|dbj|BAH91807.1| Os02g0616666 [Oryza sativa Japonica Group] Length = 1228 Score = 61.2 bits (147), Expect = 8e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = -2 Query: 154 EHKGYRCYDPSARRIRISRDVTFDESRPYF 65 EHKGYRCYDP ARR+RISR VTFDESRPY+ Sbjct: 372 EHKGYRCYDPVARRMRISRHVTFDESRPYY 401 >emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis] Length = 1385 Score = 60.5 bits (145), Expect = 1e-07 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = -2 Query: 166 GYSLEHKGYRCYDPSARRIRISRDVTFDESRPYF 65 G S +HKGYRC+DP RR+RISRDVTFDESRP++ Sbjct: 727 GNSADHKGYRCWDPVGRRMRISRDVTFDESRPFY 760 >emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera] Length = 767 Score = 58.9 bits (141), Expect = 4e-07 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = -2 Query: 175 VFLGYSLEHKGYRCYDPSARRIRISRDVTFDESRPYFYSFAAQ 47 VFLGYS KGY+CY+PSAR+ IS DVTF E++P+F+ + Q Sbjct: 61 VFLGYSSTQKGYKCYNPSARKFYISADVTFTENKPFFHKSSLQ 103